Canis lupus familiaris (dog): 477280
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Entry
477280 CDS
T01007
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X5
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03022
Basal transcription factors
cfa05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
477280 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
477280 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
477280 (TAF4)
03036 Chromosome and associated proteins [BR:
cfa03036
]
477280 (TAF4)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
477280 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
477280 (TAF4)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
477280 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
477280
NCBI-ProteinID:
XP_038313691
VGNC:
54737
LinkDB
All DBs
Position
24:complement(45314190..45381365)
Genome browser
AA seq
1088 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRAPEARTAAAGALGN
HVGAGAAVPAEGAPAAAPEPPPAGRARRGLSAGGRRPGPRPHRAAPLVPAGPAAKLSALE
AGAGAGAGAGAGAGACAPGAAPAAQPAAQPAARNGPPGGPGAAQTLNGSAALGTSLRAAA
AAPAVSLLHNGPAPAPPPKPNAAAAAATVIQTPPFLGAPAAPAPRAPSPPAPPAPPAAAP
AAPASAAAAAAAAAPPPPPPPAAASLARPPGPPAAAPAPAPAPAPAPAPAAAQNGGSAAP
APAPAPAPAPPPAANSQPGPAAAAAAAAPAQVAKADSPKTAVQPAPAPPQALATSCPAGA
GAGMILGPTMQGALPAAAGLPPPPPPPPAPGTPGTPGTPGGLPKGSAGAAPQSLPRTPSA
TSGGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQA
QAHVQTQPQTTMAPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQP
NTALQRSPGVQPQLVLGGAAQTTSLGTATAVQTGTPQRTVPGATTTSTAATETMENVKKC
KNFLSTLIKLASSGKQSTETAANVKELVQSLLDGKIEAEDFTSRLYRELNSSPQPYLVPF
LKRSLPALRQLTPDSAAFIQQSQQQPPPASQATTALTAVVLSSSAQRTAGKTAATVTGAL
QPPVISLTQPTQVGVGKQGQPTPLVIQQPPKPGALIRPPQVTLTQTPMVALRQPHSRIVL
TAPQQIQLNQLQPVPVVKPAVLPGTKALSAVSAQAAAAQKNKLKEPGGGSFRDDDDINDV
ASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPAPLQRRILEIGKKHGITELHPD
VVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQR
KDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKK
RKVDSPGPGSGTEGSGPGSAVPGSSGVGTPRQFTRQRITRVNLRDLIFCLENERETSHSL
LLYKAFLK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctggcgccccgcgcgcccgaggcgcggaccgcggccgccggcgcgctcgggaac
catgtcggagccggagcggccgtgccggccgagggcgcgcccgcagcggcgccggagccg
ccccccgcaggtagagcgcggcgcggcctgagcgcgggcgggcgccggccgggcccgcgt
cctcaccgcgccgccccgcttgtccccgcagggcccgccgccaagctgagcgcgctcgag
gccggcgcgggggccggggccggggccggggccggggccggggcctgcgcgcccggggcc
gcgcccgccgcccagcccgccgcccagcccgccgcccgcaacggcccgcccggcggcccc
ggagccgcgcaaactttgaatgggagcgccgcgctggggacctcgctccgcgccgccgcc
gccgcacctgctgtcagcctgctccacaacgggcccgcgcccgcgccgccgcccaagccc
aacgccgccgccgccgccgccactgtcatccagacgccgcccttcctcggcgcccccgcc
gcgcccgcgccccgcgccccctcgccgcccgcgccccccgcgccccccgccgcggccccc
gcggcccccgccagcgccgccgccgccgccgccgccgccgccccgccgccgccgccgccg
cccgccgccgccagcctggcccggccgcccggccccccggccgcagccccggccccggcc
ccggccccggccccggccccggccccggcggccgcgcagaacgggggcagcgccgcgccc
gccccggcccccgcgcccgcgcccgccccgccgcccgccgccaacagtcagcccgggccc
gccgccgccgccgccgccgccgcgcccgcgcaggtggccaaggccgactcgcccaagacg
gcggtgcagccggcgcccgcgccgccgcaggccctggcgaccagctgcccggccggcgcg
ggggccggcatgatcctcgggccaactatgcaaggggcgctgcccgccgccgccggactg
ccgccgccgccgccgccgccgccggcccccggcacccccggcacccccggcacccccggc
gggctgcccaagggctcggccggcgcggcgccccagagcctgcccaggacgccctcggcc
accagcggcgggatccgggccacgctgacgcccacggtcctcgccccccgcctgccgcag
ccgccccagaacccgaccaacatccagaacttccagctgcccccaggtatggtcctcgtg
cggagcgagaacgggcagttgttaatgattcctcagcaggccttggcccagatgcaggcc
caggcccacgtgcagacccagcctcagaccaccatggcgccccgccctgcaacccccaca
agtgcccctcccgtccagatctctaccgtacaggcacctgggacccctattattgcacgg
caggtgaccccaacgaccataatcaagcaagtgtctcaggcccagacgacggtacagccc
aacacggcgctgcagcgctcacccggagtgcagcctcagctggttctgggtggcgctgcc
cagacaacttccctcgggacggcgacagctgttcagacggggacacctcagcgaacggtc
ccaggggccaccaccacctccacagctgccacggaaacaatggaaaacgtgaagaaatgt
aaaaattttctgtctacgttaataaagctggcttcatccggtaaacagtccacagagaca
gctgctaacgtgaaagaacttgtacagagcctactggatggaaaaattgaagcagaagat
ttcactagtagattataccgggaacttaattcttcacctcaaccttaccttgtgcctttc
ctgaagaggagcttgcccgccttgagacagctgacccccgactccgcggccttcatccag
cagagccagcagcagccgccgcccgcctcgcaggccaccaccgcgctcacggccgtggtg
ctgagcagctcagcccagcgcacggccgggaagacggcagccaccgtgaccggcgctctg
cagccccctgtcatcagcctcacgcagcccacacaggttggcgttggcaagcaggggcag
cccacgccactggtgatccagcagccgcctaagcccggagcgctgatccgcccgccacag
gtgacgctgacgcagacgcccatggtcgcgctccggcagcctcacagccgcatcgtgctc
accgcaccccagcagatccagctgaaccagctgcagccagtccccgtggtgaagcccgcc
gtgctacctggaaccaaagctctctctgctgtctcggctcaagcagctgctgcgcagaaa
aacaaactcaaggagcctgggggaggctcgtttcgggatgatgatgacatcaatgatgtg
gcctcgatggcgggagtgaacctgtcagaagaaagtgcacgaatattagccacgaactct
gaattagtgggcaccctgacacggtcctgtaaggatgaaaccttcctcttaccagcgcct
ttacaaagaagaatcttagaaataggtaaaaaacacggcatcacggagttgcatccagac
gtagtgagttacgtatcccacgctacgcagcagaggctacagaaccttgtagaaaagata
tcagaaactgctcagcagaagaacttctcttataaggatgatgatagatatgagcaggca
agtgacgtccgggctcagcttaaattttttgagcagctcgatcaaattgaaaagcagagg
aaggatgagcaggagagagaaatccttatgcgagcagccaagtctcgatccagacaagaa
gatccagaacaattaaggttgaaacagaaggcaaaagagatgcagcaacaagagctggca
cagatgaggcagcgcgatgccaacctcacagcactcgccgccatcgggcccaggaaaaag
aggaaagtggattctccaggaccggggtcggggacagaagggtcgggcccaggctcggcg
gtcccaggcagctccggcgttggaacccccagacagttcacgcgacaaaggatcacgcgg
gtcaacctcagggacctcatattttgtttagagaatgagcgtgagacaagccattcactg
ttgctctacaaagcattccttaagtag
DBGET
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