Canis lupus familiaris (dog): 477876
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Entry
477876 CDS
T01007
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04140
Autophagy - animal
cfa04211
Longevity regulating pathway
cfa05010
Alzheimer disease
cfa05014
Amyotrophic lateral sclerosis
cfa05016
Huntington disease
cfa05017
Spinocerebellar ataxia
cfa05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
477876 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
477876 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
477876 (RB1CC1)
05014 Amyotrophic lateral sclerosis
477876 (RB1CC1)
05016 Huntington disease
477876 (RB1CC1)
05017 Spinocerebellar ataxia
477876 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
477876 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cfa01009
]
477876 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
477876 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
cfa03029
]
477876 (RB1CC1)
Protein phosphatases and associated proteins [BR:
cfa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
477876 (RB1CC1)
Membrane trafficking [BR:
cfa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
477876 (RB1CC1)
Mitochondrial biogenesis [BR:
cfa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
477876 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
477876
NCBI-ProteinID:
XP_013964716
Ensembl:
ENSCAFG00000006819
VGNC:
45390
UniProt:
A0A8C0PFM2
A0A8I3PM06
LinkDB
All DBs
Position
29:complement(4885675..4984178)
Genome browser
AA seq
1593 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTEL
VLSPDMPRATNQSLLTSFHKSVEHIAPDTTDAEIGKEIRESCQNTVQQDETSVDAKDGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASISQTSPQSASSPRIESTTG
IATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
ICGKEDLGDHTSLNVQLERCRVVAQDSNFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTA
LEIRNIIEKVKYSLEITLSEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVC
LEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLED
LKKLHVENDEKMQLLRTELQCLEQSHLKELEDTLQFRHTQEFEKVMTDHRVSLEKLKKEN
QQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEES
RAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELI
SRHEEESDMLKAELNKVTSLHQQAFEIEKNLKEEIVELQSKLDAELSALEKQKDEKLTQQ
EEKYEAIIQKLEKDREKFVMSKEQDREQLIQKLNCEKEEAIQTALKEFKLEKEAVEKELL
EKVKHLEDQIAKSLAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETS
MMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDF
QVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVME
KEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggttaacactggaactaccctgacatttgacactgaactt
acagtgcaaactgtggcagacctcaagcatgccattcatagcaaatacaagattgcaatt
cagcatcaggtgctggtggtaaatggaggagaatgcatggctgcagatcgaagagtgtgc
acctacagtgctgggacggacacaaatccaatttttctttttaacaaagaaatgatctta
tgtgatcgtccacctgctattccgaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcacacagttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactttgctctttctgtgaaggtctggtc
catgatgaacatcttcaacaccaaggctgggctgcaatcatggccaatctggaggactgt
tcaaattcataccaaaaactacttttcaagtttgaaagtatttattcaaattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttacctgaacatgaaggctcagaaaaggctgaaatgaaaacctccactgaactg
gtgctttctcctgatatgcctagagcaactaaccaatccttgttaacctcatttcacaag
tcagtggaacatatagccccagataccacagatgctgaaattggaaaagaaattagggaa
tcttgtcaaaatactgtccagcaggatgaaacttcagtagatgctaaagacggtgatctg
cctttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtg
gaatcgttggtcaggaaatgctttgattccatgagcagacttgatccaaggattattcga
ccatttatagcagagtgccgtcaaactattgccaaacttgataatcagaatatgaaagcc
attaaaggacttgaagaccggctctatgccctggaccagatgattgctagctgcagccga
ctagtgaatgaacagaaggaacttgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtattacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaatcatagaaaactgttggatattaaacagaagtgtaccactgccaaa
caagaactagctaataacctacatgtcagactgaagtggtgttgctttgtaatgcttcat
gctgatcaagatggagagaaattacaagctttgctccgccttgtgatagaactgttagaa
agagtcaaaattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgtt
gaggttgtaaggagaaagatgttcataaaacactacagggagtgggctggtgctttagtc
aaagatggaaagcgattatatgaagctgaaaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcctttttaagaaatcgtctgtttaggggattggactcctggcccccatcc
ttttgtactcagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttcagaagttcagccattcctcagggttccctta
ctttgtgactttgaacctcttcaccagcatgtactcgctctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctactgagtgaacaaaaggca
tccataagtcagacatccccacagtcggcttcctcaccaaggatagaaagtacaacagga
atcgcaactactacctcaccgagaactcctcctccacttactgttcaggatcccttatgt
cctgcagtgtgtcccttagaagaattatctccagatagcattgatgcacatacatttgat
tttgaaactatcccccatccaaacatagaacagactattcaccaagtttcattagacttg
gattcattagcagaaagtcctgaatcagattttatgtctgctgtaaatgagtttgtaata
gaagaaaatttatcatctcctaatcctataagtgatccacagagtccagaaatgatggtg
gaatcactttattcatcagttatcaatgcaatagacagtagacggatgcaggatacaaat
atatgtggtaaagaggatttaggagatcatacttctctaaatgtccaattggaaagatgt
cgagttgttgcccaagactcgaatttcagtatacaaaccatcaaggaagacctctgccac
ttcagaacatttgtacaaaaagaacagtgtgacttctcaaattctttaaaatgtacagca
ttagaaataagaaacattattgagaaagtaaaatattctctggaaataacactaagtgaa
aaacatcaaaaagaactgcagtctttaaaaagtgaatatgaaggcaagcttgatgcacta
ataaaggagagtgaagaaaatgaaaacaaaattaaaaagctgaaaggagatttggtatgc
cttgaggaggttttacaaaataaagataatgaatttgctttggttaaacatgaaaaagaa
gctgtcatctgcttgcaaaatgaaaaggatcagaagttgttagaaatggaaaatataatg
cacactcaaaattgtgaaattaatgaactgaaacagtcacgagagatagtattagaagac
ttaaagaagctccatgttgaaaatgatgagaagatgcagttgttgcggacagaacttcag
tgcttagagcaaagtcatctaaaggagttagaggacactctgcagtttaggcacacacag
gagtttgagaaagttatgacagaccacagagtgtctttggagaaattaaaaaaggaaaat
caacaaagaattgaccagatacaagagtctcatgccacagttatccaggagaaagaacaa
cagctacaggaattaaaactcaaagtttctgatttgtcagacatgagatgtaagttagag
gttgaacttgcattgaaggaagcagaaactgatgaaatcaaaattttgctagaagaaagc
agagcccagcagaaggagaccctaaaatctctccttgaacaagagacagaaaatttgaga
acagagataagtaaactaaaccaaaagattcaggataataatgaaaactatcaggtgggt
ttggcagagctaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaatt
agtagacatgaagaagaatctgatatgcttaaagctgaattaaacaaagtaacatcattg
catcagcaagcatttgaaatagaaaaaaacctgaaagaagaaatagttgaactgcagagt
aaattggatgcagaattgagtgctcttgaaaaacaaaaagatgaaaaactcacccaacag
gaagagaagtatgaagctattatccagaaacttgagaaggacagagagaagtttgtcatg
agcaaggagcaagacagagaacagttaattcagaagcttaattgtgaaaaagaagaagct
attcagactgccttaaaagagtttaaattggagaaagaagctgttgagaaagagttatta
gagaaagttaaacatcttgaggatcaaatagcaaaaagtcttgccattgaatctaccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagcttcaggaagaaaaagcaaag
tttttagaacaacttgaagagcaagagaaaagaaagaatgaagaaatgcaaaatgttcga
acatctctgattgctgaacaacagaccaattttaacactgttttaacaagagagaaaatg
agaaaagaaaatataatcaatgatcttagcgataagctgaaaagtacaatgcaacagcaa
gagcgagataaagatttgatagagtcactctctgaagatcgagctcgtttgcttgaggaa
aagaaaaaacttgaagaagaagtcagtaagttgcgtagtagcagttttgttccttcagca
tacgtagctgcagccccagaactttatggagcttgtgcacctgaactcccaggtgaaaca
gagagatcagcaatggaaacacaagatgaaggaaaagtggattcagcaatggagacaagt
atgatgtctgtacaagaaaatatccatatgctatctgaagaaaaacagagaataatgctg
ttagaacgaacattacagttgaaagaagaagaaaacaagcgattaaatcaaagactgatg
tctcagagcatgtcttccgtatcctcaaggcattctgaaaaaatagctattagagatttt
caggtgggagatttggtactcatcatcctagacgagcgccatgacaattatgtattattt
actgttagtccaaccttgtattttctgcattcggagtctctgcctgccctggatctcaaa
ccaggtgagggtgcttcaggtgcatcaagaagaccgtgggtacttggaaaagtaatggaa
aaggaatactgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggacaaag
ttttacagagtgaaagctgtgtcatggaataagaaagtataa
DBGET
integrated database retrieval system
