Canis lupus familiaris (dog): 479846
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Entry
479846 CDS
T01007
Symbol
GSPT1
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
479846 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
479846 (GSPT1)
03012 Translation factors [BR:
cfa03012
]
479846 (GSPT1)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
479846 (GSPT1)
Translation factors [BR:
cfa03012
]
Eukaryotic type
Release factors
479846 (GSPT1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
479846
NCBI-ProteinID:
XP_038402738
Ensembl:
ENSCAFG00000018856
VGNC:
41533
LinkDB
All DBs
Position
6
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AA seq
643 aa
AA seq
DB search
MDPGSGGGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGGGPSAAAAAAAA
AEAQPRGPLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQPPPPAAASHGAGSGAGG
APAPVEPSQEEQSLLCEGSNSAVSMELSEPVVENGETEMSPEESWEHKEEISEAELGGCS
MGDGRAAEESAQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMY
LTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTI
LDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLI
VLINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFC
PWYTGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMP
NKHNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQ
IVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIAR
LRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagcggcggcggcggcggcggcggcggcggcggcgggagcagcagcggc
agcagcagcagcgactcggcgcccgactgctgggaccaggcggacatggaggcgcccggg
ccgggaccgtgcggcggcggcggcggcggcccctcggcggcggcggcggcggcggcggcg
gccgaggcccagccccgggggcccctcagcgcggccttcagccggcagctcaacgtcaac
gccaagcccttcgtgcccaacgtccacgccgccgagttcgtgccgtccttcctgcggggc
ccggcccagccgccgccgcccgccgccgcgagccacggagccggcagcggcgcgggaggc
gctccggcacctgtggaaccttctcaagaggaacagtcattattatgtgaaggttcaaat
tcagctgttagcatggaactttcagaacctgttgtagaaaatggggagacagaaatgtcc
ccagaagaatcatgggagcacaaagaagaaataagtgaagcagagttagggggttgttcc
atgggagatggaagagctgctgaggagagtgcccaagaaatgatggaggaggaagaggaa
ataccaaaacccaaatctgtggtcgcgcccccgggggctccaaaaaaagaacatgtaaat
gtggtattcattgggcatgtagatgctggcaagtcaaccattggaggacaaataatgtat
ttgaccggaatggttgacaaaaggacactcgagaaatacgaaagagaagctaaagagaaa
aacagagaaacttggtatttgtcttgggccttagacacaaatcaggaagaacgagacaag
ggtaaaacagtagaagtgggccgtgcctattttgaaacagaaaagaagcatttcacaatt
ctggatgcccctggccataagagttttgtcccaaatatgattggtggtgcttctcaagca
gatttggctgtactggtcatctctgctagaaaaggagagtttgaaactggatttgaaaaa
ggcggacagacaagagaacatgcaatgttggcaaagacggcaggtgtcaaacacttaatt
gtgctcatcaataagatggatgatccaacggtaaattggagcaatgagagatacgaagaa
tgtaaagagaaactagtgccatttttgaaaaaggttggcttcaatcccaaaaaggacatt
cactttatgccctgctcaggactcactggagcgaatctaaaagagcaatcagatttctgt
ccttggtacactggattaccgtttattccatatctggataatttgccaaacttcaataga
tcagttgatggaccaatcaggctgccaattgtggataagtacaaggatatgggcactgtg
gtcctgggaaagctggaatcaggatctatttgtaaaggccagcagcttgtgatgatgcca
aacaagcacaatgtggaagttctcggaatcctttctgatgatgtagaaactgattctgta
gccccaggtgaaaacctcaaaatcagactgaaaggaattgaagaggaggagattcttccg
ggattcatactttgtgatcctaataatctttgtcattctggacgcacatttgatgcccag
atagtgattatagagcacaaatccatcatctgcccaggttataatgcggtgctgcatatt
cacacctgtattgaggaagtcgaaataacagccttaatctgcttggtagacaaaaaatca
ggagaaaaaagtaagactcgaccccgttttgtgaaacaagatcaagtatgcatcgcccgc
ttaaggacagcaggaaccatctgccttgagacctttaaagacttccctcagatggggcgc
tttaccttaagagacgagggtaaaaccattgcaattgggaaagttctgaaactggttcca
gagaaagactaa
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