Canis lupus familiaris (dog): 479112
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Entry
479112 CDS
T01007
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X3
KO
K10754
replication factor C subunit 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03030
DNA replication
cfa03410
Base excision repair
cfa03420
Nucleotide excision repair
cfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
479112 (RFC1)
03410 Base excision repair
479112 (RFC1)
03420 Nucleotide excision repair
479112 (RFC1)
03430 Mismatch repair
479112 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfa03032
]
479112 (RFC1)
03400 DNA repair and recombination proteins [BR:
cfa03400
]
479112 (RFC1)
DNA replication proteins [BR:
cfa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
479112 (RFC1)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
479112 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
BRCT_2
Rad17
RuvB_N
AAA_30
AAA_17
AAA_33
AAA_14
AAA_18
SKI
AAA_5
AAA_16
nSTAND3
AAA_19
Zeta_toxin
RNA_helicase
AAA_7
NTPase_1
NPHP3_N
TIP49
AAA_28
Motif
Other DBs
NCBI-GeneID:
479112
NCBI-ProteinID:
XP_005618678
Ensembl:
ENSCAFG00000016068
VGNC:
45492
LinkDB
All DBs
Position
3:75609032..75683153
Genome browser
AA seq
1152 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVTETVKKNEKTKSAEETLKSKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQIKNAKKQPEKLPLASKPAKILRQDPVTYISETDEEDDFMCKK
AASKSKENGGSTHSYLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASKRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
AWKDPEERETFSSVQANLSKAGKHKSPHKVKTEQFSDGRKNCSPKKQAKCESLIGSQQHL
KSSPHKIETSPKASSKLALLKKKGESSYKETEPMTSKRKNAVELKGQTKTPKKPKSSPAK
KESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIER
DEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTMP
GKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTKKESESKRSRLTPKKDSSIKSV
KKETSVLWRCLNFEEQVAEETNDDSRARNLAGDSSENKVENLLWVDKYKPTSLKTIIGQQ
GDQSCANKLLRWLQNWHRGPPEDKKRAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTAS
LVCQELGYSYVELNASDTRSKNSLKEVVAESLNNTSITGFYSTSQHGSDGAAHSVGSKHA
LIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPR
VEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKAD
SHRAKKDIRLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYLHVKPVA
AGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQF
PTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGVE
GVQDVIALMDAYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRTYNKEVHLTPYS
LQAVKTPRHSTGPALDSEYNEELIEDDSQSDEKDQDSMETDGMIKKKTKSSKPSKSEKDK
ESRKGKGKSSKK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacctgtaaccgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaactttaaaatcaaagaaaggaata
aaggaaattaaggtaaatagttcttgtaaagaagatgactctaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcagattaaa
aatgccaaaaagcaaccagaaaaattgccattggcctctaaacctgctaaaattctacgc
caggatcccgttacatatatttcagaaacagatgaagaagatgactttatgtgtaagaag
gcagcttctaaatcaaaagagaatggaggatctacacatagttatcttgggacatcaaac
atgaaaaagaatgaagaaaacactaagaccaagaataaacctttatcaccaataaaactt
acccccacgtcagtgcttgattattttggaactgggagtgtccaaagatcagataagaag
atggtagcaagcaaaagaaaagagccttcacagaatgcagatgattccagattaaatgat
gaagccattgccaagcaattgcaacttgatgaggatgcagagttggagagacaactgcat
gaagatgaagagtttgccagaacattagctatgttggatgaagagcccaagaccaaaaag
gcttggaaggacccagaggagcgagaaacgttttcatctgtccaagccaatttaagtaaa
gcaggaaaacataaatctcctcataaagtaaaaacagaacaattttcagatggcaggaag
aactgtagtcctaagaagcaagctaaatgtgaaagtttgataggatctcagcaacatttg
aagtcatcacctcacaaaatagaaacttctccaaaagccagttccaagttggcccttttg
aaaaaaaaaggagagagttcttataaagaaacagagcctatgacttcaaaaagaaaaaat
gctgttgaattaaaaggacagacaaagactcctaagaaacccaaaagttctccagctaaa
aaagagtctataagtcctgaagattctgagaagagacgcacaaattatcaagcgtatcga
agctacttaaatcgagaaggccccaaagccctgggctccaaagaaataccaaagggagct
gaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccatcgaacga
gatgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtcagcaag
aaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataaggcagca
gccttggggacaaatattattgatgaagatggcctattaaatctgattcgaaccatgcca
ggcaagaagtctaagtacgaaatagcagttgaagctgagatgaagaaagaaaagtccaaa
ttggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaactaagaag
gaatcagaatctaaaagaagtagacttactcccaagaaggacagctctataaagtccgta
aaaaaggaaacaagtgtgctttggagatgcctgaactttgaggagcaggtggctgaggag
acaaatgacgacagccgggctaggaatttggccggtgacagcagtgaaaacaaagtggaa
aatttgctctgggtggataaatataagccaacttctctcaagaccataattggacagcaa
ggtgaccagagctgtgccaacaagctcctacgctggctccaaaattggcacaggggtccc
cctgaagacaagaaacgcgcagcaaagtttggtaagtttgctggcaaagatgatggctct
agttttaaagcagcgctgctctcaggccctccaggtgttggcaagaccaccacagcttct
ttggtttgtcaggaattgggatatagctacgtggaactgaatgcgagtgatactcggagt
aagaatagtttgaaggaggttgttgctgaatcactgaataataccagcatcacaggcttt
tattcaacttctcaacatgggtcagatggagcagcccattcagtaggctcaaaacatgct
cttatcatggatgaagtagatggcatggcaggcaatgaggacaggggaggaattcaggaa
ttaattggcctgataaaacatacaaaaattcccattatttgcatgtgcaatgatagaaat
catcctaagattcgttctttggttcattattgttttgatcttcgttttcaaagacctcga
gttgaacagattaagggtgctatgatgtctattgcatttaaagagggtttgaagatcccg
cctccggctatgaatgaaataattttgggtgccaatcaagatatcagacaggttttacac
aatctgagtatgtggtgtgcacgcagtaaggcactaacctatgaccaggccaaggctgat
tctcatagagccaaaaaggatatcagactgggcccgtttgatgttgcccggaaagtgttt
gcagctggagaggagaccgctcacatgtcacttgtggataagtcagatctcttttttcat
gattattcaatagcacccctcttcgtccaggagaactacttacatgtgaaacctgtagct
gcagggggcgacatgaaaaagcacttgatgcttttaagcagagcagcagatagcatatgt
gatggtgacctagtggaccgtcagatccggagtaagcaaaactggagtcttctgcctaca
caggccatttatgccagtgttcttcctggagagctaatgagggggtacatgacccagttt
cctactttcccaagctggttagggaagcactcatctaccggcaaacacgatcgtattgta
caggatctagcactgcacatgagtctcagaacttattccagcaaaaggactgtaaacatg
gattatctgtcacatataagggatgcacttgtacagcccttgacctcacaaggggtagaa
ggagtacaggatgttattgctcttatggatgcctactacttgatgaaagaagactttgag
aatatcatggaaattagcagctggggagggaaacctagtcccttctccaagctggatccc
aaggtgaaagcagccttcacaagaacctacaataaggaagtccaccttactccatattca
cttcaagcagtaaagacacccagacacagcacaggcccggcactggattctgaatacaat
gaagagttaattgaagatgactctcaatctgatgagaaagaccaagactctatggaaact
gatggaatgatcaagaagaagacaaaatcttcaaagccttcaaaatcagaaaaagataag
gagtccagaaaaggaaaaggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
