Canis lupus familiaris (dog): 479871
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Entry
479871 CDS
T01007
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
479871 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
479871 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
479871 (THOC6)
03041 Spliceosome [BR:
cfa03041
]
479871 (THOC6)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
479871 (THOC6)
Spliceosome [BR:
cfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
479871 (THOC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_NOL10_N
WD40_Prp19
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR36-Utp21_1st
WDR54
WD40_MABP1-WDR62_2nd
TRM82_WD
ASA1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
DSE1_N
CFAP251_N
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
479871
NCBI-ProteinID:
XP_536996
Ensembl:
ENSCAFG00000019317
VGNC:
47352
UniProt:
A0A8I3MPA7
LinkDB
All DBs
Position
6
Genome browser
AA seq
341 aa
AA seq
DB search
MERAVPHAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYVHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWISCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPIRVPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSSRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgctgtgccacacgcggtacctctgggtcagatggaagtgtttcaggctctg
cagcggctccacatgaccattttttcccagagtgtctccccctgcgggaagttcctggca
gctggcaacaattacgggcagatagccatcttcagcttgtctgctgctctgagttctgag
gccaaagaagaaagtaagaagccagtggtgacattccaagcccatgatggaccggtctac
agcatggtctccacagatcgacatctgctcagtgctggggatggggaagtgaaggcctgg
ctttgggcagagatcctcaagaagggttgtaaggagctgtggcggcgtcagcccccatac
aggaccagcctagaagtgcctgagatcaatgctttgcttctcgtccccaaggagaattct
ctcatcctggcagggggagactgtcagttgcatacaatggaccttgagactgggaccttc
acacgggccctccggggccacacagactatgtccactgcctggcgctgcgggagcggagt
cccgaggtgctgtcaggtggagaggatggagctgtgcgactttgggacctccgcacagcc
aaggaagtccagaccatcgaggtatataagcatgaggagtgctcgaggccacacaatggg
cgttggatcagctgtttggcaactgactcagactggatggtctgcggaggaggcccagcg
ctcaccctctggcacctccgatcctccacacccacgactattttccccatacgggtgcca
cagaaacatgttaccttctaccaggacctgattctgtcagctggccagggccgctgtgtc
aaccagtggcagctgagtggggagctcaaggcgcaggtgcctggctcctccccagggctg
cttagccttagtctcaaccagcagccagcagcacccgagtgcaaggtcctgacagccgca
ggtaacagctcccgagtggatgttttcaccaatctcggctaccgcgccttctccctgtcc
ttctga
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integrated database retrieval system