Canis lupus familiaris (dog): 479471
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Entry
479471 CDS
T01007
Symbol
CHRNE
Name
(RefSeq) acetylcholine receptor subunit epsilon isoform X10
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
479471 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cfa04040
]
479471 (CHRNE)
Ion channels [BR:
cfa04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
479471 (CHRNE)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
479471
NCBI-ProteinID:
XP_013968976
Ensembl:
ENSCAFG00000015838
VGNC:
39247
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Position
5:31836334..31850277
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AA seq
524 aa
AA seq
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MGKSQGLQFPFAGRLFLLYEGFSPMGMKTARASLSAHHSDGTAAVTSGGAEAKNEELHLY
HHLFDNYDPGSRPVKEPEDTVTITLKVTLTNLISLNEKEETLTTSVWIGIDWQDYRLNYS
KDDFGGVETLRVPSELVWLPEIVLENNIDGQFGVAYDANVLIYEGGYVSWLPPAIYRSTC
AVEVTYFPFDWQNCSLVFRSQTYNAEEVDFVFAVDDDGETISKIDIDTEAYTENGEWAID
FCPGLIRRPNGASAGDPGVVDIIYTLIIRRKPLFYVINIIVPCVLISGLVLLAYFLPAQA
GGQKCTVSINVLLAQTVFLFLIAQKIPETSLSVPMLGRYLIFVMVVATIIVMNCVIVLNV
SLRTPTTHAMSPRLRHVLLEQLPSLLGSSAPPEAPRAAPPPRRASSVGLLLRAEELILKK
PRSELVFEGQRHRHGAWTAAALCQSLGAAAPEIRCCVEAVNFVAESTRSQEASVEEVSDW
VRMGKALDHLCFWAALVLFGVGSSVIFLGGYFNQVPELPYPPCM
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtcccaaggacttcagtttccttttgcaggcaggttatttttgctgtatgaa
ggcttctctcctatggggatgaagacagcccgagcttccttgtcagcacatcacagtgat
gggacagcagctgtcacctcaggtggagctgaggccaagaacgaggagctgcatctgtac
caccatctcttcgacaactatgacccaggaagccggcccgtgaaggagcctgaagacacg
gtcaccatcaccctcaaggtcaccctgaccaaccttatctccctgaacgagaaggaggag
accctgaccaccagcgtctggattggaatcgactggcaggattaccgactcaactacagc
aaggacgacttcgggggcgtggagaccttgcgggtcccttcggagctcgtatggctcccg
gagattgtgctggagaacaacattgacggccagttcggcgtggcctacgacgccaacgtg
ctgatctacgagggcggctacgtgagctggctgccccccgccatctaccgcagcacctgc
gccgtggaggtcacctacttccccttcgactggcagaactgctcgctggtcttccgctcg
cagacgtacaatgccgaggaggtggacttcgtcttcgccgtggacgacgacggcgagacc
atcagcaaaatcgacatcgacaccgaggcctacacggagaacggcgagtgggccatcgac
ttctgccccgggctgatccgtcgccccaacggagcctccgctggggacccgggggtcgtc
gacatcatctacacgctcatcatccgccggaagccgctcttctacgtcatcaacatcatc
gtgccctgcgtgctcatctcgggcctggtgctgctcgcctacttcctgcccgcgcaggcc
ggcggccagaagtgcaccgtttccatcaacgtcctactcgcccagaccgtcttcctgttc
ctgatcgctcagaaaatccccgagacgtcgctgagcgtgccgatgctgggcaggtacctc
atcttcgtcatggtggttgccacgatcatcgtcatgaactgtgtcatcgtgctcaacgtg
tctctgcggacgcccaccacacacgccatgtccccgcggctgcgccacgtcctgctggag
cagctgcccagcctcctgggctccagcgcaccccccgaggctccccgggccgccccgccg
cccaggcgcgcgtcctcggtgggcctgctgctccgtgcggaggagctgatcctgaaaaag
ccgcggagcgagctcgtattcgaggggcagaggcaccggcacggggcctggactgcagct
gccctctgccagagcctgggcgccgccgcccccgagatccgctgctgcgtggaggctgtg
aacttcgtggccgagagcacacggagccaggaggcctccgtcgaggaggtgtccgactgg
gtgcgcatggggaaggccctggatcacctctgcttctgggccgccttggtgctgttcggc
gtggggtccagcgtcattttccttgggggctacttcaaccaagtgcctgagctgccctac
ccaccgtgcatgtag
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