Canis lupus familiaris (dog): 479684
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Entry
479684 CDS
T01007
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X2
KO
K23195
transcriptional repressor CTCF
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
479684 (CTCF)
03036 Chromosome and associated proteins [BR:
cfa03036
]
479684 (CTCF)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
479684 (CTCF)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
479684 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Actin_micro
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
479684
NCBI-ProteinID:
XP_013969561
Ensembl:
ENSCAFG00000020355
VGNC:
39690
LinkDB
All DBs
Position
5:complement(81798220..81853471)
Genome browser
AA seq
735 aa
AA seq
DB search
MAGIEEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDTCHLPQNQTDGGEVVQ
DVNSSVQMVMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGE
LQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGAN
GEVETLEQGELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQ
QEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDER
PHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFK
CSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYIC
HARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYC
DAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTF
RQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETK
KSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRR
GRPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGEEEEAQPAATDAP
NGDLTPEMILSMMDR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatagaggaaggggaaatggaaggtgaggcggttgaagccattgtggaagag
tctgaaactttcattaaaggaaaggaaagaaagacttatcagagacgccgggaagggggc
caggaagaggatacttgccacctaccccagaaccagactgatgggggtgaggtggtccag
gatgtcaatagcagtgtacagatggtaatgatggaacaactggatcctacccttcttcag
atgaagactgaagtaatggagggtacagtcgctccagaagcagaggctgctgtggacgat
acccagatcataactttgcaggttgtaaatatggaagaacagcctataaacataggagag
cttcagcttgtccaagtacctgttcctgtgactgtacctgttgctaccacttcagttgag
gaacttcagggggcttatgagaatgaagtatctaaagagggccttgcagaaagcgaaccc
atgatatgtcacaccttacctttgcctgaagggtttcaagtggtgaaagtaggtgccaat
ggagaggtggagacgctagagcaaggggaacttccacctcaagaagatcctagttggcaa
aaagacccagattatcagccaccagccaaaaaaacaaagaaaaccaaaaagagcaaactg
cgttacacagaggaaggcaaagatgtggatgtgtctgtctatgattttgaggaagaacag
caggagggcctgctgtcagaggttaatgcagagaaagtagttggtaacatgaagcctcca
aaaccaacaaaaattaaaaagaaaggtgtaaagaagacattccagtgtgagctttgcagt
tatacatgtccacggcgttcaaatttggatcgtcacatgaaaagtcacactgatgagaga
ccacacaagtgccatctctgtggcagggcattcagaacagtcaccctcctgaggaatcac
cttaacacacacacaggtactcgtcctcacaagtgcccagattgtgacatggcctttgtg
actagtggagaattggtgcggcatcgtcgttataaacacacccatgagaagccatttaag
tgttccatgtgcgattacgccagcgtagaagtcagcaaattaaaacgtcatatccgttct
catactggagagcgtccgttccagtgcagcttgtgcagttacgccagcagggacacatac
aagctgaaaaggcacatgagaacccattcaggggaaaaaccttatgaatgttatatttgt
catgctcggtttacccaaagtggtaccatgaagatgcacattttacagaagcacacagaa
aatgtggccaaatttcactgtccccactgtgacactgtcatagcccgaaaaagtgatttg
ggtgtccacttgagaaagcagcattcctatattgagcaaggcaagaaatgtcgatactgc
gatgctgtgtttcatgagcgctatgccctcatccagcatcagaagtcacacaagaatgag
aagcgctttaagtgtgaccagtgtgattatgcttgcagacaggagaggcacatgatcatg
cataaacgtacacacaccggggagaagccttatgcctgcagccactgcgacaagaccttc
cgccagaaacagctcctcgacatgcacttcaaacgctatcatgaccccaactttgtccct
gcggcctttgtctgttctaagtgtggaaaaacatttacacgccggaataccatggcaaga
catgctgacaattgcgctggtccagatggcgtagaaggggaaaatggtggggagacaaag
aagagtaaacgtggcagaaaaagaaagatgcgttccaaaaaagaagactcctctgacagt
gaaaatgctgagccagacctggatgacaatgaggatgaggaagaacctgctgtggaaatt
gaacccgagccagagcctcagcctgtgaccccagccccaccacctgccaagaagcggaga
ggacgccctcctggcagaaccaaccagcccaaacagaaccagccaacagccatcatccaa
gtggaagatcagaatacaggtgcaattgagaacattatagttgaagtcaaaaaagagcca
gatgcagagcccgtagagggggaggaagaggaggctcaaccagctgccacagacgccccc
aacggagacctcacgcccgagatgatcctcagcatgatggaccggtga
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