Canis lupus familiaris (dog): 480365
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Entry
480365 CDS
T01007
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
480365 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
480365 (VTI1B)
Membrane trafficking [BR:
cfa04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
480365 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
YqjK
Fusion_gly
OmpH
DUF6720
DUF5616
BORCS6
Motif
Other DBs
NCBI-GeneID:
480365
NCBI-ProteinID:
XP_537489
Ensembl:
ENSCAFG00000016442
VGNC:
48317
UniProt:
A0A8C0RLI9
A0A8I3MP68
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All DBs
Position
8:complement(41312675..41341742)
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AA seq
232 aa
AA seq
DB search
MATSAVSSEHFEKLHEIFRGLHEDLRGVPERLLGTAGTEEKKKLIRDFDEKQQEANETLA
EMEEELRYAPLSFRNPMMSKLRTYRKDLAKLHREVRSTPLTATPGGRGDMKYGSYAVENE
HMNRLQSQRALLLQGTDSLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQLERTKSR
LVNTSENLSKSRKILRSMSRKVTTNKLLLSIVILLELAILGGLVYYKFFHKH
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcggccgtctcctcggagcatttcgagaaacttcacgagatcttccgcggc
ctccatgaagacctgcgaggggtgccggagcggctcctggggacggcaggcacagaagag
aagaagaagctgatcagagattttgacgaaaagcaacaggaagcaaatgaaacgctggca
gagatggaagaggaactacgttatgcacctctatctttccgtaaccctatgatgtctaag
cttcgaacctaccggaaggatcttgccaaactccatcgggaagtgagaagcacacctttg
acagccacacctggaggccgaggagacatgaaatacggttcatatgctgtagaaaatgaa
catatgaaccggctgcaatctcaaagggcattgcttctgcaaggcactgatagcctgaac
cgggccacccagagtattgagcgttctcatcggattgccacagagactgaccagattggc
tcagaaatcatagaagagctgggggaacaacgtgaccagttggaacgtactaaaagtagg
ctggtaaacacaagtgaaaacttgagcaaaagtcgaaagattctccgttcaatgtccaga
aaagtaacaaccaacaagctgctactttccatcgtcatcttactggagctggccatccta
gggggcctggtttattacaaattctttcacaagcattga
DBGET
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