Canis lupus familiaris (dog): 479751
Help
Entry
479751 CDS
T01007
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03430
Mismatch repair
cfa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
479751 (PMS2)
03460 Fanconi anemia pathway
479751 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfa03400
]
479751 (PMS2)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
479751 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
479751
NCBI-ProteinID:
XP_013969771
Ensembl:
ENSCAFG00000015559
VGNC:
54058
UniProt:
A0A8C0SHR0
LinkDB
All DBs
Position
6:complement(13036823..13064755)
Genome browser
AA seq
892 aa
AA seq
DB search
MGGREAEPPWERRRELSRVQEAGRVLDPWSEPKGRELAKAIKPIDRKSVHQICSGQVVLS
LSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCGVKEENFEGLTLKHHTSKIQD
FADLTQVETFGFRGEALSSLCALSDVTISTCHTSAKVGTRLAFDHNGKIVQKTPHPRPRG
TTVSVQQLFYTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISVGIRISCSNQVGQGRRQLV
VCTSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLNRADVLHSRFHISGFIS
HCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMYNRHQYPFIVLNISVDSECIDI
NVTPDKRQILLQEEKLLLAVLKTSLIAMFDSNVNKLTVSQQPLLDIEGHVIKTHQAEMDK
PLAEKQDSPALFRTEGEEKRAVTISRLRENFSLRHTTENRSRGPQTPESRQISPRQKRHI
QLPGALHSPCTPRPVPDTNSCGPQEVVRHLDEGPCGRSNRVDIEQESGPSHLSGGLGEGL
SAPEAGSHSGGVSAACAPEDTLSQGSAESPEIDHHPADAGGQLDHENSGQTCRISPQPAD
MSFSNTKRFKKDGAPLNSDAHPGLVKTRNTPASQVDVAVKINKKVVPLAFSMRSLAKQIK
QLRQQGQQREGEQNCRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITK
LKADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAILIENLEIFRKNG
FDFVIDEGAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFASR
ACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVISQN
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcagggaggcggagcctccgtgggagcggcggcgggaactgtcccgagtccag
gaggcgggtcgggttctggatccatggagcgagccgaagggccgagaacttgctaaggcc
atcaaacctatcgatcggaagtcagtccatcagatttgttctggacaagtggtactgagt
ctaagtactgctgtgaaggagttggtagaaaatagtgtggatgctggagccactaatatt
gatctaaagcttaaagactatggggtggatttcattgaagtttcagacaatggatgcgga
gtcaaagaagaaaactttgaaggcttaactctgaaacatcacacttctaagattcaagac
tttgctgacctaactcaggttgaaacttttggctttcgaggggaagctctgagctcactt
tgtgcactgagtgacgtgactatttctacctgccacacatctgcaaaggtcggaactcgg
ctggcatttgatcacaatgggaaaattgtccagaaaaccccccatccacgacccagaggg
acaaccgttagcgtacagcagctattttatacactccctgtgcgccataaggagtttcaa
aggaatattaagaaggagtatgccaaaatggtccaggtcttacatgcatactgcatcatt
tcagtgggcatccgtatcagttgcagcaatcaggttggacaaggaagacggcagctggtg
gtatgcacaagtggaagctccagcgtaaaggaaaatattggatcggtgtttgggcagaaa
cagctgcaaagcctcattccttttgttcagctgccccctagtgactccgtttgtgaagag
tatgggttgaaccgtgctgatgttctgcattcacggtttcacatctcgggcttcatctct
cactgtgctcatggtgttggaagaagttcaacagacagacagtttttcttcatcaatcgg
cggccttgtgacccagcaaaggtctccagactcgtgaatgaggtctatcacatgtataat
cgacatcagtatccatttattgttcttaacatttctgttgattcagaatgtattgatatc
aatgttaccccagataaaaggcaaattttactacaagaggagaagcttttgttggcagtt
ttaaagacgtctttgatagcaatgtttgatagcaacgtcaacaaactcactgtctctcag
caaccattgttggatattgaaggtcatgtaataaaaacgcatcaggcagaaatggacaag
cccctggcagaaaaacaggatagtcctgctttgttcaggaccgaaggagaagagaaaagg
gctgtgaccatctccagactgagagagaacttttctcttcggcacacaacagagaacagg
tctcggggcccccagacccctgaatcaaggcagatctccccaagacagaaaaggcacata
cagttgcctggcgctttgcactccccctgcaccccgaggcccgtccctgacaccaactca
tgtggtcctcaggaggtggtgagacatttggatgagggcccctgtggccgcagtaacagg
gtggacatagaacaggaatccgggcccagccacctgtcaggtggcctgggggaagggctg
agcgccccagaagcgggcagtcactctggcggggtgtctgctgcttgcgcccctgaggac
acgctttcacaaggaagtgcagagtcacctgagatcgaccatcaccctgctgatgccgga
ggccagctcgaccatgagaacagtggccagacatgtcgaatctcgcctcagcctgcagac
atgtccttctcaaacacaaagcgttttaaaaaagatggagcgcctctaaattctgatgcc
cacccagggctggtgaagactcggaacacgccagcgtctcaggttgatgtggctgttaag
atcaataagaaagtagtgccccttgccttttctatgcgctccctagctaaacagataaag
cagttgaggcagcagggacagcaaagagaaggcgagcagaactgtaggaagttcagggcc
aagatttgccctggagaaaaccaggctgcggaagatgaactaagaaaggagataagtaaa
acaatgttcgcagaaatggagatcattggtcagtttaacttgggatttataatcaccaaa
ctgaaggcagacatcttcatagtggaccagcacgccacggatgagaagtacaactttgag
atgctgcagcagcacacggtcctccaaggccagaggctcatagcaccccagactctcaac
ttaacggctgtcaatgaagctattctaatagaaaacctggaaatattcagaaagaatggc
tttgattttgttatcgacgaaggagctccagtcactgaaagagctaagttgatttccttg
ccaactagcaaaaactggacctttggaccccaggacatcgatgaactgatctttatgctg
agtgacagtcctggggttatgtgccgtccttcccgggtcaggcagatgtttgcctccaga
gcctgtcggaagtctgtaatgattggaactgctcttaatacaagtgagatgaagaagttg
attacccacatgggcgagatggaccatccttggaactgtccccacggaaggccaaccatg
agacacattgccaacctggatgtcatttctcaaaactga
DBGET
integrated database retrieval system
