Canis lupus familiaris (dog): 477045
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Entry
477045 CDS
T01007
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa05200
Pathways in cancer
cfa05222
Small cell lung cancer
cfa05223
Non-small cell lung cancer
cfa05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
477045 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
477045 (RARB)
05222 Small cell lung cancer
477045 (RARB)
05223 Non-small cell lung cancer
477045 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
477045 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cfa03310
]
477045 (RARB)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
477045 (RARB)
Nuclear receptors [BR:
cfa03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
477045 (RARB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
477045
NCBI-ProteinID:
XP_003433175
Ensembl:
ENSCAFG00000005727
VGNC:
45352
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Position
23:complement(18204235..18714201)
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AA seq
455 aa
AA seq
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MTTSSHACPVPAVNGHMTHYPAAPYPLLFPPVIGGLSLPPLHGLHGHPPPSGCSTPSPAT
IETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
IYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEM
TAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIV
EFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALK
IYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGH
EPLTPSSSGNPAEHSPSISPSSVENSGVSQSPLVQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagtagccacgcatgtcccgtcccggcagtgaatggacacatgactcactat
ccagctgcaccctacccattgctctttccaccagtcattggaggactttccctgcctccc
ctccatggccttcacggccaccctcctccaagtggatgcagtaccccatcacctgcaacg
attgaaacacagagcaccagctccgaggaactggtcccaagccctccgtctccacttcct
ccccctcgtgtgtacaaaccctgcttcgtctgccaggacaaatcatcggggtaccactat
ggggtcagcgcctgtgagggctgtaaggggtttttccgcagaagtattcagaagaacatg
atttacacttgtcaccgagataagaactgtgttattaataaagtcaccaggaatcgatgc
cagtactgtcgactccagaagtgctttgaagtgggaatgtccaaagaatctgtcaggaat
gataggaacaagaagaagaaggagccttcgaagcaggaatgcacagaaagctatgaaatg
acagctgagctggacgatctcacggagaagatccgcaaagcccaccaggaaaccttcccc
tcactctgccagctgggcaaatacaccacgaattccagtgctgaccatcgagtccgactg
gacctgggcctctgggacaaattcagtgaactggccaccaagtgcattattaagattgtg
gagtttgctaaacgtctgccaggcttcaccggcttgaccatcgcggaccaaatcaccctg
ctgaaggccgcctgcctggacattctgattcttagaatttgcaccaggtataccccagaa
caagacaccatgactttttcagatggccttaccctaaatcgaactcagatgcacaatgct
ggatttggtcctctgactgaccttgtgttcacctttgccaaccagctcctgcctttggaa
atggatgacacagaaacaggccttctcagtgccatctgcttaatctgtggagaccgccag
gaccttgaggaaccaacaaaagtagataagctacaggaaccactgctggaagcactaaaa
atttatatcagaaagagacgacccagcaagcctcacatgtttccaaagatcttaatgaaa
atcacagatctccgcagcatcagtgctaaaggtgcagaacgtgtaattaccttgaaaatg
gaaattcctggatcaatgccacctctcattcaggaaatgctggagaattctgaaggacat
gaacccttgaccccaagttcaagtgggaacccagcggagcacagtcccagcatctcacct
agctcagtggaaaacagcggtgtcagtcaatcaccactggtgcaataa
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