KEGG   Canis lupus familiaris (dog): 477106
Entry
477106            CDS       T01007                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X4
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
cfa  Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cfa04121]
    477106 (HLTF)
   03400 DNA repair and recombination proteins [BR:cfa03400]
    477106 (HLTF)
Enzymes [BR:cfa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     477106 (HLTF)
Ubiquitin system [BR:cfa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    477106 (HLTF)
DNA repair and recombination proteins [BR:cfa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    477106 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 DEAD RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 HDA2-3 zf-ANAPC11 zf-Nse zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 477106
NCBI-ProteinID: XP_005634612
Ensembl: ENSCAFG00000008276
VGNC: 50301
LinkDB
Position
23:complement(43734282..43783354)
AA seq 1006 aa
MSWMFKRDPVWKYLQTVQYGAHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSILF
GTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALA
YIMDNKLAQIEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGF
SLESSWGSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAIETPL
LPHQKQALAWMVSRENSKDLPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGKPLPVERIKKNQMKKECNVNDQSMKLGGNNASEKADGLIKGSRCS
GEPSISDVKGKKKYTKSELSSSRPKRRKTAVQYNESSDSEENETSELPQKMKGKLKNVQS
ETKRVKGSSKVKEDSEFACALISSTPATKRRMLKKGASAVEGSKKTDIEDRPRTTLIICP
LSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIRDPALLSKQDIVLTTYNILTHDYGTKGD
SPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSLLSFL
KLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIKGKPVLELPERKV
FIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHTHLLT
NAGSSSGPSGNDTPEELRKKLIRKMKLILSSGSDEECAICLDSLTVPVITHCAHVFCKPC
ICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELACDTEKKSNTEWTSSSKINALMHALI
DLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQNTEAG
SPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVK
DSVEENMLKIQNTKRELAAGAFGTKKTNANEMKQAKINEIRTLIDL
NT seq 3021 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagagatcctgtttggaagtacttgcagactgtccaatatgga
gcccatggaaattttccacgcctctcatatccaactttctttccccgttttgagttccaa
gatattatacctccagacgatttcctaacaagtgatgaagagctagattcaattttattt
ggaactttgagaggccatgtagttggactacgctattacacaggagtagttaataataat
gaaatggttgcattacaacgagagcctaataacccctatgataagaacgcaattaaagta
aacaatgtgaatggaaatcaggttggccatttaaagaaagatcttgcagctgctttggcc
tatatcatggacaacaaattggcacagattgaaggagttgttccttttggtgcaaacaat
gcttttaccatgcccctccatatgactttttggggaaaagaagaaaatagaaaagcggtt
ttagatcagttgaagaaacatggatttaaattgggtcctgcaccaaaaactttaggattc
agtttagaaagtagttggggctctggaagagctggaccaagctatagtatgccagttcat
gctgcagtacagatgacaactgaacagcttaaaacagaatttgacaaattgtttgaagat
ttaaaagaagatgataaaactcatgaaatggaaccagccgaggctattgaaacaccattg
cttccacatcaaaaacaagctctagcttggatggtttcacgggaaaacagtaaagacctt
ccaccattttgggaacagcgaaatgatttatactataacacgataacaaatttttctgag
aaggaccgaccagaaaatgtccatggaggaattttagctgatgatatgggtttgggcaaa
actctgacagccattgcagtaattcttaccaacttccatgatggcaaacctcttcctgtt
gaaagaattaaaaaaaatcaaatgaagaaggagtgtaatgttaacgatcaatctatgaaa
cttggaggaaacaatgccagtgaaaaggcagatggactaatcaaaggatctagatgtagt
ggagaacccagtatttcagatgtcaagggaaagaaaaagtataccaaatcagaattgtct
agctcccgccccaaaagaagaaaaactgctgtccagtacaatgaaagcagtgattcagag
gaaaatgaaacaagtgaattgccacagaaaatgaaaggcaaactaaaaaatgtacagtct
gagactaaaagagtaaaaggatcttctaaagttaaagaagattcagagtttgcatgtgca
cttatttcatctacccctgcaacaaaaaggagaatgttgaaaaagggagcatctgcagtg
gagggttcaaagaaaactgatattgaagacagaccaaggacaacactgatcatctgtcca
ctttctgtgttaagcaactggattgaccagtttggacaacatataaaatcagatgtacac
ttgaatttttatgtttattatggtcctgatcgtataagagacccagctttgctttcaaaa
caggatattgttttgactacatacaacattttaactcatgactatggaactaaaggtgat
agtccattacatagcataaggtggctcagagtgatcctggatgaaggacatgccattcga
aatccaaatgctcagcagacaaaagctgtacttgatttagaagcagaaagaagatgggta
ttaacaggtactccgattcagaattctttaaaggacttgtggtctcttctttccttttta
aaacttaaaccatttcttgatagagaatggtggcatagaacaatacagcgtcctgtcaca
atgggagatgaaggaggacttaggcgtttgcaatccctgattaaaaatattactcttaga
agaacaaagacaagcaaaattaaaggcaaacctgttttggagttaccagaacgtaaagta
tttattcagcacattacactttcagatgaagagagaaaaatttatcagtctgtgaaaaat
gaaggcagagctactattggaaggtattttaatgaagggactgtccttgcacactatgcg
gatgtcctggggcttttgcttagactgcggcagatttgttgtcatactcaccttcttaca
aatgcagggtcttccagtggtccctcaggaaatgatacacctgaagaactacgaaagaag
ttaataaggaagatgaagttaattctgagctcaggttctgatgaagaatgtgcaatttgc
ttggattctttaacggttcctgtcataacacattgtgcacatgtcttttgtaaaccctgt
atttgccaagtcattcagaatgagcagccacatgctaaatgtcctttatgcagaaatgat
atacatggagacaatttattagaatgtcctccggaagaactggcatgtgacactgagaaa
aagtctaatacagaatggacatccagttcgaagattaatgctctaatgcatgcactgatt
gacttaagaaagaagaaccccaacataaaaagtttagttgtttctcagtttacaacattc
ctgtctttaatagaaacaccgctcagagcctctggatttgtgtttactcgtttggatggt
tccatggctcagaagaaaagagttgaatcaattcagtgttttcaaaacactgaagcagga
tctccaactataatgcttctgtccttaaaagcaggtggagttggtttgaatctttctgca
gcttctcgagtgtttttaatggatccagcctggaatccggctgctgaagatcagtgcttt
gacagatgccatagacttggccagaagcaagaagttatcatcacaaaattcattgtaaag
gattctgttgaagaaaatatgctgaaaatacaaaacacaaaaagagaacttgctgctgga
gcctttggaactaaaaagacaaatgctaatgaaatgaaacaagctaaaattaatgaaatc
agaactttaattgatttataa

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