Canis lupus familiaris (dog): 477088
Help
Entry
477088 CDS
T01007
Symbol
COPB2
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
477088 (COPB2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfa04147
]
477088 (COPB2)
Membrane trafficking [BR:
cfa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
477088 (COPB2)
Exosome [BR:
cfa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
477088 (COPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Helicase_dom4_arc
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
477088
NCBI-ProteinID:
XP_005634562
Ensembl:
ENSCAFG00000007602
VGNC:
39505
UniProt:
A0A8C0QHX9
A0A8I3S666
LinkDB
All DBs
Position
23:complement(35524048..35592583)
Genome browser
AA seq
906 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDD
MLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLG
REEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKE
KKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILKYLSEKVLAAQETHEGVTEDGIEDAFEVLGEIQEIVKTGLWVGDCFIYTSSV
NRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVNKLAEGAE
RDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKV
NQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAK
GFQPSRSAAQQELDGKPASPTPVIVTSHTANKEEKSLVELEVDLDNLELEDIDTTDINLD
EDILDD
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgacttgatataaagagaaagttaactgctcgatcggatcgagttaagagt
gtggatttgcatcctacagagccatggatgttggcaagtctttacaatggcagtgtgtgc
gtttggaatcatgaaacacagacattggtgaaaacatttgaagtgtgtgatcttcctgtt
cgagctgcaaagtttgttgcaagaaagaattgggttgtgacaggagcggatgacatgcag
attagagtgttcaattacaatactttggagagagttcatatgtttgaagcacactcagac
tatattcgttgtattgctgttcatccaacccagcctttcattctgactagcagcgatgac
atgcttattaagctctgggactgggataaaaaatggtcctgctcacaagtgtttgaagga
cacactcattatgtcatgcagattgtgatcaatcccaaagataacaatcagtttgccagt
gcatctttggacaggaccatcaaggtttggcaattgggttcttcctcaccaaacttcact
ctggaaggacatgagaaaggcgtgaattgcatcgattactacagtggtggtgataaacca
tacctcatttcaggtgcagatgaccgtcttgttaaaatatgggactatcagaataagaca
tgtgtacagacactggagggacatgctcaaaatgtgtcttgtgccagttttcatcctgag
ttgccaatcatcatcacaggttcagaagacggaaccgtgcgtatttggcattccagcacg
taccgccttgagagcacattgaattatggaatggagagggtgtggtgtgtggccagtctg
agagggtccaacaatgttgctttgggctatgatgaagggagcatcattgtgaagcttggt
cgggaggaacctgccatgtccatggatgccaatggaaagataatttgggccaagcattca
gaagtccagcaggccaacctaaaagcaatgggagatgctgaaattaaagatggagaaaga
ctgccattagcagtcaaggacatgggcagttgtgaaatatatccccagactattcagcac
aatcctaatggacggtttgttgtggtgtgtggcgatggtgagtatattatctacacagca
atggcgttgagaaacaagagctttggatctgcccaggagtttgcatgggcccatgattct
tcagaatatgcaataagagagagcaacagtgttgtaaagatatttaagaactttaaggaa
aaaaaatcatttaaaccagattttggagctgaaagtatctatggaggcttcttattggga
gtcagatctgtaaatggcttagctttctatgactgggacaatacagaactcatacgcaga
attgaaattcagcccaaacacattttctggtctgactctggagagctggtctgtattgcc
accgaggagtcattttttatcttgaagtatctgtctgaaaaagtcttggctgcacaggaa
acacatgagggagttactgaagatggcattgaagacgcctttgaggttcttggtgagatt
caggaaattgtgaaaacagggctgtgggtaggcgattgcttcatttacacaagttctgtg
aacagattaaattattatgttggaggagaaatagtcaccattgcccacttggacaggaca
atgtatctcctgggctatattcctaaagacaacaggctttatctgggtgataaagaactg
aacattgttagctattctctgctggtttccgtgctggaataccagacagctgtcatgaga
agggactttagcatggctgataaggttcttcctaccattccaaaagaacagaggaccaga
gttgcacactttctggaaaagcaaggcttcaagcagcaagctcttacagtatccacagat
ccggagcatcgctttgaacttgctctacagcttggagaactgaaaatcgcataccaatta
gcagtagaagcagagtcagaacaaaagtggaaacaacttgccgaacttgccattagtaaa
tgtcagtttggccttgcccaggagtgcctgcaccatgcacaggattatggaggcctgttg
ctcttggccactgcctctggaaatgctagtatggtgaacaaactagcagagggtgcagag
agagatggcaagaataacgtggcattcatgagctactttttacagggcaagctagatgcc
tgcctggaactcttgattagaacaggtcgattgcctgaagccgccttcctagcccggact
tacttacccagtcaggtttcaagggtggtgaaactctggagagaaaatctttcaaaagtc
aatcagaaagcagcagaatcccttgcagatccaacagaatatgaaaacctttttcctgga
ttaaaagaagcctttgttgtagaagaatgggtgaaggaaacacatgctgatctgtggcca
gccaagcagtacccacttgtcacgccaaatgaagaaagaaatgttatggaagaggcaaaa
ggctttcagccctcaagatctgcagctcaacaggaacttgatgggaaacctgcttctcct
actccagtaattgtcacctcccacacagccaacaaagaagaaaagagtttagtcgaactg
gaagtagatctggataatttagaattagaagatattgacacaacagacatcaacctggat
gaagatattttggatgattga
DBGET
integrated database retrieval system
