Canis lupus familiaris (dog): 480171
Help
Entry
480171 CDS
T01007
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X2
KO
K15623
protein SSXT
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03082
ATP-dependent chromatin remodeling
cfa05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
480171 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
480171 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
480171 (SS18)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
480171 (SS18)
GBAF(ncBAF) complex
480171 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
480171
NCBI-ProteinID:
XP_003434973
Ensembl:
ENSCAFG00000018147
VGNC:
46823
UniProt:
A0A8C0SS18
A0A8I3NQC6
LinkDB
All DBs
Position
7:61924505..62005264
Genome browser
AA seq
387 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPIQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPIGSYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQ
QQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYR
PTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcgcagccccgaggcagcgaggcaagggggagatcacccccgccgcg
atccagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcagcagatgttgcatacgaacttggtctac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tctcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctattcagggacctggaccc
aatcaactgaatatgacaaacagttccatgaacatgccttcaagtagccatggatccatg
ggaggttacaaccattctgtgccatcatcacagagcatgccagtacagaatcagatgaca
atgagtcaagggcaaccaataggaagctatggccccagaccaaatatgaacatgcaacca
aaccaaggtccaatgatgcatcagcagcctccttcacaacaatacaatatgccacaggga
ggtgggcagcattatcaaggccagcagcctcccatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatgggtcagagacagattcctccttatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggaaattcacaatatggccaa
cagcaagatgcctaccaaggaccacctccccaacagggatatccaccccagcagcagcag
tacccagggcagcagggctatccaggacaacagcagggctatggcccttcgcagggtggt
ccaggtcctcagtatcctaactacccacaaggacaaggtcagcaatacgggggttataga
ccaacacagcctggaccaccacagccgccacagcagaggccttacggatatgaccaggga
cagtatggaaattaccagcagtga
DBGET
integrated database retrieval system
