Canis lupus familiaris (dog): 478482
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Entry
478482 CDS
T01007
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
478482 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cfa04990
]
478482 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
cfa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
478482 (PDLIM5)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
478482
NCBI-ProteinID:
XP_005639258
Ensembl:
ENSCAFG00000010071
VGNC:
44387
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Position
32:complement(24444240..24655897)
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AA seq
627 aa
AA seq
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MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQANVRIGDVVLSIDGISAHG
MTHLEAQNKIKGCTGSLNMTLQRASATPKPEPVPVQKPAVTSVCSETAQELAEGQRRGSQ
GDSKQQNGNPGTVKTPPKRPPRKHIVERNTEFYHIPTHSDASKKRLMEDTEDWRPRTGTT
QSRSFRILAQITGTEHLKESDTENTKKAKFDSSLEDLPKSGPHPPATSQVLHFGSQVATL
SKVTTCSSSSTRNVVTSSLEGFRNFSTFCSARYSAAVLSSAAATVSAVLAAKTRLSSPDK
YHLLLDALCISPVSKPLAFSYLQSSRKSTGSIHVKKISHTQETSQQLAPSVASARSMPER
RENPATTRPGVAGLTTAAAFKPPGSPNVIKSPSWQQPNQAVLSPGRISNSAASSGAVTPA
NSAGGQPQPGDQDTLVQRAEHIPAGKRTPMCAHCNQVIRGPFLVALGKSWHPEEFNCSHC
KNTMAYIGFVEEKGALYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCFVCVACG
KPIRNNVFHLEDGEPYCETDYYALFGTICHGCEFPIEAGDMFLEALGYTWHDTCFVCSVC
CESLEGQTFFSKKDKPLCKKHAHSVNF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacagtgtgtccttggttggcccagctccttggggtttccggctgcaaggt
ggcaaggatttcaacatgcctctgacaatctctagtctgaaagatggcggcaaagcatcc
caggcaaatgtaagaataggcgatgtggttctcagcattgatggaataagcgcacatgga
atgactcatcttgaagcccagaacaagattaagggttgtacaggctctttgaatatgact
ctgcaaagggcatctgccacacccaagcctgagccagttcccgttcaaaagcccgcagtc
accagcgtgtgttccgagactgctcaggagctagcagaggggcagagaagaggatcccag
ggtgacagtaaacagcaaaatggtaaccctggcaccgtgaaaaccccacccaaacgccca
ccgagaaaacacattgtggagcgcaatacagagttttatcacataccaactcatagtgat
gccagcaagaagagactgatggaggacactgaagattggcgtccaaggactggaacgact
cagtctcgctctttccggatccttgcccagatcactgggactgaacatctgaaagaatcg
gacactgaaaatactaagaaggcaaagtttgacagttctctggaagacctacctaagagt
ggacctcacccacctgcaacttctcaggttttacattttggtagccaagtagccacactt
tctaaagtaactacgtgttctagcagctccacaagaaatgtggtgacaagttctttggaa
ggttttcgaaacttttctaccttctgttctgctagatatagtgctgcagttcttagcagt
gcagctgctactgtgtctgctgttcttgctgcgaaaaccaggctctccagtcctgataaa
tatcacttactcctggatgcactttgcatcagtcctgtttccaagcctttagctttttcg
tacctccagtcctcgaggaagtcaactggctctatccatgttaaaaaaataagccacacc
caggagacttctcagcagttggcaccatcagtagcttcagcacggagcatgcctgagagg
cgggagaacccagccaccaccagaccaggggtggctggtctcacaactgctgccgccttc
aagcccccaggatctcccaacgttatcaagtcaccaagctggcaacagccaaaccaagca
gtgctttcccctggaagaatctcaaacagtgcagcttcctcaggagcggtaacaccagcc
aactcagctgggggacagccccagccaggtgaccaggatactttagtgcaaagagctgag
cacattccagcagggaaacgaactccaatgtgtgcccattgtaaccaggtcatcagggga
ccattcctagtggcactggggaaatcttggcatccagaagaatttaactgttctcactgc
aaaaatacaatggcctacattggatttgtagaggaaaagggagccctgtattgtgagctg
tgctatgagaaattctttgctcctgaatgtggtcgatgccaaaggaagatccttggagaa
gtcatcaatgctttgaaacaaacttggcacgtttcctgttttgtgtgtgtggcctgtgga
aaacccattcgtaataatgtttttcatttggaggatggtgaaccatactgtgagactgat
tattatgccctttttggtaccatatgccatggatgtgaatttcccatagaagctggcgac
atgttcctggaagctctgggctatacctggcatgacacttgctttgtatgctcagtatgt
tgtgaaagtttggaaggtcagacatttttctccaagaaggacaagccgctttgcaagaaa
catgctcattctgtgaatttttga
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