KEGG   Canis lupus familiaris (dog): 479871
Entry
479871            CDS       T01007                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa03013  Nucleocytoplasmic transport
cfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    479871 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    479871 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfa03019]
    479871 (THOC6)
   03041 Spliceosome [BR:cfa03041]
    479871 (THOC6)
Messenger RNA biogenesis [BR:cfa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     479871 (THOC6)
Spliceosome [BR:cfa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    479871 (THOC6)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_NOL10_N WD40_Prp19 WDR55 Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_Gbeta NBCH_WD40 Beta-prop_IP5PC_F Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st WDR54 WD40_MABP1-WDR62_2nd TRM82_WD ASA1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 DSE1_N CFAP251_N Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 479871
NCBI-ProteinID: XP_536996
Ensembl: ENSCAFG00000019317
VGNC: 47352
UniProt: A0A8I3MPA7
LinkDB
Position
6
AA seq 341 aa
MERAVPHAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYVHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWISCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPIRVPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSSRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgcgctgtgccacacgcggtacctctgggtcagatggaagtgtttcaggctctg
cagcggctccacatgaccattttttcccagagtgtctccccctgcgggaagttcctggca
gctggcaacaattacgggcagatagccatcttcagcttgtctgctgctctgagttctgag
gccaaagaagaaagtaagaagccagtggtgacattccaagcccatgatggaccggtctac
agcatggtctccacagatcgacatctgctcagtgctggggatggggaagtgaaggcctgg
ctttgggcagagatcctcaagaagggttgtaaggagctgtggcggcgtcagcccccatac
aggaccagcctagaagtgcctgagatcaatgctttgcttctcgtccccaaggagaattct
ctcatcctggcagggggagactgtcagttgcatacaatggaccttgagactgggaccttc
acacgggccctccggggccacacagactatgtccactgcctggcgctgcgggagcggagt
cccgaggtgctgtcaggtggagaggatggagctgtgcgactttgggacctccgcacagcc
aaggaagtccagaccatcgaggtatataagcatgaggagtgctcgaggccacacaatggg
cgttggatcagctgtttggcaactgactcagactggatggtctgcggaggaggcccagcg
ctcaccctctggcacctccgatcctccacacccacgactattttccccatacgggtgcca
cagaaacatgttaccttctaccaggacctgattctgtcagctggccagggccgctgtgtc
aaccagtggcagctgagtggggagctcaaggcgcaggtgcctggctcctccccagggctg
cttagccttagtctcaaccagcagccagcagcacccgagtgcaaggtcctgacagccgca
ggtaacagctcccgagtggatgttttcaccaatctcggctaccgcgccttctccctgtcc
ttctga

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