Canis lupus familiaris (dog): 479512
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Entry
479512 CDS
T01007
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein isoform X2
KO
K10266
F-box and WD-40 domain protein 10
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfa04121
]
479512 (CDRT1)
Ubiquitin system [BR:
cfa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
479512 (CDRT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_VPS8
Beta-prop_Vps41
F-box-like
F-box
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
479512
NCBI-ProteinID:
XP_005620127
Ensembl:
ENSCAFG00000017933
UniProt:
A0A8C0Q1I8
A0A8I3MVS6
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All DBs
Position
5:complement(39247624..39283473)
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AA seq
1087 aa
AA seq
DB search
MENLDSRLRNAPYFRCEKGDSSVPVCQKCETCVLAWKIFSTKEWFQRIGEVPQKRFLVSI
LKQLDSLYLLHYFQTILQTTQGKDFIYSRSRINLSRKEGKIVKSSLNQMLDKTVEQKMRE
ILYWFGKSTHRTKANYTLLLLQMCDPKLLLTAANVIRVLFLRERNNVSGLNQDTSDLFFF
PEKDYNPQTETSGVFWAASTRNTSFPLSRTLGKENLFENTEGEASNTEGQRKSSLRCISE
MNKLFSRKVGMSKAESTPSDLLVDLDVVKDLSSGVSKYRDFIRYLPIHLSKYILSMLDKN
SLNRCTSVSQHWAALAQQVKMDLSMHTFIQNHIAFLQGSYTTGIDPNYANKLFIPVPKMT
DDGKCIRVKNQKWKLRTKNDYNLWAAYQNQETQQVQMEERNIFCGTYNIRILSDTWDRNR
VIHYSGGDLVAVSSNRKIQLLDVIQVKELPIEFRGHAGSVRTLFLCEEENFLLSGSYDLS
IRFWDLKSGACIRIFNGHQGTITCMDLYKNRLVSGARDCQVKEWDIETGKCLKTFKHKDP
ILATRINDTYIVSSCERGLVKVWHIVMAQLVKTLSGHEGAVKCLCFDQWHLLSGSADGLV
MAWSMVGKYERCLMAFKHPKEVLHVALLFLRVISACADGKIRIYNFLNGNCLKVMKANGR
GDPVLSFFIQGNRMVINTESNILMFQFENIKWQYAPDRAKQKKKDKEDDWEENGLTEILS
RSSTQVFSLKDSMSSKQTVAQESLLSKPYRSRVFLKATKVPTEVLLEAPQSQGKLKSPRR
DGKKRASPVSKEANGIDGGQESSETKSLTGDTTNEDGEKVQKEGQLKTPGDLIRRSKKKR
WQIPMSPDQFLLTVNALQQAHNSGEFAYPRRPQTQVIDAWGPSISHPRKVLSFKGKSVQH
AVDRLRWNHPPINVKQTNIPLEIQKLQPNLKNSLHSPRVQSTIPQPVIIRPRFESSLRGE
DQATSSIDGTVRNFSPLTSLQVIKPNRMLAPPMGMTTKSVKKERPRFYKTLDPFRMNTEF
MLLTVKEEKEYGEAKMKEYQAREPSGVVNPEKASKAAWIRKIKGLPIDNFMKRGKTAAPE
LGQNMFI
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctggactcaaggctcaggaatgccccctactttcgttgtgagaagggggac
agttctgtccccgtgtgccagaagtgtgaaacatgcgtcttggcttggaagatcttctct
accaaagagtggttccaaaggatcggagaggtgccccagaagcggtttctagttagcatc
ctgaagcagctggatagcttgtatctgttgcactattttcagactatcttgcagaccacg
caggggaaggatttcatctacagccgctcccggatcaacctcagcaggaaggaggggaaa
atcgtcaagtcttccctgaaccagatgttggacaaaacggtagaacagaagatgagggag
atcctgtactggtttgggaaaagcacccaccggaccaaggcaaattacacgctcttgctg
ctgcaaatgtgtgaccccaagttattgctcactgctgccaatgtcatcagagtcctgttt
ctgagagagaggaacaacgtctcaggcctcaatcaagacaccagtgatttgtttttcttc
cctgagaaagactacaacccgcagactgagacctcaggtgttttctgggcagccagcacc
aggaatacatccttccctttgtccagaactttagggaaagaaaatttgtttgagaacaca
gagggtgaagcgtctaatactgaaggacaacggaagagttcactccggtgtatttccgag
atgaataagctgttttccagaaaagtgggcatgtccaaggcagaaagcaccccctcggat
ctgttggttgacttggatgtcgtcaaagacctgtcttctggagtcagcaaataccgagac
ttcatccgttacctgcccatccacctctccaaatatattctaagtatgctggataaaaac
agcctgaacaggtgcacttctgtgagccagcactgggccgccctcgctcagcaagtcaag
atggatttgtcgatgcatactttcattcagaaccatattgccttcttgcagggatcctac
acaacgggaatcgatcccaattatgccaataagctttttatcccagttcctaaaatgacc
gatgatgggaagtgcatacgtgtgaaaaatcagaaatggaaactgagaaccaagaatgac
tacaacctgtgggccgcataccagaaccaggaaactcagcaggtccagatggaagagaga
aatatcttctgtgggacttataatatccgcattctctctgacacgtgggaccgaaacaga
gtcatccactattctgggggagatttggtggcagtgtcatccaaccgtaagatccagctt
ctagatgtcatacaagtaaaggagttacccatcgagttccgaggccatgctgggagtgtc
cgcactctcttcttgtgtgaggaggagaactttctgctaagcgggagttatgacctgagt
atcagattctgggatctgaaaagtggggcttgtatacgaatcttcaatggccaccagggg
acaatcacttgcatggatttatataagaacaggctcgtatctggagcaagagattgccag
gtgaaagagtgggacatagaaacagggaagtgtctgaagacatttaaacacaaagacccc
atcttggccaccaggatcaacgacacctacatcgtgagcagttgcgagcggggcttggtc
aaagtgtggcacattgtcatggcccagctagtaaagactctcagtggccacgagggagcc
gtgaagtgcctgtgctttgaccagtggcatctcctctcgggaagtgctgatggcctggtc
atggcctggagcatggtgggaaagtatgagcggtgcctcatggccttcaagcatccaaag
gaagtgctccacgtggctctactcttcctccgggtaatcagtgcctgtgcagatggcaag
atccgcatttacaatttcctaaatgggaactgtctgaaggtgatgaaagccaatggcaga
ggtgatcctgtgctgtccttctttattcagggcaacaggatggtgatcaacacggagagc
aatattctcatgttccagtttgagaatataaagtggcagtatgctccggaccgggccaaa
caaaagaagaaggataaagaggatgactgggaagaaaatggcctcacagaaattctctcc
aggtctagcactcaggttttcagcctgaaggactccatgtccagtaaacaaactgtggcc
caggagtccttattaagtaaaccctacaggtcccgagttttcctcaaggcaaccaaggta
cctacagaagtgttattagaggcacctcaaagtcaaggaaagttaaaatcgccccggaga
gatggcaagaagagagcaagtcctgtttctaaggaagcaaatggcatagatggtggacaa
gagagttctgaaacaaaatccctcacaggagatacaaccaatgaggatggggaaaaagta
caaaaagaaggacaactcaaaactcctggagacttgatcaggcgttcaaagaaaaagcgc
tggcaaatccctatgtcgccagatcagttccttctgacagttaatgccctgcagcaggct
cataattcaggggagtttgcctatccccggaggccccaaacccaagtcattgatgcctgg
ggaccttcaatttcccatccaaggaaggtcctgagtttcaaaggaaaatcagtccaacac
gcagtcgataggttgaggtggaaccaccctcccatcaatgtgaaacaaaccaatattccc
cttgagatccagaaactgcagcccaacctgaagaactctttgcacagtcccagggtccag
tccaccataccccagcctgtgattatccgccccagattcgagagcagcctcaggggtgaa
gaccaggcgaccagctccatcgatgggaccgtgcgcaacttcagcccattaaccagcctg
caggttattaaacccaaccgcatgctggctccaccaatgggcatgacaaccaagtctgtc
aagaaagaacgacctcgcttctacaagacccttgatccctttagaatgaacactgagttc
atgttgttgacggtaaaggaggagaaagagtatggggaagccaagatgaaggagtatcag
gccagagagcccagtggagtggtcaatccagaaaaagccagcaaagctgcatggatcagg
aaaatcaaagggctacctatcgataatttcatgaagcgagggaaaacagcagcccctgaa
cttggacaaaacatgtttatctga
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