Canis lupus familiaris (dog): 478679
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Entry
478679 CDS
T01007
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X2
KO
K06675
structural maintenance of chromosome 4
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
478679 (SMC4)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
478679 (SMC4)
Condensin II
478679 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ATG17_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
478679
NCBI-ProteinID:
XP_038318861
Ensembl:
ENSCAFG00000014295
VGNC:
46545
LinkDB
All DBs
Position
34:30497727..30536870
Genome browser
AA seq
1216 aa
AA seq
DB search
MANEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGY
RAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTAYRD
NTSVYHISGKKTTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLE
YLEDIIGSGRLNEPIKILCRRVEILNEHRGEKLNRVKLVEKEKDALEGEKNIAIEFLTLE
NEIFRKKNHVCQYYIYDLQKRIAEMETQKEKIHEDTKEINEKSSILSNEMKAKNKAVKDV
EKKLNKITKFIEENKQKFTQLDLEDVQVREKLKHASSKAKKLEKQLQKDKEKVEEFKSIP
AKSEKIITEMTTRNSALEKEKEKEEKKLKEVMDSLKQETQGLQREKESREKELMGFSKSV
NEARSKMDVAQSELDIYLSRHNTAVSQLNKAKEALIAASETLKERKAAIRDIEAKLPQSE
LELKEKEKELQELTQEEIKLKGLVRDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRI
PGIYGRLGDLGAIDEKYDVAISSCCHALDYIVVDSIDTAQDCVNFLKRQNIGVATFIGLD
KMAVWANKMTKIQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADNLDQATRVAYQKD
RRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEVNRMESQLQRDSQKALQ
IQEQKVQLEEAVVKLRHNEREMRNTLEKFTASIQRLSEQEEYLNIQVKELEANVLATAPD
KKKQKLLEENVSVFKTEYDNVAERAGKVEAEVKRLHNTIVEINNHKLKAQQDKLDKINKQ
LDECASAITKAQVAIKTADRNLKKAQDSVFRTEEEIKDTEKEVKDLTAELKSVEDKAAEV
YQNTTAAEESLPEIQKEHRNLLQELKIIQENEHALQKDALSIKLKLEQIDGHIAEHNSKI
KYWQKEIGKISLHPIENNPLEEIAVLSPEDLEAIKNPDSITNQIALLEAQCHEMKPNLGA
IAEYKKKEELYLQRVAELDKITCERDHFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQM
LTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKP
TPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIYKTYNIT
KSVAVNPKQIASKGLC
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgaagctggagctcctcggcttatgataactcatattgtaaaccagaacttc
aaatcctatgctggggaaaaaattttgggaccttttcataagcgcttttcctgtattatt
gggccaaatggcagtggcaaatccaatgttattgattctatgctttttgtgtttggctat
cgagcacaaaaaataagatctaaaaaactttcggtactaatacacaattctgatgaacac
aaggatattcagagttgtactgtagaagttcattttcagaagataattgataaggaaggg
gatgattatgaagtcattcctaacagtaacttctatgtatccagaactgcctacagagat
aatacatctgtctatcacataagtgggaaaaagacaacatttaaggatgttggaaatctt
cttcgaagccatgggattgacctggaccataatagatttttaatcttgcagggtgaagtt
gaacaaatcgctatgatgaaaccaaaaggccagactgaacatgatgagggtatgcttgaa
tatttagaagatataattggttccggacggctaaatgagcctattaaaatcttgtgtcgg
agagttgaaatattaaatgaacacagaggagagaagttaaacagagtaaagctggtggaa
aaggaaaaggatgccttagaaggagagaaaaacatagccattgaatttcttaccttggaa
aatgaaatatttagaaaaaagaatcatgtctgccaatattacatttatgatctacaaaaa
cgaattgctgaaatggaaactcagaaggaaaaaattcacgaagataccaaagaaattaat
gagaagagcagtatattgtcaaatgaaatgaaagctaagaataaagctgtaaaagatgta
gagaaaaaactgaataaaattacaaaatttattgaggaaaacaaacaaaaatttacacag
ctagatttggaagatgttcaagttcgtgaaaaattaaaacatgcttcaagtaaagccaaa
aaactggagaaacaacttcaaaaagataaagaaaaggttgaagaatttaaaagtatacct
gccaagagtgaaaagatcataactgagatgacaactcgaaacagtgcccttgagaaggaa
aaagagaaagaagaaaaaaagttaaaagaagtcatggatagccttaaacaggaaacacaa
gggcttcagagagaaaaagaaagtcgagagaaagaacttatgggttttagcaaatcggtg
aatgaagcacgttcaaagatggatgtagcccaatcagaacttgatatctatctcagtcgt
cataatactgcagtgtctcaattaaataaggccaaggaagctctaattgcagcttctgag
actctcaaagaaaggaaagctgcaatcagagatatagaggcaaaactccctcaatctgag
ctggaattaaaagagaaagaaaaagaacttcaagaacttacacaagaagaaataaaatta
aaaggtttggttcgtgatcttttccaaaaagttgaagaagcaaagagctccttagcaatg
aatcgaagtagagggaaagtccttgatgcaataattcaagaaaaaaaatctggcaggatt
ccaggaatatatggcagattgggggatttaggagcaattgatgaaaaatacgatgttgct
atttcatcctgttgtcatgcattagactacattgttgttgactctattgatacagcccaa
gattgtgtgaacttccttaaaagacaaaatattggagttgcaaccttcataggtttggat
aagatggcagtatgggcgaataaaatgaccaaaattcaaactcctgaaaatactcctcgg
ctatttgatttagtaaaagtaaaagatgaaaaaattcgccaagctttttactttgcttta
cgggatacattagttgctgataacttagatcaagccacaagagtagcatatcaaaaagat
agaagatggagagtggtgacattacaagggcaaatcatagaacagtcaggtacaatgact
ggtggtggaagcaaagtaatgaaaggaaggatgggttcatcagttgttgttgaaatctca
gaagaagaggtaaatagaatggaatcacagttgcagagagactctcaaaaagcactgcaa
atccaggaacagaaagtacaactggaagaagcagtagttaagttaaggcataatgaacga
gaaatgaggaatacgttggaaaagtttactgcaagcatccagcgtttatcagagcaagaa
gaatatttgaacatccaagttaaggaacttgaagctaatgtacttgctacagcccctgac
aaaaaaaagcagaaattactagaagaaaatgttagtgttttcaaaacagaatatgacaat
gtggctgagagagctggtaaagtagaagctgaggttaaaagattacacaataccatcgta
gaaatcaataaccataaactgaaggcccaacaagacaaacttgataaaataaataagcaa
ttagatgaatgtgcttctgctattactaaagcccaagtagcaatcaagactgctgacaga
aatcttaaaaaagctcaagactcagtcttccgcacagaggaagaaataaaagacactgag
aaagaagtaaaggatttaacagcagaactaaaaagtgttgaggacaaagcagcagaggtc
tatcagaatacaactgccgcagaggagtccttaccagagatccagaaagaacatcgtaat
ctacttcaagaattaaaaataattcaagaaaatgaacatgctcttcaaaaagatgcactt
agtattaagttgaaacttgaacaaatagatggtcacattgctgaacataattctaagata
aaatattggcaaaaagagattggaaaaatatccctgcatcccatagaaaataatcctctt
gaagagattgcagtcctaagcccagaggatcttgaagcaatcaaaaatccagattctata
acaaatcaaattgcacttttagaagcccagtgtcatgaaatgaaaccaaaccttggtgcc
attgcagagtataaaaagaaggaagaattatacttacagcgagtagcagaactggacaaa
attacttgtgaaagagatcattttagacaggcatatgaagatcttcggaaacaaaggctt
aatgaattcatggcaggtttttatataataacaaataaactaaaggaaaactaccaaatg
ctaactctgggaggtgatgctgaactggaacttgtagacagcttggatcctttctctgaa
ggaatcatgttcagtgttcgaccacctaagaaaagttggaagaagatcttcaatctttca
ggaggagagaaaacacttagttcattggctttagtatttgctcttcaccactacaaaccc
actcctctgtacttcatggatgagatcgatgcagcccttgattttaaaaatgtgtccatt
gttgcattttatatatatgaacaaacaaaaaatgcccagttcataataatttctcttcga
aataatatgtttgagatttcagacagacttattggaatatacaagacatacaatataaca
aaaagtgttgcagtaaatccaaaacaaattgcatctaaaggactttgttga
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