Canis lupus familiaris (dog): 477292
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Entry
477292 CDS
T01007
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X3
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
477292 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
477292 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfa04147
]
477292 (VPS36)
Membrane trafficking [BR:
cfa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
477292 (VPS36)
Exosome [BR:
cfa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
477292 (VPS36)
Exosomal proteins of colorectal cancer cells
477292 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
GRAM
BBL5
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
477292
NCBI-ProteinID:
XP_005635447
Ensembl:
ENSCAFG00000005932
VGNC:
48286
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All DBs
Position
25:270159..314363
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AA seq
377 aa
AA seq
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MDRFVWTSGLLEINETLVIQQRGIKFDAGTLLLSTHRLIWRDQKNHECCMAILLSQIVFI
EEQAAGIGKSAKIVVHLHPPPSNKEPGPFQSSKNSYIKLSFKEHGQIEFYRRLSEEMTQR
RWENMPVSQSLQTNRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFEDLSKLMVKAK
EMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQYHMQLAKQL
AGILQGPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALKLPLRLRVFDSG
VMVIELQSHKEEEMVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLAEKMGHLCRD
DSVEGLRFYPNLFMTQS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtttcgtgtggaccagcggcctcctggagattaacgagaccctggtgatccag
cagcgcgggataaaatttgatgctggcaccctccttctcagtacacaccgactaatttgg
agagatcagaaaaaccatgagtgctgcatggccattcttctttcccaaattgtgttcatt
gaagaacaggcagctggaattggaaaaagtgccaaaatagtggttcatcttcacccacct
ccatccaacaaagaacctggtccgttccagagtagtaagaactcctacatcaaactatcc
ttcaaagaacatggccagattgagttttacaggcgtttatctgaggaaatgacacagaga
agatgggagaatatgccagtttcccagtcattgcaaacaaatagaggaccccagccagga
agaataagagctgtaggaattgtaggcatcgaaaggaaattggaagaaaaaaggaaagaa
actgacaaaaacatttctgaggcttttgaagacctcagcaagctaatggtcaaggctaag
gaaatggtggagttatcaaaatcaattgctaataaaattaaagacaagcaaggtgacatc
acagaagatgagaccatcaggtttaaatcctatttgctgagcatgggaatagctaaccca
gttactagggaaacctatggctccggcacacagtaccacatgcagctggccaaacagctg
gctggaatactgcaggggccactagaggaacgagggggaataatgtcactcacggaggtg
tactgtttagtaaaccgagctcgaggaatggaattgctctcaccagaagatttggtgaat
gcatgcaagatgctggaagcgctaaaattacctctcaggctccgagtttttgacagtggt
gtcatggtaattgagcttcagagccacaaagaagaggaaatggtggcctcagccttggag
acagtttcagaaaagggatccctgacatcagaagagtttgctaagctggtgggaatgtct
gtcctcctagctaaggaaaggttgcttcttgcagagaagatgggccacctttgccgagat
gattctgtggaaggcttgcggttttacccaaatttatttatgacccagagctaa
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