KEGG   Canis lupus familiaris (dog): 477787
Entry
477787            CDS       T01007                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X2
  KO
K07573  exosome complex component CSL4
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    477787 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    477787 (EXOSC1)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     477787 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     477787 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1
Other DBs
NCBI-GeneID: 477787
NCBI-ProteinID: XP_022267620
Ensembl: ENSCAFG00000009068
VGNC: 40521
LinkDB
Position
28:complement(10911886..10921678)
AA seq 109 aa
MWGPHHLRTLFEELSARKMSELLKKTRLLVEIYKSFRPGDIVLAKVISLGDAQSNYLLTT
AENELGVVVAHSESGVQMVPISWCEMQCPKTHTKEFRKVARVQPEFLQT
NT seq 330 nt   +upstreamnt  +downstreamnt
atgtggggtccacaccacttaagaactcttttcgaggaactatccgcaaggaagatgtcc
gagctactgaaaaagacaaggttgttggttgagatttataagagtttccgccctggtgac
attgtcttggccaaagtgatctctctgggtgatgcacaatcgaactacctcctgaccact
gctgagaatgaacttggggtggtggtggcccacagtgaatcgggtgtccagatggttccc
attagctggtgtgagatgcagtgccctaagacccacactaaagaattccggaaagtggcc
agagtacagcctgaattcttacagacctaa

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