Canis lupus familiaris (dog): 478989
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Entry
478989 CDS
T01007
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03320
PPAR signaling pathway
cfa04659
Th17 cell differentiation
cfa04919
Thyroid hormone signaling pathway
cfa04920
Adipocytokine signaling pathway
cfa04928
Parathyroid hormone synthesis, secretion and action
cfa05200
Pathways in cancer
cfa05202
Transcriptional misregulation in cancer
cfa05207
Chemical carcinogenesis - receptor activation
cfa05216
Thyroid cancer
cfa05222
Small cell lung cancer
cfa05223
Non-small cell lung cancer
cfa05226
Gastric cancer
cfa05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
478989 (RXRG)
09152 Endocrine system
04920 Adipocytokine signaling pathway
478989 (RXRG)
03320 PPAR signaling pathway
478989 (RXRG)
04919 Thyroid hormone signaling pathway
478989 (RXRG)
04928 Parathyroid hormone synthesis, secretion and action
478989 (RXRG)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
478989 (RXRG)
05202 Transcriptional misregulation in cancer
478989 (RXRG)
05207 Chemical carcinogenesis - receptor activation
478989 (RXRG)
09162 Cancer: specific types
05226 Gastric cancer
478989 (RXRG)
05216 Thyroid cancer
478989 (RXRG)
05222 Small cell lung cancer
478989 (RXRG)
05223 Non-small cell lung cancer
478989 (RXRG)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
478989 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
478989 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cfa03310
]
478989 (RXRG)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
478989 (RXRG)
Nuclear receptors [BR:
cfa03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
478989 (RXRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
478989
NCBI-ProteinID:
XP_005640900
Ensembl:
ENSCAFG00000013336
VGNC:
45819
UniProt:
A0A8C0T1Q9
LinkDB
All DBs
Position
38:17922970..17968200
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AA seq
504 aa
AA seq
DB search
MQVISIDQLPIVIHVNQQKIIPSLILSCRQVLFEHLPSSRLSAGYHDGDHSRQVEIKSSP
GHSGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVGPPLNALGSPYRVITSAMGP
PSGALAAPPGINLVAPPSSQLNVVNSVSISEDIKPLPGLPGIGNMNYPSASPGSLVKHIC
AICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKDCLIDKRQRNRCQYCRYQKC
LVMGMKREAVQEERQRSRERAESEADCANSGHEDMPVERILEAELAVEPKTESYGDMNLE
NSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSV
SVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNP
DAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF
FKLIGDTPIDTFLMEMLETPLQIT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaatttctattgatcaactccctatcgtcatacacgttaatcaacaaaaaatt
atcccatctctgatcctgtcttgtcgtcaggtactttttgagcatctgccaagttccagg
ctcagtgctgggtaccatgatggtgaccattcacggcaagtggaaattaaaagctccccc
ggccactccggctccacgtccatgagcccgtcggcagccttgtccactgggaagcccatg
gacagccaccccagctacacggacacaccagtgagtgccccgcggactctgagtgcagtg
gggccccccctcaatgccctgggctctccatatcgagtcatcacgtctgccatgggcccg
ccctcgggagccctggcagcacctccaggaatcaacctggtcgccccgcccagctcccag
ctaaatgtggtcaacagtgtcagcatttcagaggacatcaagcccttgccagggcttcct
gggattggaaacatgaactacccatcagccagccctggctctctggttaaacacatctgt
gcaatctgtggggataggtcctcaggaaagcactacggtgtgtacagttgtgaaggctgc
aaagggttcttcaagagaaccataaggaaagacctcatgtacacgtgtcgcgataataaa
gactgcctcattgacaagcgccagaggaaccgctgccagtactgccgctaccagaagtgc
ctggtgatgggcatgaagagggaagctgtgcaagaagaaaggcagaggagccgggagcgg
gccgagagtgaggcagactgtgccaacagtggccatgaagatatgcctgtggagaggatt
ctagaagcggagcttgctgttgagccaaagacagaatcctatggtgatatgaacttggag
aactcgacaaatgaccctgtcaccaacatatgccatgctgctgataagcagctcttcact
cttgttgaatgggccaagcgcattccccacttctctgacctcaccttggaggaccaggtc
atcctgctccgggcagggtggaatgaattgctaattgcctccttctcccaccgctcggtc
tctgtccaggatggcattcttctggccacgggtttacacgtccaccggagcagtgcccac
agcgctggggttggctccatctttgacagagtcctgactgagctggtctccaaaatgaaa
gacatgcagatggacaagtcggagctggggtgcctgcgagccattgtgctgtttaaccca
gatgccaaggggctgtccaacccctcggaggtggagaccctgcgagagaaggtttacgcc
acccttgaggcctacaccaagcagaagtatccagaacaacctggcaggttcgccaagctg
ctgctgcgcctcccggccctgcgctccatcggcctcaagtgcctggagcacctcttcttc
ttcaagctcatcggagacacgcccatcgacaccttcctcatggagatgttggagaccccg
ctgcagatcacctga
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