Canis lupus familiaris (dog): 478973
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Entry
478973 CDS
T01007
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
478973 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfa04147
]
478973 (COPA)
Membrane trafficking [BR:
cfa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
478973 (COPA)
Exosome [BR:
cfa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
478973 (COPA)
Exosomal proteins of bladder cancer cells
478973 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
478973
NCBI-ProteinID:
XP_013966632
Ensembl:
ENSCAFG00000012544
VGNC:
39503
UniProt:
A0A8I3Q9Z2
LinkDB
All DBs
Position
38:21966684..22009488
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AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPELDIPPGAAG
GAEDGFFVPPTKGTSPAQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPHRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLCMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CKVTTVTEIGRDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccctggatcctgaccagtttacacaatggggtcatccagttatgggactaccggatg
tgtacccttattgacaagtttgatgaacatgatggtccagtacgagggattgacttccat
aagcagcagccattgtttgtctctggaggagatgactataagattaaggtgtggaattac
aagctgcggcgctgtctcttcacattgcttgggcatttagactacattcgcaccacattt
tttcatcatgaatatccctggattctgagcgcctcggatgatcagaccatcagggtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacgggacacaaccattatgtaatgtgt
gctcagtttcacccctcggaagacctggttgtgtcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttgtcccctggtgcagtggagtccgac
gtgagaggaataactggggttgatctatttggaacgacagatgcagtggtgaagcacgtg
ctggagggtcatgatcgtggagtaaactgggctgcctttcacccgactatgccccttatt
gtctctggagcagatgaccgtcaggtgaagatctggcgcatgaatgagtcaaaggcgtgg
gaggttgacacctgccgtggtcattacaacaatgtatcttgtgctgtcttccaccctcgc
caagagctgatcctcagcaattctgaggacaagagtatccgagtctgggatatgtccaag
cggactggggttcagaccttccgcagggaccacgatcgtttctgggtcctggctgcccac
cctaatctgaacctttttgcggcaggccatgatggtggcatgatcgtgtttaaactagaa
cgggaacggccagcctatgctgttcatggcaatatgctacattatgtcaaagaccgattc
ttacgtcagttggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccagtgttcaatatgtcatacaatccagcagaaaatgcagtcctattgtgt
acgagagccagcaatttagagaacagtacctatgacctgtacaccatccccaaggatgca
gactcacagaatcctgatgctcctgaagggaaacgatcttcaggcctgacagccgtttgg
gttgctagaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgtgatgagatcttttacgctggc
acaggcaatctcctacttcgagacgcagaatccatcacgctgtttgatgtacaacagaag
cgaactctggcctctgtgaagatttccaaggtgaaatatgttatctggtctgcagacatg
tcccatgtagcactactggccaaacatgccattgtgatctgtaaccgcaaactggaggct
ctgtgtaacattcatgagaacattcgcgtcaagagtggggcctgggatgagagtggggta
tttatctataccacaagcaaccacatcaaatatgccgtcaccaccggggactatggaatc
atccgaaccctggatttaccaatctatgttacgcgggtgaagggcaacaatgtgtattgc
ctggacagggaatgtcgtcctcgagtgctcaccattgatcccactgagttcaagttcaag
ctggccctgatcaacagaaaatatgatgaggtactgcacatggtgaggaatgccaaacta
gtaggccagtctatcattgcttacctgcagaagaagggctacccggaagtggcactgcat
ttcgtcaaggatgagaaaactcgctttagtctggcactcgaatgtggaaatattgagatt
gctctggaagcagccaaagcactggatgacaagaactgctgggaaaagctaggagaagtg
gccttgctacaggggaaccaccagattgtagaaatgtgttatcagcgcaccaagaacttt
gacaaactttctttcttgtacctcatcactggcaacctagagaaacttcgcaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaacgccctctacctgggg
gacgtgtctgagcgggtgcggatcctgaagaactgtgggcagaagtcactggcctatctc
acagctgccactcacggcttagatgaagaagctgagagcctgaaggagacatttgaccca
gagaaagagacgatcccagacattgatcctaatgccaagctgctccagccacctgcacct
atcatgccattggataccaattggcccttactgactgtatctaaaggcttctttgaaggc
tccattgccagcaagggcaagggaggagcactggcggctgacattgacattgacactgtt
ggcaccgagggttggggagaggatgcggagctgcagctggatgaagacgggtttgtggaa
gctacagaaggtctgggggacgatgctcttggcaagggacaggaagaaggaggcggctgg
gatgtcgaagaggacctggagctccctcctgagctggatataccccctggggcagctggg
ggtgctgaggatgggttctttgtaccccccaccaagggaaccagcccagctcagatctgg
tgcaataattctcagcttccagttgatcacatcctggcaggctcctttgaaacagccatg
cggcttcttcacgaccaggtgggggtgacccagttcggcccctacaagcaactgttcctg
cagacatatgcccgcggccgtaccacctatcaggccctgccctgcctgccctccatgtat
ggctatcctcatcgcaattggaaggatgcaggcctgaagaatggtgtgccggctgtgggc
ctgaagcttaacgacctcattcagcggctgcagctctgctaccagctcaccacagtcggc
aagtttgaggaggctgtggaaaagttccgttccattcttctcagcgtgcctcttcttgtt
gtggacaacaaacaggaaattgcagaggcccagcagctcatcaccatctgccgtgagtac
atcgtgggtttgtgcatggagatagaaaggaagaagctgcccaaggagactctggaacag
cagaagcgcatctgtgagatggcggcctatttcacccactcaaacctgcagcctgtgcac
atgatcctggtgctgcgtacggccctcaacctcttcttcaagctcaagaactttaagaca
gctgccacctttgctcggcgcctattggaactggggcccaagccagaggtggctcaacag
acccgcaaaattctgtctgcctgtgagaagaaccccacggatgcctaccagctcaattat
gacatgcacaacccttttgacatctgtgctgcatcctaccggcccatctaccgtggaaag
ccagtagagaaatgtccgctcagcggggcctgctattcccctgagttcaagggtcaaatc
tgcaaggtcactacagtgacagagattggcagagacgtcattggtttaaggatcagccct
ttgcagttccgttga
DBGET
integrated database retrieval system
