Canis lupus familiaris (dog): 477216
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Entry
477216 CDS
T01007
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X4
KO
K13091
RNA-binding protein 23/39
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
477216 (RBM39)
Spliceosome [BR:
cfa03041
]
Common components
Common spliceosomal components
General mRNP proteins
477216 (RBM39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
RSRP
IHO1
Motif
Other DBs
NCBI-GeneID:
477216
NCBI-ProteinID:
XP_003433300
Ensembl:
ENSCAFG00000008327
VGNC:
45420
UniProt:
A0A8C0S555
A0A8I3S3C0
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All DBs
Position
24:complement(24263987..24293214)
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AA seq
508 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYRRRSRSKSPFRKDKSPVREPI
DNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFV
DVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNIT
EDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMK
VGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMS
GSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGW
DTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMIT
AAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgcaaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagcaaaagtaaggaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagtcgcgaaaggaagcgaagtaggagcaaagaaaggaga
cggagccgctcaagaagtcgagatcgcagattcagaggccgctacagaagtccttacaga
cgacgctcccgaagcaaaagtccattcagaaaagacaagagccccgtgagggaacctatt
gataatctaactcctgaggaaagagatgcaaggacagttttttgcatgcagctggcagca
agaattcggccaagggatttggaagagtttttctctacagtaggcaaggttcgagatgtg
agaatgatttctgatcgaaattcaagacgttccaaaggaattgcatatgtggagtttgtg
gatgttagctcagtgcctctagcaataggattaactggccaacgtgttttaggtgtgcca
atcatagtacaagcatcacaggcagaaaaaaacagagctgcagcaatggcaaacaatcta
caaaagggaagtgctggacctatgaggctttatgtgggctcattacactttaacataact
gaagatatgcttcgggggatctttgagccttttgggagaattgaaagtatccaactcatg
atggatagtgaaacaggtcgatctaagggatatggatttattacgttttccgattcagaa
tgtgccaagaaggctttggaacaacttaatggatttgagttagcaggaagaccaatgaaa
gttggtcatgttactgaacgtacagatgcttccagtgctagctcatttttggacagtgat
gaactggaaaggactggaattgatttgggaacaactggtcgtctccaattaatggcaagg
cttgcagaaggtacaggtttgcagattccaccagcagcacagcaggctctacaaatgagt
ggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaaacaaga
ctttctcaacagactgaagcttcagctttagctgcagctgcctctgttcagcctcttgca
acacagtgtttccaactttctaacatgtttaaccctcaaacagaagaagaagttggatgg
gatacagagattaaggatgatgtgattgaagaatgtaataaacatggaggagttattcat
atttatgttgacaaaaattctgctcagggcaacgtgtatgtgaagtgcccatcaattgca
gcagccattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatgataaca
gcagcatatgtacctcttccaacttaccacaacctcttccctgattctatgacagcaaca
caactactggttccaagtagacgatga
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