Canis lupus familiaris (dog): 477734
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Entry
477734 CDS
T01007
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X2
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
477734 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
477734 (DCP1B)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
477734 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
477734 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
477734
NCBI-ProteinID:
XP_013963777
Ensembl:
ENSCAFG00000015993
VGNC:
39809
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All DBs
Position
27:2643527..2697414
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AA seq
595 aa
AA seq
DB search
MAAVAAGGLVGKGRDISLAALQRHDPYINRIVDVASQVALYTFGHRANEWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIYGIWFYDKEEC
QRIAELMKNLTQYEQLKAHQGTGAGNSPMILNSGEGKEVDILRMLTKAKDEYTKCKTCSE
PKQITSSSAIYDNPNLIKPIPVKPSENQQQRVPRPNQTLDSECQHLSLTALFGKQDKSPC
QEAVGSPQTIHQQQQQPLPMRQGVVRSLSYEEPRRHSPPSEKQLCPAIQKLMVRSADLHP
LSELPENRPCRNGSTHSAGEVFLGPVQPGSPHSVGTSQHVQSTSRTQSLLEKLQSAPRPA
NKYDPSTPAPASSAAPSLSTTVPTAAPGAPVKGLAAQAQVGYFNGSLTPQTLGHQTYGKE
QPTHPRPTLPLSGNQTSSSGVISPQELLKKLQIVQQEQQLHASNRPALAAKFPVVTQSSR
TGKALESWMDKTPSTEKQTPLFQATSPPHVPATLAPSLLMSPMVFTQPTCAPLKERDAGL
LPLGSQEPAATSSSLLLPLPTQEPPVITSSPLTRLQLQEALLYLIQVSWFCFPER
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggcggctggcggcctggtggggaaggggcgcgacatcagcctggcggcc
ctgcagcgccacgacccctacatcaaccgcatcgtggacgtggccagccaggtggctctg
tacaccttcggccatcgggccaacgagtgggaaaagactgatgtagaaggaaccttattt
gtttacacaaggtctgcttctccaaagcatggattcaccattatgaataggttgagcatg
gaaaacaggacagaacccattactaaagacctggatttccagctccaagaccctttcctt
ctctacagaaatgccagattgtccatttatgggatttggttttatgataaggaagaatgc
caaagaattgcagagcttatgaaaaacctaactcaatatgaacagttgaaagcccatcag
ggaactggagcaggaaactccccaatgatcctcaattcaggagagggcaaggaagtagat
atcttacgaatgctcaccaaggccaaagatgaatacaccaagtgtaaaacctgttctgag
ccaaaacagataaccagttcatctgccatctatgacaaccccaatctcatcaaaccaatt
ccagtgaagcccagcgaaaaccagcaacagcgggtacctcggcccaaccagactttagac
tccgaatgccaacacttgtccttgacggctctctttggaaaacaggacaaatctccatgt
caggaagctgtgggctccccacagacaatccaccagcagcagcagcagccacttccgatg
aggcagggggttgtacgctccctctcctatgaggaacccagaagacactcaccccccagt
gagaagcagctctgtccagccattcagaaactcatggtcaggagtgcagacctccaccca
ctgtcagagctgcctgaaaaccggccctgcagaaatggcagtacccattctgctggggag
gttttcctgggacctgtccagccagggtctccccatagcgttgggacttctcaacatgtc
caaagtacttccagaactcagagcctgttggagaagcttcagagtgcccccaggccagcg
aataagtatgaccctagcacaccagcacctgccagctcagctgccccaagcctcagcacc
actgtccccactgctgcacctggcgctccagtaaaggggctggcggctcaggcacaagtg
gggtatttcaatggctcccttacacctcagacactcggacatcagacttatggaaaagag
cagcccacacatccaagaccaacgctccccctgtccggtaatcagactagcagttctgga
gtgatctcccctcaagagttactgaaaaagcttcagattgtacagcaggagcagcagctg
cacgcgtctaaccgaccagccttggccgcaaagtttcctgtggtaactcagagctctaga
acagggaaagccctggagtcctggatggacaagacacccagcacagagaagcagactcct
ctttttcaggccacttcgcccccgcatgttcctgctacactggctccttctctgcttatg
tcccccatggtgttcacacaacccacctgtgccccgctgaaagagagggatgctggcctc
ttgcccctgggaagccaagaaccagctgccacttccagcagcctcctcctgcctctgcca
acccaggagccccccgtgatcaccagcagcccacttaccaggctacaacttcaggaagca
ctgctatacctcatccaggtctcttggttttgttttccagaacgatga
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