Canis lupus familiaris (dog): 477412
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Entry
477412 CDS
T01007
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04136
Autophagy - other
cfa04140
Autophagy - animal
cfa04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
477412 (ATG16L1)
04136 Autophagy - other
477412 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
477412 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
477412 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
cfa03029
]
477412 (ATG16L1)
Membrane trafficking [BR:
cfa04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
477412 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
477412 (ATG16L1)
Mitochondrial biogenesis [BR:
cfa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
477412 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
NBCH_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
ZapB
CCDC93_CC
Beta-prop_NWD2_C
KASH_CCD
Fez1
TolB_like
Vma22_CCDC115
Phage_GPO
V_ATPase_I
Leu_zip
Motif
Other DBs
NCBI-GeneID:
477412
NCBI-ProteinID:
XP_005635923
Ensembl:
ENSCAFG00000011752
VGNC:
38219
UniProt:
A0A8C0P7K5
A0A8I3S4Z7
LinkDB
All DBs
Position
25:45256465..45295672
Genome browser
AA seq
623 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDIPNRHEISPGHDGAWNDGQLQEMAQLRIRHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRSKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHAEETSPVRAISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSDAAR
RRSVSSFPVPQDNVDTHPGSSKEVRVPTTAMCIFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVA
WSPSGSHVVSVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgccgacttcccccgctggaagcgccacatttcggaggag
ctgaggcggcgggaccggctgcagaggcaggcgttcgaagagatcatcctgcagtataac
aagttgctagaaaagtcagatcttcattcagtgctggcccataagctccaagctgaaaag
catgacatccccaacaggcatgagataagtcctggacacgatggcgcatggaacgacggt
cagctacaggaaatggcccagctgaggatcagacaccaggaagaactgactgaactacac
aagaagcgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcagaaa
gacagggagatgcagatgaatgaagcaaaaattgcagaatgcttgcagacgatctctgac
ctggagacggagtgccaagaactacgcagtaagcttcaagacctcgaaagggccaaccag
accctgaaggacgaatatgatgctctgcagatcacgtttactgctttggaggagaaattg
aggaaaactactgaagagaatcaggagctggtcacccggtggatggctgagaaagcccag
gaagccaatcgcttaaatgcagagaatgaaaaggattcaaggagacggcaagcccggctg
cagaaagagcttgcagaagcagcaaaggaacctctacccgttgaacaggatgatgacatt
gaagtcattgtggacgaaacctctgatcacgctgaggagacgtctcctgtgcgagccatc
agcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttttgggacatcactcttctgatgctgccagg
aggcgctctgtctcttcctttccagttccccaggataatgtggatactcatcctggttct
agtaaagaagtgagagtgcctacaacagcgatgtgtatctttgatgctcatgatggggaa
gtcaacgctgtgcagttcagccccggctcccggctgctggccacaggaggcatggatcgg
agagttaagctttgggaagtgtttggagataaatgtgagttcaagggttccctgtctggc
agtaatgcgggaattacgagcatcgaatttgacagtgctggatcttacctcttagcagct
tcaaatgattttgcaagtcgaatctggactgtggatgattatcggttacggcacacgctc
acaggacacagcggcaaagtgctgtctgccaaattcctgctggacaatgcccgtattgtt
tctggaagtcatgaccggaccctcaagctctgggatctacgcagcaaagtctgcataaag
acggtgtttgcaggatccagctgcaacgatatcgtctgcacagagcagtgtgtcatgagt
ggccattttgacaagaaaattcgtttctgggacatccgatcggagagcatcgtccgggag
atggagctgctggggaagattacggccctggacttaaacccggaaagaacagaactcctc
agctgctcccgtgatgacttgctaaagatcatcgatctgcgaataaatgctgtcagacag
acgtttagcgcacctgggttcaagtgcggctccgattggaccagagttgtgtttagccct
gatggtggttatgtggcagcgggctcggctgagggctctctctacatctggagcgtgctc
tcagggaaagtggagaaagtcctttccaagcagcatggctcgtccatcaatgctgtggcg
tggtccccctccggctcgcacgttgtcagtgtggacaaaggaagcaaagctgtgctctgg
tcggaatattga
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