Canis lupus familiaris (dog): 478900
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Entry
478900 CDS
T01007
Symbol
ABCA12
Name
(RefSeq) ATP-binding cassette sub-family A member 12 isoform X2
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
478900 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfa02000
]
478900 (ABCA12)
Transporters [BR:
cfa02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
478900 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_30
AAA_22
HAT1_C
Motif
Other DBs
NCBI-GeneID:
478900
NCBI-ProteinID:
XP_038319798
Ensembl:
ENSCAFG00000014278
VGNC:
37423
LinkDB
All DBs
Position
37:complement(22965092..23134494)
Genome browser
AA seq
2534 aa
AA seq
DB search
MASQFHQLRVLVWKNWLGVKRQPLWTLVLILWPVIIFIILAITRTKFPPRAKPTCYLAPR
NLPSTGFFPFLQTLLCDTDSKCKDTPYGPQDLLRRKGIDDALFKGSGIQRKSSNLEKDSN
LSLRSTKVPERRHTSPATVFPSPSSVLKSTGTDTFNSSQVLARILGLEKLLEQNSTSEDI
RRKLCESYPDYITRYAFSWTTLGKNVFNKFCLSNMTFLESSLHELTNQFSQISSDPSNQK
TVFQEMVKVLSFFSQVQEQTAVWQLLSSFPNVFQNDTTLNNLLDVLRNANSALLVVQKVY
PHVTTNEGFKTLHKSVKHLLYTLDSPARGGSDNVTHVWHEEGGQLSPSSLAAQLLILENF
EDALLNISADSPYIPYLACVRNVTDSLARGSQENLRLLQSIISFKKSFLQNGFYEDYFSS
VPEVLKSKLSQLRNVTELLCESETFDSIQRMCQLSDVNFRNLCEESAFHVQLLEAAELGT
EIAANLLYHDDIISKKLRDLLTGDPSKINLNMDWFLEQALQMNYLENITQLMPTIEAMLH
VNNSADTSEKPGRLIEMFKNVEELKEELRRTTGMSPRSIDSLLATPIPDNRAEIISRVFW
LYSCDANMTYSNMEDEMKEFCNLPLTERSRQSYLIGLTLLHYLDIYNFTYKVFFPREDQK
PVEKMIELFMRLKEILNQMASGTHPLLDKMTSLRQMHLPRSVPLSQAMYRSNRMNTPQGS
FSTISQALCSQGITTEYLTAMLPSSQRRKGNHTKDFLTYKLSKEQIASKYGIPTHTTPFC
FSLYKDIINMPAGPVIWAFLKPMLLGKILYAPYTPITKAIMEKSNVTLRQLSELREKSQE
WMDNSPLFMNSFHLLNQTIPMLQNTLRNPFVQVFVKFSVGLDAVELLKQIDELDILRLKL
ENSIDLIDHLNTLSSLTVNISSCVLYDRIQAAENVDEMEREANRLYKSNELFGSVIFKLP
SNRSQHRRYDSENVSLPPVVKYTIRMSLKTAQTTRSIRTKIWAPGPHNSPSHNQIYGRAF
VYLQDSIERAIIELQTGRNSQEVAVQVQAIPYPCYMKDNFLTSVSYSLPIVLMVAWVVFI
AAFVKKLVYEKDLRLHEYMKMMGVNSCSHFFAWLIESVGFLLVTIIILIIILKFGNILPK
TNGFILFLYFSDYSFSVISMSYLISVFFNNTNIAALIGSLIYIIAFFPFIVLITVEDELS
YVIKVFMSLLSPTAFSYASQYIARYEEQGIGLQWENMYSSPVQDDTTSFGWLCCLILADS
FIYFIIAWYVRNVFPGTYGMAAPWYFPVLPSYWKERLGCTDVKHEKSNGLMFTNIMMQNT
NPSASKTSPEYMFPSNIEPEPKDLTVGVALHGVTKIYGSKIAVDHLNLNFYEGHITSLLG
PNGAGKTTTISMLTGLFGASAGTIFVYGKDLKTDLHTVRKNMGVCMQHDVLFSYLTTKEH
LLLYGSIKVPHWTKKQLHEEVKRTLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSR
VVILDEPSTGVDPCSRRSIWDVISKNKTARTIILSTHHLDEAEVLSDRIAFLEQGGLRCC
GSPFYLKEAFGDGYHLTLTKKKSPNLSANTTCDTMAVTAMIRSHLAEAYLKEDIGGELVY
VLPPFSTKVSGAYLSLLRALDNGMGDLNIGCYGISDTTVEEVFLNLTKESQKNSSMSLEH
LTQKKIGNPSTNGISTPDDLSVSSSNFTDRDDKILKRGKGGKKKIGSSLQRSENSHPSTQ
GLVSAMWNFPGIDNMCLNISDPRCLKKGSLEKWNTSGEPVTNFGVCSCSENIQECPKFNY
SPPHRRTYSSQIIYNLTGHRLENYLISTANEFMQKRYGGWSFGLPLTKDLRFDITEVPAN
RTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNMSKYDAARHGIIMYSHPYPGVQDQEQATM
SSLIDILVALSILMGYSVTTASFVTYVVREHQTKAKQLQHISGIGVTCYWVTNFIYDMAF
YLVPVAFSIGVIAIFKLPAFYSGNNLGAVSLLLLLFGYATFSWMYLLAGLFHETGMAFIT
YVCINLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGYGLIELSQ
QQSVLDFLKAYGVEYPSETFEMDKLGAMFVALVSQGTMFFFLRLLINEWLIKKLRLFFRK
FNSSPVMETIDEDEDVRAERLRVENGAGEFDLVQLHRLTKTYQLIHKKIIAVNNISIGIP
AGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKTGSLGHVDSHSSLVGYCPQEDA
LDDLVSVEEHLYFYARIHGIPEKDIKETVHKLLRRLHLMPYKDRATSLCSYGTKRKLSTA
LALIGKPSILLLDEPSSGMDPKSKRHLWKIISEEVQNKCSVILTSHSMEECEALCTRLAI
MVNGRFQCIGSLQHIKSRFGRGFTVKVHLKNTKVSMDTLTRFMQLHFPKTYLKDQHLSML
EYHVPVTAGGVANIFDLLETNKTALNITNFLVSQTTLEEVFINFAKDQKSYETADTSSQG
STISVDSQDDRMES
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccagtttcatcagcttcgggttctggtctggaaaaattggctaggtgtcaaa
aggcagccgctttggacacttgtcttgattttatggccagtcattattttcataattttg
gctattacccggaccaaatttcctccaagagcaaaaccaacttgttaccttgcacctcga
aaccttcctagtactggcttcttcccgttcctgcaaaccctactctgtgacacagactct
aaatgcaaagacacaccgtatgggccacaagatctgcttcgtaggaaaggaattgatgat
gcgctatttaagggcagtggaattcagagaaagtcatccaacctggagaaggacagcaat
ttatcactccggagcaccaaagttccagaaagaaggcacacatcaccagccacagtattt
cccagtccaagttctgttttgaaaagcactggaacagatactttcaatagtagtcaagtc
cttgcccggatccttggtttggaaaagctgttagagcaaaattcaacttcagaagacata
cgaagaaaactgtgtgagagctatccagactatatcactcgttacgccttctcttggacc
actctagggaaaaacgtttttaacaaattttgcctatccaatatgacttttttagagtct
tctctccatgaactaaccaaccaattctctcagatatcaagtgatcccagcaaccagaag
acagtattccaggaaatggtcaaagtgctgtccttcttctcacaagtccaagagcagacc
gctgtgtggcagcttctttctagttttccaaatgtgttccagaatgacacaacactaaac
aatctacttgatgttcttcgaaatgcaaatagtgcgctgctggtcgtgcagaaggtttat
ccacatgtcacaactaacgaaggtttcaaaacactccataaatctgttaaacatctgctg
tacactctggactccccagctcgaggtggctctgataatgtgacgcatgtgtggcatgag
gaaggtgggcagttatccccaagcagcctggctgcacagctcctaatactggaaaacttt
gaagatgctctcttaaatatatcagcagatagtccttatattccttatctggcctgtgtg
agaaatgtcacagacagtttggccagaggatcgcaagaaaatttaagactcctacagtcc
ataatttcatttaaaaaatcttttcttcaaaatggtttttatgaggactacttttcttca
gttcctgaagtcctgaaatcaaaactgtctcaacttcgaaacgtgaccgaacttctttgc
gaatctgaaactttcgattcaatacagagaatgtgccagctctctgacgtgaactttagg
aacctatgtgaagaaagtgcatttcatgtgcagctcctcgaagctgccgagcttggcacc
gaaatagcagccaacttactgtaccatgacgatattatatctaaaaaactgagggatttg
cttactggggatccaagcaaaattaatttaaatatggattggtttctagaacaggcactg
caaatgaattacttggaaaatatcacacagttaatgccaaccatagaggccatgctgcat
gtcaataacagcgcagacacttctgaaaagccaggtcgcttaatagaaatgtttaaaaat
gttgaagagctgaaagaagaactgaggagaacaacaggcatgtcccctaggagtattgac
agtctgctggccactcctatccctgataacagagctgagattatttctcgggtgttctgg
ttgtattcttgtgatgctaatatgacctattccaacatggaagatgagatgaaggaattc
tgcaacctgcctcttacagaaagatcccggcagtcttacctcatcggactcacccttttg
cactacttggacatttacaacttcacatacaaggtgtttttccctagggaagatcaaaag
ccagtagaaaagatgatagaactcttcatgaggctgaaagagattctcaatcagatggct
tccggcacacatccgctgctagataaaatgacatccctgagacaaatgcatctgcccaga
agtgttccattatcacaggcaatgtacagaagcaaccggatgaacacaccccaaggatca
tttagcaccatctcccaagcattgtgttcccagggaattaccactgaatatttaacggcc
atgctgccctcttctcaaaggcgaaaaggcaaccacaccaaggattttttgacttataaa
ttaagcaaagaacagattgcttccaaatatggaattcccacacataccacaccattttgc
ttctccctttataaagacatcattaatatgcctgctggacctgtgatttgggccttctta
aaacctatgttgttgggaaaaattttgtacgcaccatatacccccatcacaaaggcaata
atggaaaagtctaatgtgactctgaggcagctgtcggaattaagagaaaaatctcaagag
tggatggataactcgccacttttcatgaattccttccacctgttaaaccagacgattccc
atgctccaaaatactctaaggaacccctttgtgcaagtttttgtgaagttctctgtggga
ctcgatgctgttgaactattgaaacagatagatgaactcgatattctaaggctgaaatta
gaaaacagcattgacctcattgatcatcttaacacactatcctccctgacagtaaatatt
tcctcctgtgtattatatgaccgtattcaggcagcagaaaacgtagatgaaatggagaga
gaggccaacaggctttacaaaagcaatgaactctttggaagtgttatttttaagcttcct
tctaacagaagccaacatagacgctatgactctgaaaatgtgtctcttcctcctgtcgta
aaatataccatccgcatgagtctcaagactgcacagaccacaagaagcataaggaccaag
atttgggccccggggccacacaattctccatcacataaccagatctatggcagggctttt
gtttacttgcaggatagtattgagagagcaatcattgaattgcagactggaagaaactcc
caagaagtagcggttcaggtccaggcaattccatatccctgctacatgaaagacaacttc
ctaaccagtgtctcttattctcttccaattgtgctcatggttgcctgggttgtatttata
gctgcatttgtaaaaaagcttgtttatgagaaagatctccggcttcatgagtacatgaag
atgatgggtgtgaactcctgcagtcacttttttgcctggcttatagagagtgttggattt
ttactggtgaccatcatcatcctcatcattatactcaagtttggcaatattcttcctaag
acaaatgggttcattttgttcctgtatttttcggactatagcttctcagttatttctatg
agctatcttatcagtgtcttcttcaacaacaccaatattgcagccctgattggaagcctc
atctacatcattgccttttttccatttattgttctgattacagttgaggatgagttgagc
tatgtaataaaagtattcatgagcctgctgtcgccaacagcattcagttatgcaagtcag
tatattgcaagatatgaagagcaaggcattggtcttcagtgggaaaatatgtatagttcc
ccagttcaggatgacaccacctcatttggctggctgtgctgtctaatcctagctgactct
ttcatttatttcattatcgcgtggtacgtcaggaatgtgttcccaggtacatatggtatg
gcagctccgtggtattttccagtccttccttcctattggaaggagcgattgggatgtaca
gatgtgaagcatgagaaaagcaatggccttatgtttactaatatcatgatgcagaacacc
aatccatctgctagtaagacaagtcctgagtacatgtttccctccaacattgagcccgag
cctaaagatctcacagttggggttgccctacatggggtcacaaagatctatggctcaaaa
attgctgtcgatcacctcaatctgaatttttatgaaggacatattacttcattgctcggt
cccaacggcgccgggaaaactactacaatctccatgttgactgggctttttggggcctca
gcaggtaccatctttgtttatggaaaagatctcaaaacagacttacacactgtacggaag
aacatgggtgtctgcatgcagcacgatgtcttgtttagttacctcactaccaaagaacac
ctgctcttatatggctccatcaaagttcctcactggactaaaaagcagctgcatgaggaa
gtaaaaaggacgctaaaagatactggactatatagccatcgtcataagagagttggaaca
ttgtcaggaggaatgaagaggaagttatccatatctatagctcttattggtggatctcgg
gtggtcattttggatgaaccatccactggagttgatccatgttctcgccgaagtatatgg
gatgttatatccaagaacaaaactgccagaacaatcattctgtcgacgcaccacttggac
gaagccgaagtgctgagtgaccgtatcgccttcctggaacagggtggactgcgctgctgt
gggtcacctttttacctcaaggaagcatttggggatgggtatcacctcacactcaccaag
aaaaagagtccaaatctaagtgcaaatacaacatgcgacacgatggctgtgacagcaatg
atccgatcacatctcgctgaagcctacctcaaggaggacatcgggggagagcttgtgtat
gtgcttcctccatttagcaccaaagtctctggggcatacctgtcactcctgagggcgctg
gacaatggcatgggtgacctcaacatcgggtgctacggcatttcagataccactgtggaa
gaggtctttctgaacttgactaaagagtcacaaaaaaatagtagtatgagtcttgagcac
ttaacacaaaagaaaattggaaatcccagtaccaacggcatctcaactcctgatgattta
tctgtgagcagcagcaatttcacagacagagatgacaaaatcctgaaaagggggaaaggg
gggaaaaagaagattggctcctccctccagaggagtgagaattctcacccaagcacacaa
ggcctggtctcagcaatgtggaacttccctggcatcgacaacatgtgtttgaacatcagt
gatccaaggtgtttaaagaaaggcagtctggaaaaatggaacaccagtggggagcctgtc
actaattttggtgtttgctcctgctcagaaaatattcaggagtgtcctaaatttaactac
tctccaccgcatagaagaacttattcttctcaaataatttacaacctcactggacaccgc
ttagaaaattatcttatatcaactgctaatgaatttatgcaaaaaagatatggaggttgg
agttttggactgcctttgactaaagaccttcgttttgatataacagaagttcctgccaat
agaacacttgctaaggtatggtatgatccagaaggctatcactcacttccagcttacctc
aacagcttgaataatttcctcctgcgagttaacatgtcaaaatacgatgctgcccgacac
ggcatcatcatgtatagccatccttatccaggagtgcaagaccaagaacaagccacaatg
agcagcttaatcgatattttagtggcactctccatcctgatgggctactctgtcactact
gccagctttgtcacctatgttgtaagggagcatcagaccaaagccaagcagctgcagcac
atttcaggcatcggcgtgacatgctactgggtcacaaactttatttatgacatggccttc
tacttggtgcctgtggcattttcaattggtgtcattgcaattttcaagttacctgccttc
tacagtggaaacaacctcggtgctgtatctctcctacttctgctgtttgggtatgccaca
ttttcttggatgtacttgctggctgggctcttccatgaaaccggaatggctttcatcact
tacgtctgcatcaaccttttttttggcatcaattccattgtttccttgtcagtggtgtac
tttctttccaaggaaaagcctaatgatccgactttagaacttatttctgaaaccctcaag
cgcattttcctgatttttccacaattctgctttggctacggtttgattgaactttctcaa
cagcagtcggtcctagacttcttaaaagcatatggagtggagtacccgagtgaaaccttt
gagatggataaactaggtgcaatgttcgtggctttggtttctcagggcaccatgttcttt
ttcttgcggctcttaatcaatgaatggctaataaagaaactcagactcttcttcagaaaa
tttaattcttcgcctgtaatggagacaatagatgaagatgaagatgtgagggctgagaga
ctcagagtggagaatggtgcaggtgaatttgacctggtccagctccatcggctcacaaaa
acctatcagctgatccacaaaaagattatcgctgtaaacaacatcagcatcgggataccc
gctggggagtgctttggccttcttggggtgaatggagcaggaaagacaactatcttcaag
atgctgacaggagacataattccttcaagtggaaatattctgataagaaataaaactgga
tctctgggtcacgttgactcacacagctcattggttggatactgccctcaggaagatgcc
ttagatgacctggtgtccgtagaagaacacctgtatttctatgccaggatacatggaatt
ccagaaaaagatattaaagaaactgttcataaactccttaggagacttcacctgatgccc
tacaaggacagagctacctcgctgtgcagttatggcacaaaaagaaaattatccacagca
ctggccttgatagggaaaccttccattctactgctggatgagccgagctctgggatggat
cctaagtcgaaacggcacctctggaagatcatttcagaagaagtgcagaataaatgttca
gtcatcctcacatctcacagcatggaagaatgtgaggctctctgtaccaggttggccatt
atggtaaatggaagattccaatgtattggatctttgcagcatataaaaagcaggtttgga
cgaggatttactgtcaaggttcacttgaagaataccaaagtgagcatggataccctcaca
aggtttatgcaactgcacttcccaaaaacatacttaaaagatcagcacctcagcatgcta
gagtatcatgtgccagtcacggcaggaggagtagcaaacatttttgatctgctggaaacc
aacaagactgctttaaatatcacaaatttcttagtgagtcagactactctggaagaggtt
ttcatcaactttgccaaagatcaaaagtcctatgaaactgctgataccagtagccaaggt
tccaccataagcgttgattcacaggatgaccggatggaatcttag
DBGET
integrated database retrieval system
