Canis lupus familiaris (dog): 478903
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Entry
478903 CDS
T01007
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
478903 (SMARCAL1)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
478903 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
W02B3_4_N
Motif
Other DBs
NCBI-GeneID:
478903
NCBI-ProteinID:
XP_005640678
Ensembl:
ENSCAFG00000014421
VGNC:
46533
UniProt:
A0A8C0P2A2
A0A8I3PRK3
LinkDB
All DBs
Position
37:24193550..24253982
Genome browser
AA seq
961 aa
AA seq
DB search
MSLPLTEEQRKKIEENRQKALARRAEKLLAEQHQSSGSGSCIATNSSQSRQGLPPNLPGD
PSKPVNHGVIFMQQNLSSSSSDGQRPHHCHSFHLSAPEQTERTWKRQEDVPAACPSHSSS
GQMILTGISPPLAQSPPEVPDQQLLGCALGQGHLQASHEARSTPFANPTPESLAKAKSFQ
KTPASAFGLPPGDPRLEAKAVRPSTSGQTIAGVHCGSGSVTPRSEGRLSQKLGTAATHKA
VSSQRGTCIRSGDRFQVKIGYNEELIAVFKSLPSRSYDPATKTWNFSMTDYGALMKAAQK
LPTVTLQPLEGAGHSRESPSTGGTAQTCLPSAPSLAFVKGQCVLISRARFEADIGYSEAL
VALFKQMDSRSYDVKTRKWNFLLEEHNKLIQRVRCLPQVQLDPLPKTLTLAFASQLEKTS
PCLTQPIPEADLSGVDPKLVSSLLPFQRAGVNFAIAKRGRLLLADDMGLGKTIQAICIAA
FYQKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPERINVVVTGKDRLTAGLVNIVSFDLLS
KLEKQLKTPFKVVIIDESHFLKNIKTARCRAAMPLLKVAKRVILLSGTPAMSRPAELYTQ
IIGVRPTFFPQFHAFGLRYCDAKRQPWGWDYSGSSNLGELKLLLEEAVMLRRLKCDVLAQ
LPPKQRKMVIIAPGRISTRARAALDAVAKEMTTMDKTKQQQKEALLLFFNRTAEAKIPSV
IEYILDLLESGREKFLVFAHHKVVLSAVTRELEKKHVPHIHIDGSTSSADREDLCQQFQL
FEKHAVAVLSITAANMGLTFTSADLVVFAELFWNPGVLLQAEDRVHRIGQSSSVSIHYLV
AKGTADDYLWPLIQEKIKVLGEAGLSETNFSEMTEAPNYFYKDPKQQKIYDLFQQSFEED
GSDLELLEAAESSDPRSASGAPGNDFQDLGDTPDGTMVTGSPVKKRRFEFFDNFDSFTFP
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcctcttacagaggagcagaggaaaaaaattgaagagaaccggcaaaaggct
ctggcccgtagagctgagaaattattagcagaacagcatcagagctcaggctctggctcc
tgcattgccaccaactcttcccagtccagacagggcctgcccccaaatctccccggggat
ccttctaagccagtgaaccatggtgtcattttcatgcagcagaatctcagtagttcatct
agtgatggccaaagacctcatcattgccacagttttcacctgagtgctccagagcagaca
gagaggacctggaagaggcaagaagatgtgcccgcagcctgcccgagccacagctcatca
ggtcaaatgattctcacgggcatctctcctcccttggcgcaaagccctccggaggtcccc
gatcaacaactcttgggttgtgccttaggtcaaggtcatcttcaggcttcccacgaggcc
agatccacgccctttgctaacccaactcctgaatctttggccaaagccaagagtttccag
aagacaccagcttctgcctttggactgccacccggtgatcccaggttagaggccaaggca
gtgaggccctccacgtcggggcagaccattgctggcgtccactgtggctcagggagtgtg
acacccaggtcggaaggaagactctcacagaaattggggaccgcagccacccataaagca
gtaagctcccagaggggaacgtgcataaggagtggggatcgtttccaggtgaagatcggg
tacaatgaagagctcattgcggtttttaagagcctacccagcagaagttatgatcctgcc
accaagacgtggaacttcagcatgacggactatggtgccctgatgaaagcagcccagaag
ctccccacggtcaccctgcagcctttggaaggggccgggcacagcagggagtcaccctcc
acaggtggcacggcccagacctgcctgccttcagctccctccctggcctttgtcaaaggg
caatgcgtgctcatctcccgggcccgctttgaggcagacatcggctactctgaagctctg
gttgcgctatttaagcagatggattccagaagttacgatgtcaagaccaggaaatggaac
tttctcttggaagagcacaataaactaatccagagggtgcgctgccttccacaagttcag
ctggatcctctgcccaagaccctcaccctggcgttcgcgtcacagctagagaagacgtct
ccctgcctcacacaacccatccccgaggctgacctttctggagtggaccccaagctcgtg
tccagtctgctgcccttccagagagcaggagtcaattttgcaatagcgaagagaggccgc
ctgctgcttgctgacgacatgggcctggggaagaccatccaagccatctgcattgcggcc
ttttaccagaaggagtggccgctcctggtggtggtaccatcatctgtgcgcttcacctgg
gagcaggccttccttcggtggctgccatctctgagcccggagcgcatcaatgtcgtggtg
accggcaaggaccgcctgacagctggcttggtcaacattgtcagttttgaccttctgagc
aagttagaaaaacagctaaaaaccccttttaaagttgtcatcatcgatgagtctcacttc
ctcaagaatataaagactgcccgctgccgcgcagccatgcccctcctcaaggttgcgaag
agagtgatcctgctgtccggcacaccagccatgtcccggcctgcagagctctacacccag
atcatcggggtcaggccaactttcttccctcagtttcatgcttttggacttcgctactgt
gatgccaagcggcagccctggggatgggactattcgggctcctccaacctgggcgagctg
aagctcctgctggaggaagcggtcatgctgcgacgcctcaagtgtgatgtcctcgctcag
ctcccacccaagcagcgcaagatggtcatcattgcccccggccggatcagcaccagggcc
agagctgccctggacgccgtggccaaggaaatgaccaccatggacaaaactaaacagcag
cagaaagaagctctccttctcttcttcaacagaacagctgaagctaaaatcccatctgtc
attgaatatatcctggacctcctggaaagtggaagagagaagtttctggtgttcgcacac
cataaggtagtcctgagtgcagttacaagagagcttgagaaaaagcacgtgccacacatc
cacatcgacggctccacctcctcggcggaccgagaggacctgtgccagcagttccagctg
ttcgagaagcacgctgtggccgtgctgtccatcaccgctgccaacatgggcctcaccttc
acctcggctgacctggtggtgtttgctgagctcttttggaatccaggggtgctgcttcag
gctgaggaccgggtgcaccgaatcggacagtcgagctctgtgagcatccactacctcgtg
gcgaaaggcacagctgatgactacctctggcccctaattcaagagaagattaaagttctg
ggtgaagccggactttctgagaccaatttttcagaaatgacagaagctcctaattacttc
tacaaggacccaaagcagcagaagatctatgacctcttccagcagtccttcgaggaagac
ggaagcgacctggagctcctggaggccgcggaatcctctgaccccagaagtgcttcgggt
gcacctggaaatgatttccaggacctgggagacacgccggacgggaccatggtgaccggc
agccccgtgaagaaaaggagatttgagttttttgataactttgacagctttacctttccc
ctgtaa
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integrated database retrieval system
