Canis lupus familiaris (dog): 480230
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Entry
480230 CDS
T01007
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
480230 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
480230 (CPSF2)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
480230 (CPSF2)
U7-dependent histone pre-mRNA processing factors
480230 (CPSF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
480230
NCBI-ProteinID:
XP_537353
Ensembl:
ENSCAFG00000010909
VGNC:
39574
UniProt:
A0A8C0LT83
A0A8I3PD41
LinkDB
All DBs
Position
8:1383120..1417297
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AA seq
782 aa
AA seq
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MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKMKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctctctggggttcaagaagagtctgctctttgc
tatcttctgcaagttgatgagtttagatttctgttggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcatgttcaccaaattgatgcagtactgttg
tctcaccccgatcctctgcatcttggtgccctcccgtacgccgtcggaaagctgggtctg
aactgtgctatctacgcaaccattccggtttataaaatgggacagatgttcatgtatgat
ctttaccagtctcgacacaatacagaagactttacactctttacattagatgatgtggat
gcagcctttgataagatacagcagttaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttacgcagttgactttaaccacaagagg
gagatccatttaaatggatgttccctggaaatgctaagcagaccctccctgcttatcaca
gattcatttaatgctacatatgtgcagcctaggagaaaacagagagacgagcaacttctg
acaaatgtcctggaaacgcttcgaggtgatggaaacgtattaatagcagtggacactgca
ggcagagttttggaacttgctcaacttcttgatcagatctggagaactaaagatgcagga
ctgggtgtctactcactggcgctcctgaataatgtcagctataatgtagtggagttttct
aagtcccaggtagaatggatgagtgacaaattgatgagatgttttgaagacaaaagaaac
aatccatttcagtttcgtcatctctctttatgtcatggtctttctgacttggctcgagta
cctagccccaaagtagtactcgccagccagcctgacctggaatgtggattttcaagggat
ctcttcattcaatggtgtcaggaccctaaaaattcaatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaaattacagaaatagag
ttgaggaaacgtgtgaagcttgaaggaaaagaactagaagaatacttagaaaaagagaaa
ctaaagaaagaggcagcaaaaaaacttgagcagtcaaaagaggcagacatagattccagt
gatgagagtgatgttgaggaagacattgaccagccatcagctcataagatgaagcatgac
ctgatgatgaaaggtgaaggtagtcggaaaggaagtttcttcaaacaggctaaaaagtct
taccctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaagatttcttagttccagaactccaagcgactgaagaagagaaaagcaaatta
gaatctggcttgacaaatggagatgaacccatggatcaggacttatctgatgttcctacc
aagtgtatttctacaacagagtctattgaaataaaagccagagttacttacatagactat
gaaggacgctctgatggagattccattaaaaagatcattaatcagatgaaaccacgacag
ttaatcattgtccatggaccaccagaggccagtcaggatctcgcagagtgctgtcgtgca
tttggtgggaaagatattaaagtgtacatgccaaagctacatgaaacagtggatgccact
agtgaaactcatatctaccaggtgagattgaaagattcactcgtcagctcccttcagttt
tgtaaggcaaaagatgctgaattagcttggatagacggtgtcttggacatgagagtttcc
aaagtggacacaggagttattttagaagaaggagaactgaaggatgatggagaagactcc
gaaatgcaagtggacgctccttcggattccagcgttatagcacaacagaaggccatgaag
agtctgtttggggatgatgagaaagagacaggtgaagaaagcgagatcattccaaccttg
gaaccattgcctccccacgaggttcctggacatcagtcagtttttatgaacgaaccaaga
ctgtcagacttcaaacaagttcttttacgggaggggattcaagctgaatttgtaggaggt
gtgcttgtttgcaacaatcaagtagcggtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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