Canis lupus familiaris (dog): 479221
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Entry
479221 CDS
T01007
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
479221 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
479221 (JMJD1C)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
479221 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
479221
NCBI-ProteinID:
XP_005618981
Ensembl:
ENSCAFG00000013081
VGNC:
42187
UniProt:
A0A8C0PSY8
A0A8I3RQY8
A0A8P0NEX5
A0A8I3RQX1
LinkDB
All DBs
Position
4:complement(15223903..15546739)
Genome browser
AA seq
2361 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRASQNSNTVHSHYTRAQANSPRPAMNSQAALPKQNTHQ
QQQQRNTRPSKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKNKQLMNKRRKPEEDEKKL
HMKRLRTDNVSDFSESSDSENSNKRMINNSSEPKPENELKNKNTSKINGEEGKSQNNEKV
EETLIIDSQPPWDQVQEDKKREEAEKQKSVDSQLQEKMIIHSSEQATLSDHNPNDLLLQE
CNTEKTHTVELLPKEKFVSRPPTPKCVIDITNDTNSEKVAQENSSTFGLQTLQKMDPNIS
DSKHSIANAKYLETAKQDSDQSWVSDVVKVDLTQSNVRSTSSGNDHLTMEKEKNQYVSYM
SSLSAVSITEDKLHKRSPPPETIKSKLNTSVDAHKTKSNPSPEVIKPKVTHSPDSVKSKA
TYVNSQATGERRLANKIEHELSRCSFHSVPTRGNTLEATKSPLIIDKNEHFTVYRDPALV
GSETGANHISPFLNQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINTH
PLTSGPHHSVHHPHLLPAVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHQ
SPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAESSLRRNS
PSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRSLKITAHSSPPLTKSLIDHHKEELER
KAFIEPLRSVASTSAKNDLDLNRSQTGKDGLLHRHFVDPVLNQLQRQPQETGERLHKYKE
EHRRILQESIDVAPFTTKIKGLEGERDNYSKVALSSSSPKSHVIIKQDKDIECSVSDLYK
MKHSVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQSNTVAAAANPQTLTSFI
SSLSKPPPLIKHQPESEGLVGKIPDHLPHQIASHSVTTFRNDCKSPTHLTVSSTNALRSM
PALHRAPVFHPPIHHSLERKEGNYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDS
QANFKSSSEQSLSEMWKSNNNLSKEKAEWHVEKSSGKSQAAMASVIVRPPSSTKLESVPA
MQLASKDRVSERSSTGANQTDCLKPAEAGETGRIILPSVNSDSAHIKSEKSVQAVSQGSV
PSSVMSAVNTVCNTKTDVLTSAATTTSVSSWGSSEIIYSLSNTILASKSLECTSSKNVSH
SVAQMQECRVSTTAPVTPASSQTGSAVQPSPGFSGTTDFIHLKKHKAALAAAQYKSSNVS
ETEPNAVKNQTSSTSLLLDSTIVCSTINKANSVGNGQASQTTQPNYHTKLKKAWLTRHSE
EDKNTNKMENSGNSVAEIIKPCSVNLIASTSNDIQNSVDSKIIVDKYVKDDKVSRRKAKR
TYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEVEEDLKPNGVLSRSAKE
KSKLKLQSNSNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRS
KKGEEPAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELDV
ETSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWV
CQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDV
MHTLREKYGIKSHCQCTNKQNIQVGNFPAVNGVSQVLQNVLNHSNKISLCMPESQQQNNP
QNSESNGNSSPGSDISTDSKLTPPESQSPLHWLADLAEQKSREEKKENKEFALEKQIKEE
REQDNPDSPNSRTSPPASQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPSG
KSGRTMPNILDDIIASVVENKIPPNKASKINVKPELKEEPKESRKSSMEENNKLYSDIPH
SWICEQHILWLKDYKNINNWKLFKECWKHGQPAVVSGVHKKMNISLWKAESISLDFGDHQ
ADLLNCKDSIISNANVKEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMMPARYE
DLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEV
SDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDI
DKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIV
LPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHA
VKEMVRALKIHEDEVEDMEEN
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccttattccttaaatggatacagagtgagagtatatagacaagactctgcc
acccagtggtttactggcataattactcatcatgatctcttcactcgcaccatgatcgtt
atgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatgaccttt
ctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatcacggcga
aggtctcgtgccagtcaaaatagcaacacagttcacagtcattatacacgtgcccaagca
aatagtcccagaccagcaatgaactcccaagctgctctaccaaaacagaatacacaccag
caacagcaacaaagaaatactcgtccaagtaagaggaagggctcagatagcagtatacca
gatgaagagaagatgaaggaggaaaagtatgattatatagcacgaggagaaaaccctaaa
gggaaaaacaaacagttgatgaataaaagaaggaaacctgaggaggatgaaaagaaacta
catatgaaaagactacgaaccgacaatgtttcagacttttctgagagcagtgactcagaa
aattcaaataaaaggatgataaataattcctcagagccgaagccagagaatgagttgaaa
aataaaaacacttcaaagataaatggagaagaaggaaaatcccagaataatgagaaggta
gaagagacactaataatagatagccagcctccctgggatcaagtacaggaagataaaaaa
cgtgaagaagcagagaaacagaagtctgttgactctcagcttcaagaaaaaatgattatt
cattcatcagagcaggccacactttctgatcataatcctaatgatttacttcttcaggaa
tgcaataccgaaaaaacacacacagtggaattactaccaaaggagaagtttgtatctaga
ccacccacaccaaaatgtgttattgatattacaaatgacactaattcagaaaaggtggct
caggaaaactcaagtacctttggccttcagacacttcagaaaatggatcctaatattagt
gattcaaaacattctattgcaaatgcaaaatacttagaaacagcaaagcaagattctgat
cagagctgggtcagtgatgtagttaaagtagatttaacccaatcaaatgttagaagtact
tcctcaggaaatgatcacctgactatggaaaaagagaaaaatcagtatgtctcttacatg
tcttctctaagtgcagtttctatcacggaagataagctacataagcgaagcccaccccca
gagaccataaaatctaaacttaatacttcagtagatgctcacaagacaaaatcgaatccc
tcacctgaagttattaaacccaaagttacccattctcctgattctgtaaagtctaaggcc
acttatgtgaatagccaagccactggtgaaagaagactagcaaataagatagaacatgag
ttatcaagatgcagctttcattcagttcctactcgaggcaatacattggaagctacaaag
agcccgcttatcattgataaaaatgagcatttcacagtttacagagatcctgcacttgtt
gggtcagaaacaggagctaaccacatttcacctttcttaaaccagcatccctttcctctt
cattcttcatcccatagaacctgtttaaatccaggtacccatcaccctgccttaactcct
gcaccccacttacttgccggatcatccagtcaaactccattacctaccattaacacacac
cctcttactagtggtccacaccattctgttcatcacccccatttacttcctgccgtgtta
cctggagtgcctactgcctccctacttggtggccacccacgactagagactgctcatgcc
agcagcttgagccacttagcattagcacaccagcaacagcaacagttgttacagcaccag
tcacctcatcttcttggacaagcccatccttctgcttcatataatcagcttggactttat
ccaattatttggcaatatccaaatggaacacatgcatactcaggacttggtctaccttcc
tcaaagtgggttcacccagaaaatgcagttaatgctgaatcttcattaaggaggaattct
cccagtccttggttacatcaacccacccctgtgacctcagcagatggtattggattactt
agtcacattcctgtcagaccttccagtgcagagcctcatcggtctcttaaaattacagca
cattccagtccaccattgacaaaaagtttaatagatcaccataaagaagaattggagagg
aaagcttttatagaaccattacgttctgttgcatccacatcagcaaaaaatgacctggat
ctaaacagatcacagactggaaaagatggtctattgcatagacattttgtggatcctgta
ttgaatcaattacagagacaaccccaggagactggagagagattacacaaatataaggag
gaacatcgtcgaatccttcaagaaagtattgatgttgctccctttacaactaaaatcaag
gggcttgagggtgagagggacaattattccaaagtagcattgtcatcttctagccctaaa
agccatgtgatcatcaaacaagacaaagacatagaatgctcagtatcagatctttataaa
atgaagcattctgtgcctcagagtttgccccaaagtaactatttcactacattgtctaat
agtgtggtcaacgaaccaccaaggtcatatccatccaaagaggtttcaaatatttacact
gaaaaacagagtaatactgttgctgcagcagctaatcctcaaactctgacttcatttata
tcgtctctttcaaagcctccacctttaattaaacaccaaccagaaagtgaaggtttagta
ggaaagattccagatcatcttccccatcagattgcttctcactcagtaacaaccttcaga
aatgattgtaagagtcctacccatttgacagtttcttctacaaatgcactccggagcatg
cctgctttacatagagcaccagtatttcatccaccaatccatcacagcttggaaagaaag
gaaggcaactatagtagtctttcccctccaactctaaccccagtgatgcctgtaaatgct
ggtgggaaagttcaagaatcacaaaagcctccaactctaattccagagccaaaagactct
caggcaaattttaagagttcttctgaacagagtttgtcagaaatgtggaaatctaataat
aacctcagcaaagaaaaagctgaatggcatgtggagaaaagcagtggaaagtcacaggct
gctatggcatctgtcattgtacgtccaccatctagtacaaaacttgagagcgtgccagca
atgcagttagcttccaaagatcgagttagtgaaagatcttcaactggggcaaatcaaaca
gattgcctcaaaccagcagaagctggagagactggaagaatcattctgccaagtgtgaat
tcagatagtgctcacataaaatctgaaaaaagtgtccaggctgtctcacagggcagtgtt
cccagttcagtcatgtctgctgtaaatacagtgtgtaataccaaaacggatgtactcaca
tctgctgccactaccactagtgtttccagctggggtagttcagaaataatttactcttta
tcaaataccattttggcctctaaatccttagaatgtacctcttcaaaaaacgtcagtcat
tcagtggctcaaatgcaagaatgcagggtcagcaccacagctccagttacaccagccagt
agtcagacaggaagtgctgttcagcccagccctgggttctcaggcacaactgattttatc
catttaaaaaagcacaaggcagcattggctgcagctcagtataaaagtagtaatgtcagt
gagactgagcctaatgctgtaaaaaatcagacatcttcaacctcccttctcttggatagc
actatagtctgtagtacaataaacaaagcaaactctgtaggaaatgggcaagcatcccag
acaactcaacctaactaccatactaagctgaaaaaggcctggcttactagacactcagag
gaagataaaaatactaataaaatggaaaattcagggaattctgtagcagaaattattaag
ccatgttctgtcaatttaatagcctcaacatctaatgatatacaaaatagtgtagatagt
aagattatagttgataaatatgtaaaagatgataaagtcagtaggagaaaagccaaaagg
acttatgaatctggctctgaaagtggagactcagatgaaagtgaaagcaagtcagagcaa
aggactaagaggcaacctaagccaacttacaaaaagaagcagaatgatttgcagaagaga
aaaggtgaagtagaggaagatttaaaacccaatggggttctcagcaggagtgccaaagaa
aaaagtaaattgaaattacagagcaacagtaatagtgctggcatccctcgttcagtatta
aaagattggcgtaaagtcaagaagctgaagcaaactggggaatcctttttacaggatgac
tcctgctgtgagatagggcctaatttgcaaaagtgccgggagtgtagacttattcggagt
aaaaaaggagaagaaccagctcattcaccagtgttctgtagattttactactttagacga
ttgtcatttagtaaaaatggagtggtcagaatagatggtttctcttctcctgaccaatat
gatgatgaagccatgagcttatggacacatgaaaattatgaagatgatgaactagatgta
gaaacttcaaaatacatcttggatatcataggtgataaattctgtcagttagtaacatct
gaaaaaacagctttgtcctgggtgaaaaaggatgccaaaattgcctggaagagagcagtg
agaggagtccgggaaatgtgtgatgcatgtgaagcaacattgtttaacattcattgggtc
tgccaaaaatgtggatttgtggtctgcttagattgttacaaggcaaaggaaagaaagagt
tctagagataaagaactgtatgcttggatgaagtgtgtgaaaggacaaccgcatgatcac
aaacatttaatgcctactcaaattatacccggttctgttttgacagatcttctagatgtg
atgcatacccttagagaaaaatatggtattaaatcccattgtcagtgcactaacaaacaa
aatatacaagttggaaattttcctgcagtgaatggtgtatctcaagttttacagaatgtt
cttaatcacagtaataaaatttctctgtgcatgcctgagtctcagcagcaaaataaccct
cagaattctgagagtaatggcaatagcagccctgggagtgacataagcacagacagcaag
ttaactcctccagaatcccagtcaccactgcactggttagcagatcttgcagagcaaaag
tccagagaggaaaaaaaagaaaacaaagaatttgcccttgaaaagcaaattaaagaagag
agagaacaagacaatcctgattctccaaatagcagaacatcacctcctgcatcccagaat
aatgaacagggttcaactttacgagatttgctgaccacaactgctggcaagctacgtgtg
ggttctacagatgctggcattgcctttgccccagtgtattcaatgggaaccccaagtggc
aaaagtggaaggactatgccaaatattcttgatgacataattgcttcagttgttgaaaac
aaaattccaccaaataaagcctctaagataaatgtaaaaccagagcttaaagaagagcct
aaagagagcagaaaatcatccatggaggaaaacaataaattgtacagtgacataccacat
tcttggatctgtgagcagcatattctgtggcttaaggattataaaaatattaataattgg
aagcttttcaaagagtgttggaaacatggacaacctgcagtggtttctggtgtgcataag
aaaatgaacattagcttgtggaaggcggaatcaattagtcttgattttggagaccaccag
gctgatctcctgaactgcaaagacagcataatttcaaatgccaatgttaaggaattctgg
gatggttttgaagaagtttcaaaacgacaaaaaacaaaaagtggagaaacagttgtttta
aaattgaaagattgcccttcaggagaagacttcaagactatgatgccagcaagatatgag
gatcttttaaaaagtctgccattgccagaatattgtaatccggaaggaaaatttaacttg
gcctctcacttgccaggattttttgtacgccctgatctaggacccagattgtgcagtgcc
tatggtgtagctgctgctaaagatcatgacataggaacaacaaatctccatgttgaagtt
tctgatgttgtaaatattctagtctatgttggcatagcaaagggaaatggcattctctca
aaagcaggaatactcaagaaatttgaggaagaagatttggatgacattttaagaaaacga
ttgaaggactcaagtgaaatacctggtgctctgtggcatatttatgcagggaaagacatt
gataagataagggaatttcttcaaaagatttcaaaagaacagggccttgaagttctacca
gaacacgatccaatacgtgaccaaagttggtatgtgaacaaaaagctccgccaaagacta
cttgaggaatatggagtcagaacctgtactcttattcaattccttggtgatgccattgtc
ttaccagcaggagcacttcatcaggtacagaattttcacagctgtattcaggtaactgaa
gattttgtgtctccagaacatcttgtacagtcatttcatttaacacaagaactgagactt
ttgaaggaggaaatcaattacgatgataaactacaggttaaaaatatactgtatcatgca
gtcaaggaaatggtgagagctttgaagatacatgaagatgaagtagaggatatggaagaa
aactag
DBGET
integrated database retrieval system
