Canis lupus familiaris (dog): 479028
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Entry
479028 CDS
T01007
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
479028 (CHD2)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
479028 (CHD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
479028
NCBI-ProteinID:
XP_005618379
Ensembl:
ENSCAFG00000010998
VGNC:
39200
LinkDB
All DBs
Position
3:complement(49802181..49921599)
Genome browser
AA seq
1840 aa
AA seq
DB search
MAHKQRDGYVNLSPCIFTWCHAFSQLAFDGGKLSHSASEEASGSDSGSQSESEQGSDPGS
GHGSESNSSSESSESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVY
GVRRSNRSRQEPSRFNIKEEASSGSESGSPKRRGQRQLKKQEKWKREPSEDEQEQGTSAE
SEAEQKKVKARRPVPRRTVPKPRVKKQPKTQRGKRKRQDSSDDDDEDDEAPKRQTRRRAA
KNVSYKEDDDFETDSDDLIEMTGEGADEQQDNSETIEKVLDSRLGKKGATGASTTVYAIE
ANGDPSGDFDTEKDESEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDE
IKQWLGKVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSTLGQTDFPAHSRKPAP
SNEPEYLCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRF
VALKKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLF
HQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRL
KFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSHHRLLITGT
PLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEK
SLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYL
IKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYL
TIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDS
DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTG
RTVLENNSGRSNSNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETREN
EVSTSATDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEI
YMLPRIRSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDL
VEGFTDAEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQE
YEEQLKENASEGKGPGKKRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYC
LTCRVKAAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQG
KQLQTRADYLLKLLRKSLEKKGAVTGGEEAKLKKRKPRVKKENKEPRLKDEHGVEFSSPR
HSDNPSEEGEVKDDGLEKSPMKKKQKKKENKENKEKQMSSRKDKEGDKERKKSKDKKEKP
KGGDAKSSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLD
KPDKGLNVQEQLEHTRNCLLKIGDRIAECLKAYSDQEHIKLWRRNLWIFVSKFTEFDARK
LHKLYKMAHKKRSQEEEEQKKKDDVIGGKKPFRPEASGSSRDSLISQSHTPHNLHPQKPH
LPASHGPQMHGHPRDNYNHPNKRHFSNADRGDWQRERKFNYGGGNNPPWGSDRHHQYEQH
WYKDHHYGDRRHMDAHRSGSYRPNNLSRKRPYEQYSSDRDHRGHRDYYDRHHHDSKRRRS
DEFRPQNYHQQDFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGEYKQPLPPLHPAVSDPR
SPPSQKSPHDSKSPLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggctcataaacaaagggacggttatgtgaacctgtccccgtgcatttttacttggtgc
cacgcattttctcagttggcatttgatggaggaaaactcagtcactcagcatctgaagaa
gcttccggttcagactcaggcagccagtcggagagtgagcagggcagcgatccaggaagc
ggacatggcagtgagtcaaatagcagttctgagtcttcagagagccaatcggaatctgaa
agcgagtcggcgggttctaaatcccagccagtccttccagaagccaaagagaagcctgcc
tctaagaaggaacggatagctgatgtgaagaagatgtgggaagaatatcctgatgtttat
ggggttaggcggtcaaaccgaagcagacaagaaccatcacgatttaatattaaggaggag
gcaagtagcgggtctgagagtgggagcccaaaaagaagaggccagaggcagctgaagaaa
caagaaaaatggaaacgggagccctcagaagatgaacaggagcaaggcaccagtgcagag
agcgaagcagagcaaaaaaaagtgaaagccagaagacctgtccccagaagaacagtgccc
aaacctcgagttaaaaagcagcctaagactcagcgtggcaagagaaaaagacaggattct
tctgatgatgatgatgaagacgatgaagctcctaagaggcagactcggcgcagagcagct
aaaaatgttagttacaaggaagatgatgactttgagaccgactctgatgacctcattgag
atgactggagaaggagccgatgagcagcaggataacagtgaaactattgaaaaggtctta
gattcaaggctgggaaagaaaggagccaccggagcttctactactgtgtatgcgattgaa
gctaatggagaccctagtggtgactttgacactgaaaaggatgaaagcgaagtccagtac
cttatcaagtggaagggttggtcttatatccacagcacatgggagagcgaagaatcctta
cagcagcagaaagtgaaaggactcaaaaaattagagaacttcaagaagaaagaggatgaa
atcaagcaatggttaggaaaagtctctcctgaagatgtggaatattttaactgccaacaa
gagctggcctcagagttgaacaaacagtatcagatagtcgaaagagtaattgctgtgaag
acaagcaaatctacactgggtcagacagattttccagctcacagtcggaagccggcgcct
tcaaatgaacctgagtatctatgcaaatggatgggactgccatattcagagtgcagctgg
gaagatgaagccttgattggcaagaagttccagagctgcattgacagcttccatagtcgg
aacaactcaaaaaccatcccaacaagagaatgcaaggccttgaagcagagaccacgattt
gtggctttaaagaaacagccgacatatttaggaggggagaatctggagctccgtgattat
cagctagaaggtctcaactggcttgctcattcctggtgcaaaagtaacagtgtaatcctt
gctgatgaaatgggcctaggaaagaccatccagaccatatcattcctctcctacctgttc
caccaacaccagctgtatggcccctttcttatagtcgtccctttatccaccctcacctca
tggcagagggagtttgaaatctgggcaccagagattaacgtagtggtttacataggtgac
ctgatgagcagaaatacgatacgggaatatgaatggattcattctcagactaaaaggctg
aagttcaatgcacttataacaacatacgagatcctcttaaaagataagactgtgctgggc
agtattaactgggcctttctgggagtggatgaagcccatcggttgaagaatgatgactct
ttattgtataaaactctgattgatttcaagtcccaccataggctcctgattacggggacc
cctcttcagaattccctcaaagagctctggtccttgctgcactttattatgccggagaag
tttgaattctgggaagattttgaagaggaccatgggaaagggagggagaatggctaccag
agtctccataaggtgctggagcccttcctcctccggagagtcaaaaaggatgtggagaaa
tcccttcctgccaaagtggaacagatcctcagggtggagatgtcggctctgcagaagcag
tattacaagtggatcctgaccagaaactataaggctcttgccaaagggacaagaggcagc
acatctggtttcctgaatattgtgatggagttgaaaaagtgctgtaaccactgctacctg
atcaagccccccgaggagaatgagcgagagaacgggcaggaggttcttctgtccctgatc
aggagcagtgggaagctgattctcttagataaactgttgacaaggcttcgagaaaggggc
aacagagtcctaatcttctcccagatggtcagaatgttggacatcctggctgagtacctg
acgatcaagcactaccctttccagcgtctggatggttccatcaagggagaaatccgaaaa
caggccctggaccacttcaatgcagatgggtctgaggacttctgtttcctgctctcgaca
agggctggtggcctgggaatcaatctggcttcggcggacacagttgtcatctttgactct
gactggaacccccagaacgacttgcaggcacaagcccgagcccatagaattggtcagaag
aagcaggtaaatatttatcgcttggttacaaaggggactgtggaggaggagatcattgaa
cgggccaaaaagaagatggtattggaccatctggtgattcagcgcatggatactactggt
cggacagttctggaaaacaactcgggaaggtccaactcaaatccttttaataaagaagag
ctgacagctattttgaaatttggagcagaggatctcttcaaagaacttgaaggggaggag
tcagagcctcaggaaatggacatagatgaaattttgcgcttggctgaaactagagagaat
gaagtgtcaacaagtgcaacagatgaacttctgtcacagtttaaggttgccaactttgca
acaatggaagatgaagaagagctggaagagcgtcctcacaaggactgggatgagatcatt
ccggaggagcaaaggaaaaaagtagaagaggaagagcgtcagaaggagctagaagaaatt
tacatgctgccccgaattcggagttccacgaaaaaggctcagacaaatgacagtgattct
gacactgagtccaagaggcaggcccagagatcctctgcttctgagagtgagacagatgac
tctgatgatgacaagaaaccaaagcgcagagggcgccccagaagcgtgcggaaggacctt
gtcgagggatttactgatgcagagatacgaaggttcatcaaggcatataagaagtttggt
ctccctcttgaacggctggagtgcatagcacgggatgctgagctggtggataagtctgta
gcagatctgaaacgactgggggaactgattcacaacagctgtgtgtcagcaatgcaggag
tatgaagaacagctgaaagaaaatgccagtgaggggaaaggaccagggaaaaaaagaggc
ccaacaatcaaaatatcgggggttcaggttaacgtgaaatccattatacaacatgaggaa
gagtttgagatgctgcataaatctatccctgtggaccctgaagaaaaaaaaaaatactgc
ttaacctgtcgagtgaaagctgcacattttgatgtggagtggggggtggaggatgattca
agactactgctgggaatttatgaacatggctatggaaactgggagttaattaagacggat
ccagagcttaagctaactgacaaaattctgcctgtggagacagataaaaagcctcagggg
aagcaactgcagacccgagcggactacttgctgaagctgctcaggaagagtctggagaag
aagggggctgtgacgggcggggaggaggccaaattaaagaagcggaagcctcgagtaaag
aaggaaaacaaagaacccaggctgaaagatgagcatggggttgagttttcatctcctaga
cactcagacaatccatcagaagagggagaagtaaaggatgatggcttagaaaaaagtcca
atgaaaaagaaacagaagaagaaagagaacaaggagaacaaggagaaacaaatgagttct
aggaaagacaaagaaggggacaaggaaaggaagaagtcaaaagataagaaagagaagcct
aaaggtggtgatgccaaatcttcaagtaaatcaaagcgatctcagggtcctgtccatatt
acagcaggaagtgaacctgtccccattggagaggatgaggatgatgatctggaccaggag
acattcagcatatgcaaagagaggatgaggcctgtgaaaaaggcactgaaacagttagac
aaacctgacaaggggctcaatgtgcaggaacagctggagcacacccgaaactgcctcctg
aaaattggagaccggatagccgagtgccttaaagcctactcagaccaggagcatatcaaa
ctgtggaggaggaacctatggatttttgtttccaagtttacagaatttgatgctcgaaaa
ttgcataagttatacaagatggctcataagaaaaggtctcaagaagaggaggagcaaaag
aagaaagatgatgtaattggtggtaagaagccatttcgaccagaggcctcaggctccagc
cgggactccctgatatctcagtcccacactccacacaaccttcaccctcagaagcctcac
ttgcctgcctcccacggcccacagatgcatggacacccacgagataactataatcaccct
aacaagagacactttagtaatgcagatcgaggagactggcagagggaaagaaagtttaac
tatggtggtggcaacaatcctccgtggggtagtgacagacaccatcagtatgagcagcac
tggtataaggaccaccattatggggaccggcgacacatggacgcccaccgttctgggagc
tatagacccaacaacctgtccagaaagagaccttatgaacagtacagcagtgatcgagac
cacaggggacacagagattattatgacaggcaccatcatgactctaagcggaggagatct
gatgagtttcggcctcaaaattaccaccagcaggatttccgacgaatgtctgaccaccgc
cccccgatgggctatcatggccaaggaccctcagaccattaccgctctttccacacagac
aaattgggggagtataaacagcccctgccccctctgcaccctgcagtctcagaccctcgc
tcacccccttctcagaagtctccccacgattccaagtcacccctggatcacaggtctcct
ttggagagatcattagaacagaaaaacaatccagattataactggaatgttcggaaaaca
taa
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integrated database retrieval system
