Canis lupus familiaris (dog): 478729
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Entry
478729 CDS
T01007
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03083
Polycomb repressive complex
cfa04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
478729 (JARID2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
478729 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
478729 (JARID2)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
478729 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
478729 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
478729
NCBI-ProteinID:
XP_005640109
Ensembl:
ENSCAFG00000009885
VGNC:
42181
UniProt:
A0A8C0Z1I0
A0A8I3PIU6
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All DBs
Position
35:14425042..14685518
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AA seq
1259 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLPGSLKTVN
GLLGHGQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQ
DEEDVEEEDDETEDVKTATNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSSREKEPVQK
HKSKEATPGKEKHSDHRADSRREQASAAHPPAAPSTGSSAKGLAANHHHPPLHRSAQDLR
KQVSKVNGVTRMSSLGTSATSAKKMREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKET
KPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGHAVNGLKVSGRLNPKSCTK
EVGGRQLREGLRNSKRRLEEAQQAEKPQSPPKKMKGTAGPAEAPGRKAAAAPPTAPAPVE
KALLNGHVKKDVPERSLERNRPKRATAGKSAPGRQAHGKADSASCENRSTSQSEPLHKPH
EAAAAAAAAAAAAKPEKGGGRAGWAAMDEIPVLRPSAKEFHDPLVYIESVRAQVEKYGMC
RVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPL
IGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLS
YDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTEHDYNKFHPLPRFEPKNGLINGVAHR
NGFRTKLKEVGPAQLKTGRRRLFAQEKEVAREEEEDKGVLSDFHKCIYKGRSVSLTTFYR
TARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSR
HGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADC
IWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQF
VVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQ
AEAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYGSHDSNGAMADGKKKPR
KWLQLETSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEE
QIISLVNQICGKVSGKNGSIENCLSKPTPKRGPRKRATVDVPPSRLSSSSSSKSASSSS
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagaggaatatcattcagaagaaatacgatgacagtgatggg
attccgtggtcagaagaaagggtggtacgtaaagtcctttatttgtctctgaaagaattc
aagaatgcccagaagaggcagcacggggaaggcctgcctgggagcctgaaaaccgtgaat
gggctccttggtcatggccagtctaagggattaggaccagcgtcagaacagtcagaaaat
gagaaggacgatgcctcccaagtgtcctctactagcaacgatgttagttcatcagatttt
gaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagtttgcccagtct
cagcccaacagccccagcacaactccagtgaagatagtggagcctttgctgcctcctcca
gctactcaaatttctgacctctctaaaaggaagcccaagacagaagattttctgactttt
ctctgccttcgaggttctcctgcgctgcccaacagcatggtatatttcggaagctctcag
gacgaggaggacgtcgaggaggaagacgatgagacggaagacgtcaaaacagccaccaac
aatgcttcatcttcatgccagtcaacccccaggaaaggaaaaacccacaagcacgttcac
aacgggcatgttttcaatggttccagcaggtcatcacgggagaaagaacctgttcagaaa
cataaaagcaaagaggccactccggggaaggagaagcacagcgatcaccgggctgacagc
cggagggaacaggcttcagcggcccaccccccagcggccccgtccacgggttcctcggcc
aaggggctcgctgctaaccaccaccacccccctctgcatcggtcggctcaggacttacgg
aaacaggtttcgaaggtaaatggagtcactcgaatgtcatctctgggtacaagtgcaacc
agtgccaaaaagatgcgcgaagtcagaccttcaccgtccaaaactgtgaagtacactgct
acggtgactaaggggactgtcacatacaccaaagccaagagagaactggtcaaggaaacc
aaacccaatcaccacaagcccagttccgctgtcaaccacacaatctcagggaaaactgaa
agtagcaatgcaaaaacccgcaaacaggtgctatccctcgggggggcgtccaagtccacc
gggcacgccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgcactaag
gaggtgggggggcggcagctgagggaggggctgcggaactccaagaggagactggaagag
gcacagcaggcagagaagccgcagtccccacccaagaagatgaaagggacggccggccct
gccgaagcgcccggcaggaaggcggcagcggcccccccgacggcgcccgccccggtggag
aaggccctgctcaacgggcacgtgaagaaggacgtgcccgagcggagcctagaaaggaac
cggccgaagcgggccacggccggcaagagcgcgccgggcagacaagcacacggcaaggcg
gacagcgcctcctgtgaaaatcgttctacctcgcaatcggagcccttgcacaagccccac
gaggcggcggcggcggcggcagcggcggcggcggcggccaagcctgagaaggggggcggc
cgggccggctgggcggccatggacgagatccccgtgctcaggccgtccgccaaggagttc
cacgacccgctcgtctacatcgagtcggtccgcgctcaggtggagaagtacggcatgtgc
agggtgatcccccctccagactggcggcccgagtgcaagctcaacgacgagatgcggttt
gtcacgcagattcagcacatccacaagctgggccggcgctggggccccaacgtgcagcgg
ctggcctgcatcaagaagcacctcagatctcagggcatcaccatggacgagctcccgctc
ataggaggctgcgagctcgacctggcctgctttttccggctgattaacgagatgggcggc
atgcagcaagtgactgacctcaaaaaatggaacaaactagcagacatgctgcgcatcccc
aaaaccgcccaggaccggctggccaagctccaggaagcctactgccagtacctgctctcc
tacgactccctgtctcccgaggagcaccgccggctggagaaggaggtgctgatggagaag
gagatcctggagaagcggaaggggcccctggagggccacacggagcacgactacaacaag
ttccaccccctgccccgcttcgagcccaagaatggcctcatcaacggcgtggcccacagg
aacggcttccgcaccaagctcaaagaggtgggcccggcccagctcaagacgggccggcgg
cgactctttgctcaggaaaaggaagtggcgcgagaggaggaggaggacaaaggcgtcctc
agtgacttccacaagtgcatatacaagggaaggtctgtttctttaacgactttttatcga
acagcaagaaatatcatgaacatgtgctttagcaaggagcctgccccagctgaaatcgag
caagagtactggaggttagtggaagagaaggactgccacgtggccgtgcactgcggcaag
gtcgacacgaatacgcacggcagcgggttccctgtggggaagtcagaaccgttttcaagg
catggatggaacctcaccgtcctccccaataacacaggatccatcctgcgtcacctcggt
gctgtacctggagtgacaattccctggctaaacattggcatggtcttttctacctcatgc
tggtctcgagaccaaaaccaccttccctatattgactacttacacactggtgctgactgc
atttggtattgcattcctgctgaggaggagaacaagctcgaagacgtggtgcacacgctg
ctgcaggccaacggtaccccagggctgcagatgctggagagcaacgtcatgatctccccg
gaggtgctgtgcaaggaggggatcaaggtgcacaggaccgtgcagcagagtggccagttt
gtcgtctgcttcccgggctcctttgtgtccaaagtgtgctgcggctacagcgtctccgag
accgtgcacttcgccaccacccagtggacaagtatgggcttcgagacggccaaggaaatg
aagcgtcgccatatagccaagccattctccatggagaagttactctaccagattgcacaa
gcggaagcgaagaaggagaatggccccactctcagtaccatctccgcccttctggatgag
ctcagggatacggagctgcggcagcggcggcagctgttcgaggccggcctccactcgtcc
gcccgctacggcagccacgacagcaacggcgccatggcggatggcaagaaaaagcctcga
aagtggctgcagttggagacgtcggagaggaggtgtcaggtctgccagcacctgtgctac
ctgtccatggtcgtgcaggagaacgagaacgtggtgttctgtctggagtgcgccctgcgc
cacgtggagaagcagaagtcctgccgaggcctgaagctgatgtaccgctacgacgaggag
cagatcatcagcctggtcaatcagatctgcggcaaagtatctggtaagaacggcagcatc
gagaactgtctcagtaaacctacaccaaaaagagggccccgcaagagagcgaccgtggac
gtgccgccatcccggctttcatcctccagttcatccaaaagtgcttcgagctcgtcgtga
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