Canis lupus familiaris (dog): 478422
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Entry
478422 CDS
T01007
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
478422 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
478422 (U2AF1)
Spliceosome [BR:
cfa03041
]
Complex A
U2 snRNP components
U2 related factors
478422 (U2AF1)
Complex B
478422 (U2AF1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
478422
NCBI-ProteinID:
XP_003640134
Ensembl:
ENSCAFG00000010572
UniProt:
A0A8C0NWX8
A0A8I3S2M7
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Position
31:complement(36412908..36426355)
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AA seq
240 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacttggcctccatttttggcaccgagaaagacaaagtcaactgttcattt
tatttcaaaattggagcatgtcgtcatggagacagatgctctcggttgcacaataaaccg
acctttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgccgtgagtgacgtcgagatgcaggagcactatgatgag
ttctttgaggaggtttttacagaaatggaggagaagtatggggaagtcgaggagatgaat
gtctgtgataatctcggagaccacctagttgggaacgtgtacgtcaagtttcgccgagag
gaagacgcggaaaaggccgtgattgacttgaacaaccgctggtttaatgggcagccaatc
cacgctgagctctccccggtgactgacttccgagaggcgtgctgccgccagtacgagatg
ggggagtgcacgcggggcggtttctgcaacttcatgcacctgaagcccatttccagggag
ctgcggcgggagctgtacgggcgccggcgcaagaagcatagatcgaggtcccggtctcgg
gagcgtcgctctcggtctagagaccgtggtcgtggcggcggcggtggtggcggcggcggc
ggtgggggacgggagcgtgacaggaggcggtcgagagaccgtgaaagatctgggcgattc
tga
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