Canis lupus familiaris (dog): 479600
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Entry
479600 CDS
T01007
Name
(RefSeq) calsyntenin-1 isoform X5
KO
K22659
calsyntenin 1
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cfa04515
]
479600
Cell adhesion molecules [BR:
cfa04515
]
Cadherins
Cadherin related
479600
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
Toxin_R_bind_N
EphA2_TM
V_ATPase_I
Cadherin_C_2
SID-1_RNA_chan
PFF1_TM
Zip
Motif
Other DBs
NCBI-GeneID:
479600
NCBI-ProteinID:
XP_005620559
Ensembl:
ENSCAFG00000019740
UniProt:
A0A8C0MP39
A0A8I3Q5E8
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All DBs
Position
5:complement(62952722..63108259)
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AA seq
981 aa
AA seq
DB search
MLRRPAPALAPAAWLLLAGLLSGGVVWAARVNKHKPWLEPTYHGIITENDNAVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCEL
QKDYTFTIQAYDCGKGPDGTSVKKSHKATVHIQVNDVNEYAPVFKEKSYKATIIEGKQYD
SILRVEAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKRRAAEDVLVKVSIKPTCSPGWQGWNNRIEYEPGTGTLALFPNVHLETCDESVASVQ
ATVELETGHIGKGCDRDTYSEKSLHQLCGAASGTAELLPSPSGSSNWTVGLPTDNGHDSD
QVFEFNGTQAVRVPDGIVSVNPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSL
YVHGCRLIFLLRQDPSEEKKYKPAEFHWKLNQVCDEEWHHYVLNVEFPSVILYVDGVSHE
PFSVTEDYPLHPSKIETQLVVGACWQEYPAFENDNETEPVPMASAGGDLHMTQFFRGNLA
GLTIRSGKLADKKVIDCLYTCKEGLDLQVPEDSSRGVKIHTNPSQLALTLEGDDVGELDK
AMQHVAYLNSRQFPTPGIRRLKITSTVKCFNEAACISVPPVDGYVMVLQPEEPKISLSGV
HHFARAASEFESPEGVFLFPELRIISTITREVEPEGEGDEDPTVQESLVSEEIVHDLDTC
EVTVDGEELNPAQESLEVDMARLQQKGIAVSGSDLGMVFTGVDTMASYEEVLRLLRYRNW
HTRSLLDRKFKLVCSELNGRYVSNEFQVEVNVIHAASPMEHASHMAAQPQFVHPEHHAFV
DLSGHNLASPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEH
GDQQNVNRQQQLEWDDSTLSY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcacccgcgctggccccggccgcctggctgctgctggccgggctg
ctgagcggcggcgtggtctgggccgcgcgagttaacaagcacaaaccatggcttgagccc
acctatcatggcataatcacagaaaatgataatgcagtgctcctcgaccctcctctgatt
gccctggataaagacgcacctctgcgattcgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcatgggcagaatgtcccctttgatgcagtggta
gtggataagtccactggtgagggaataattcgctcaaaagagaaactggactgtgagctg
cagaaagactacacattcaccatccaggcctatgactgcggcaaggggccggatggcacc
agcgtgaaaaagtctcataaagcaactgtccatattcaggtgaacgacgtaaatgaatat
gcgccagtgttcaaggagaagtcctacaaggcgaccatcatcgagggcaagcagtacgac
agcatcctgagggtggaggccgtggacgcggattgctcccctcagttcagccagatttgc
agctatgaaatcgtcactccagatgtgccatttgccatcgacaaagatggttatataaaa
aacacagagaagctaaactacgggaaggagcaccagtataagctgacagtcactgcctat
gactgtgggaagcgaagagcagcggaagatgtgctggtgaaggtcagcatcaagcccacc
tgcagccccgggtggcaaggatggaacaataggatcgagtatgaacctggcacaggcact
ttggccctcttcccaaatgtccacctggaaacgtgtgatgaatctgtggcttcggtgcag
gcaacggtggagctggagactggccacatcgggaaaggctgtgaccgtgacacctactcg
gagaagtcccttcaccagctatgtggtgctgcgtctggcactgccgaactgctcccttcc
ccaagtgggtcttcgaactggaccgtcggcctccccactgacaatggccatgacagtgac
caggtcttcgagttcaatggcacgcaggcagtgagggtcccagatggcattgtctcagtc
aacccgaaggaaccttttacgatttctgtgtggatgaggcacgggccttttggcaggaag
aaggagacgattctttgtagttcggacaaaacagacatgaaccggcaccattattctctc
tatgtccatggctgccggctgattttcctcctccgtcaggatccttcggaagagaagaag
tataaacctgcggaattccactggaagttgaatcaggtctgtgatgaggagtggcaccac
tacgtcctcaatgtagaattcccaagcgtgattctctatgtggacggtgtttctcacgag
cccttctctgtcaccgaggattacccacttcatccatccaagatcgaaactcagctcgtg
gttggggcctgctggcaagagtatccagcatttgaaaatgacaatgaaaccgaacctgtg
cctatggcctctgcaggtggtgacctgcacatgacccagtttttccgaggtaatctggct
ggcctaaccatccgttctgggaaactcgcggacaagaaggtgattgactgtctgtatacc
tgcaaagaagggctggacctgcaagtccctgaggacagcagtagaggcgtgaagatccat
accaaccccagtcagttggcattgaccttggagggagacgatgttggggagctggataag
gccatgcagcacgtcgcctatctgaactcacggcaattccccacacctgggatccgaaga
ctcaaaatcaccagcacggtcaagtgttttaacgaggccgcctgcatctccgtgccccca
gtggatggctacgtgatggtgttgcagccggaagagcccaagatcagcctgagtggggtc
caccattttgctcgagcggcttctgagtttgaaagcccagaaggagttttccttttcccc
gagcttcggatcatcagcaccatcacaagagaagtggagcctgaaggggaaggggacgag
gaccccacagttcaagagtcgctggtgtctgaggagatcgtgcacgacctggatacctgc
gaggtcacggtggacggggaggaactgaacccagcccaggagagcctggaggtggacatg
gcccgcctgcagcagaagggcattgcagtgagcggctccgacctgggcatggtctttaca
ggtgtggacaccatggccagctacgaggaggttctacgcctcctgcgctatcggaactgg
cacaccaggtctctgcttgaccggaagttcaagctcgtctgctcggagctgaatggccgc
tatgtcagcaacgagtttcaggtggaggtgaacgtcatccacgcggccagccccatggag
cacgccagccacatggctgcccagccgcagtttgtccacccggagcaccatgccttcgtt
gacctctcgggtcacaacctggccagcccccacccgttcgcagttgtccccagcaccgcc
actgttgtgatcgtggtgtgtgtcagcttcctggttttcatgattatcctgggagtgttc
cggatccgggctgcacatcagcgaaccatgcgggaccaggacaccgggaaggagaatgag
atggattgggatgactctgccttgaccatcactgtaaaccctatggagacatatgaggac
cagcacagcagtgaggaggaagaagaggaggaggaggaagaagagagtgaggatggggaa
gaggaggatgacatcaccagtgccgagtcggaaagcagcgaggaggaggagggggagcac
ggggaccagcagaacgtgaacaggcagcaacagctagagtgggatgactccaccctcagc
tactga
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