Canis lupus familiaris (dog): 477534
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Entry
477534 CDS
T01007
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
477534 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
477534 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
477534 (THOC5)
03041 Spliceosome [BR:
cfa03041
]
477534 (THOC5)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
477534 (THOC5)
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
477534 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
477534
NCBI-ProteinID:
XP_013963365
Ensembl:
ENSCAFG00000012262
VGNC:
47351
LinkDB
All DBs
Position
26
Genome browser
AA seq
694 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDH
GKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSA
SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHED
YMELHFTKDIVEAGLAEDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGE
KTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGP
KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcgagcaaaaaacggaagcccaaagtgatccgaagtgatggagctcca
gctgaggggaagcgtaaccgatctgacacagagcaggagggtaaatactacagtgaggag
gctgaagtggacctgcgggaccctggcagagactatgagctgtacaagtacacgtgccag
gagttgcagaggctcatggctgagatccaggacctaaagagcagaggaggcaaggatgtg
gcagttgagattgaagatcggaggatccagagctgtgtgcacttcatgactctaaagaag
cttaatcgattagcccacatcaggttgaagaaaggaagagatcagacacatgaggccaag
cagaaagtagacgcctatcacctgcagctccagaacctgctgtatgaggtgatgcacctg
cagaaagagatcaccaaatgtctggagtttaagtcaaagcatgaagaaattgatctggtc
agtttagaggagttttataaggaggctcctccagatattagcaaggctgaagtcacgatg
ggagaccctcaccagcaaacccttgcacgtctggactgggagctggaacagcggaaaaga
ctggcggagaagtaccgagagtgcctgtccaacaaggagaagatcctcaaggagattgaa
gtgaagaaggaatacctgagcagtctccagcctcgcctcaatagcataatgcaggcttcc
ctcccagtgcaagagtacctgttcatgccgttcgaccaggctcacaagcagtatgagaca
gctagacacctgccacctcccctctatgtcctctttgtccaagccactgcatatgggcag
gcctgtgctcatatgaaatcctcccagccccctagacaggataagacgttgtctgtggca
attgaaggcagtgtggatgaagccaaggctttatttaagcctcctgaagactcccaagat
gatgagagcgactcggatgctgaggaggagcagactacgaaacgccggcgacccacactg
ggagttcagttggatgacaaacgcaaggagatgctgaagaggcacccgctatcagtcatg
ctggacctgaaatgcaaagatgacagtgtacttcacttgactttctactacctcatgaac
ctcaacatcatgacagtaaaagccaaagtgacgaccgccacggagctgatcacccccatc
agtgcaggtgacttgctatctcctgactcagtcctgagctgtttgtatccgggggatcac
ggaaaaaaaactccaaatccagccaatcagtatcagtttgataaagttggcatcctgact
ttgagagactatgtacttgacctaggtcacccctatttgtgggtacagaagttgggtggc
ctccacttccccaaagagcagccccagcacacagtgattgctgaccactcgctgagtgcc
agccacatggagacaaccatgaaactgctgaagaccagggtacagtcccgcctggccctc
cacaaacagtttgcatccctggaacatggcattgtaccagttaccagtgattgccagtac
ctattccctgcaaaggtggtctcccgcctggtgaagtgggtgacaattgcccatgaggat
tacatggagctgcatttcaccaaggacattgtagaggcgggactggctgaggacactaat
ctctactacatggcacttgtggaaagaggcacagccaaactccaggctgctgtggtgctg
aaccctggctactcctccatcccacccattttccagctctgtctgaattggaaaggggag
aaaaccaatagcaatgatgacaacattcgggccatggagagtgaggtcaacgtgtgctat
aaggagctgtgcggaccccggcccagccatcagctcttgaccaaccagctgcagcgcctg
tgtgtgctgctggatgtctacctggagactgagagccacgatgacagtgtggaggggccc
aaggaatttccccaggagaagatgtgtctgcggcttttcaggggtcccagcaggatgaag
ccatttaaatataaccatcctcaaggattcttcagccatcgctga
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