Canis lupus familiaris (dog): 477271
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Entry
477271 CDS
T01007
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL isoform X3
KO
K23195
transcriptional repressor CTCF
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
477271 (CTCFL)
03036 Chromosome and associated proteins [BR:
cfa03036
]
477271 (CTCFL)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
477271 (CTCFL)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
477271 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_REST
zf-C2H2_15
zf-C2H2_7th_ZNF462
zf-AtTam37
DUF7479
Motif
Other DBs
NCBI-GeneID:
477271
NCBI-ProteinID:
XP_013962326
Ensembl:
ENSCAFG00000012058
VGNC:
54644
LinkDB
All DBs
Position
24:complement(41724185..41754347)
Genome browser
AA seq
570 aa
AA seq
DB search
MAGTEISVLPEQFTQIKELELIPEKILLEEEEGGVCRGREHLSPRDGAVEAQRPSRPLQA
KVLEAEQELPVTTEESEKHILTLQTVHFSEDVEQQDISWLTPQHQEGVQVMVQQASGGLQ
SLLWLGEGSQQCMAFSIQEEVYSLQEVEVMKLHLLEGSVAVASEESKLVVNPAESTGLVK
LEKGQEEDQQPAEGRFDAQAGEQLFFVEAKPGDERRDEIVLTISNLNVEEEEEKPASGQG
HVEKANSTKVQKKAKEVKRTFRCDICMYTSSRISSFNRHMKIHTAEKPHMCHLCLKAFRT
VTLLRNHVNTHTGTRPYKCGDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCKYASVEASK
LKRHIRSHTGERPFQCLLCSYASKDTYKLKRHMRTHSGEKPYECHVCHARFTQSGTMKIH
ILQKHSENVPKYQCPHCDTIIARKSDLRVHLSNLHTYKAMEMKCHYCSSVFHERYALIQH
QKTHKNEKRFKCEHCSYACKQERHMTVHIRTHTGEKPFTCLSCNKCFRQKQLLNVHFKKY
HDTNFIPTVYECPKCGKGFSRWGHPGASIL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggggactgagatttctgtccttcctgagcagtttacccaaatcaaagaactggag
ctgataccagaaaaaatcctgttagaggaggaagaaggtggagtgtgcagggggagggag
cacctgagccccagagatggggccgtggaagcccagcgcccctccaggcccctccaggcc
aaggtgctggaggccgagcaggagctgccggtcaccacggaggagagcgagaagcacatt
ctgaccctgcagacggtgcacttctccgaagatgtggagcagcaagacatcagctggctg
accccgcagcaccaggaaggggtgcaggtgatggtgcagcaggccagcggtgggctgcag
tctctgctgtggctgggcgagggctcccagcagtgcatggcctttagcatccaggaggag
gtgtactccctgcaggaggtagaggtgatgaagctgcaccttctggagggcagtgtggcc
gtggccagtgaagagagtaagcttgtggtgaacccggctgaaagcaccggattggtcaag
ctcgagaaaggtcaggaggaggaccagcagccagccgaaggaagattcgatgcacaagca
ggagagcagctcttttttgtggaggcaaagccgggagatgaaagaagagacgaaatcgtt
ctgaccatttcaaacttaaacgtggaagaagaagaagaaaaaccagcatccggtcaagga
catgttgaaaaagccaattctacaaaagtccaaaaaaaggcgaaggaagtaaaacgaacc
ttccgctgtgatatctgcatgtacacctcttctcgaatttcaagttttaatcgtcatatg
aaaattcacacggctgaaaagccccatatgtgccacctttgtctgaaagctttccgcacc
gtcactctactgaggaatcatgtcaatacccacacaggaaccaggccctacaagtgtggt
gactgtgatatggcgtttgtcaccagtggagaacttgtccgacacagacgttataaacac
actcacgagaaaccctttaaatgttccatgtgcaagtatgccagtgtcgaagcgagtaag
ctgaagcgccacatccgctcgcacaccggggagcgtcccttccagtgcctcctgtgcagc
tacgccagcaaggacacctacaagctgaagcgccacatgaggacgcactcaggggagaag
ccctacgaatgccacgtgtgccacgcacgcttcacccagagtggcaccatgaaaatacac
attctacagaagcacagcgagaatgtccccaaataccagtgtccgcactgtgacaccatc
atcgccaggaagagtgacctgcgtgtccacttgagcaacttgcatacttacaaagccatg
gagatgaagtgccactactgttcttctgtcttccatgaacgctatgccctcattcagcac
cagaaaacccataaaaatgagaaaagattcaaatgtgaacactgcagttatgcctgcaag
caggaacgtcatatgaccgtccacatacgtacccacaccggcgagaaaccatttacctgc
ctctcctgcaataaatgtttccgacagaagcaacttctaaacgtgcacttcaagaaatac
catgatacaaatttcatcccgaccgtttacgaatgccccaagtgtggcaaaggcttctcc
cgctggggtcatcctggagcgtcaatactctga
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integrated database retrieval system
