Canis lupus familiaris (dog): 480426
Help
Entry
480426 CDS
T01007
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
480426 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
480426 (DICER1)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
480426 (DICER1)
microRNA pathway
RISC loading complex
480426 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
480426
NCBI-ProteinID:
XP_022278061
Ensembl:
ENSCAFG00000017701
VGNC:
39958
LinkDB
All DBs
Position
8:complement(63546706..63619316)
Genome browser
AA seq
1923 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVNASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYGRLLVELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD
IEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV
GVRSLPVDFRYPNLDFGWKKSIDSKSFISVANSSSAENENYCKHSTIVVPENAARQGANR
TSSLENHDQMSVNCRTLFSESPGKLQIEVVTDLTAINGLSYNKNLANGSYDLANRDFCQG
NQLNYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANKSTSDGSPTTA
AMPGTTEAVRALKDKMGSEQSPCPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYVVNQDKSNADKWEKDEMTKDCMLANGKLDEDFEEDDEEEEDLMWRAPKEDADYE
DDFLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFE
DFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSI
ADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVMKRTDREKTMCPPRENFSSQQKNLSG
GRAAASVASLRPSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKN
KAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSAL
VNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKE
EDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLE
MEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQV
PNS
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcagcccctcagcatggcaggcctgcagctcatgacccctgcc
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataatacc
atagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagacttcaacagaaatggaaaaaggacggtgttcttggtc
aactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcattcagatctcaag
gttggggaatactcaaacctagaagtaaatgcatcttggacaaaagagaaatggaaccaa
gagtttactaagcaccaggttctcgttatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatctctgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
atcctagaccacccctaccgagaaattatgaagctctgtgaaaattgtccatcgtgtcct
cgtattttgggactcactgcttccattttaaatgggaaatgcgatcccgaggaattggaa
gaaaagattcagaaactggagaaaattctgaagagtaatgctgaaactgcaactgacctg
gtggtattggacagatacacttctcaaccctgtgagattgtggtggactgtgggccattc
acggacagaagtggcctctatggcagactgctggtggagctagaggaagcacttaacttt
atcaacgactgtaacatatctgtgcattcgaaagaaagagattctactctaatttctaaa
cagatactgtcagactgtcgtgcggtattggtagtcctgggcccctggtgtgcagataaa
gtagctgggatgatggtaagagaactgcaaaagtatatcaaacatgaacaggaagagctg
cacaggaaatttctattgtttacagacaccttcctaaggaaaatacatgcactatgtgaa
gagcacttctctcctgcctcacttgacctgaaatttgtaactcctaaagtaataaaactg
cttgaaatcctacgcaaatataaaccgtacgagcgacagcagtttgaaagtgtcgagtgg
tataataataggaatcaggataattatgtgtcttggagtgattctgaggatgatgatgag
gatgaagaaattgaagaaaaagagaagccagagaccaactttccttctccatttaccaat
attttatgtggaatcatttttgtggaaagaagatacacggctgttgtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataact
ggacatggcattggaaagaatcagcctcggaacaaacagatggaagcagaattcagaaaa
caggaagaggtacttaggaaatttcgagcacatgagaccaaccttctcattgcaacaagt
attgtggaagagggtgttgatataccaaaatgcaacttggtggttcgatttgatttgccc
acagagtatcgatcctatgttcaatctaagggaagagcaagggcaccgatctctaattat
ataatgttagcagatacagacaaaataaaaagttttgaagaagaccttaaaacatacaaa
gctattgaaaagatcttaagaaacaagtgttccaagtcagttgacactggtgagactgac
attgaacctgttgtggatgatgacgacgtgttcccaccatacgtgttgaggcctgatgat
ggtggtccacgagtcacaatcaacacggccattggacacatcaatagatactgtgctaga
ttaccaagtgatccgtttactcatctagctcctaaatgtagaacccgagagttgcctgat
ggtacattttattcaactctttatctgccaattaactcacctctccgagcctccattgtt
ggtccaccaatgagctgtgtacgattggccgaaagagtcgtagctctcatttgctgtgaa
aaactgcacaaaattggtgaactggatgaccatttgatgccagttgggaaagagaccgtt
aaatatgaagaagagcttgatttacatgatgaagaagagaccagtgttccaggaagacca
ggttccacaaaacgaagacagtgctacccaaaagcaattccagaatgtttaagggatagc
tatcccaaacctgatcagccctgttacctgtatgtgataggaatggttctgacgacgccc
ttacctgatgaactcaacttcagaaggcgcaagctctatccccctgaggataccacacga
tgctttggaatactaacagccaaacctatacctcagatcccgcactttcctgtgtacacg
cgctctggagaggttaccatatccattgagttgaagaagtctggtttcacattgtctcta
caaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcggctt
gaaaaacctgcactagaatttaaacccacagacgctgattcagcatactgtgttctacct
cttaatgttgtgaatgactccagcactttggacattgactttaaattcatggaagatatt
gagaaatctgaagctcgcataggcattcccagtaccaagtattcaaaagaaacacctttt
gtttttaaattagaagattaccaggatgcagttatcattccaagatatcgtaattttgat
cagcctcatcgattctatgtagctgatgtatacactgatcttaccccactgagtaaattt
ccttcccctgagtatgaaacttttgcagaatattataaaacaaaatacaaccttgacctg
accaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg
acacctcgtcatttgaatcagaaggggaaagcgcttcctcttagcagtgctgaaaagaga
aaagccaagtgggaaagtctgcagaataaacagatactggttccagagctctgtgctata
cacccaattccagcgtcactgtggcgaaaagcagtctgtctccctagtatactctatcgc
cttcactgccttttgaccgcagaggagctaagagcccagacggccagcgatgctggcgtg
ggagtccgatcacttcccgtggattttagataccctaacctagactttgggtggaaaaaa
tctattgacagcaaatctttcatctcagttgctaactcctcttcagctgaaaatgaaaat
tactgtaagcacagcacaattgtcgtccctgaaaatgctgcacgtcaaggtgctaataga
acctcctctctagaaaatcatgaccaaatgtctgtgaactgcagaacgttattcagtgag
tcacctggtaagctccagattgaagttgtaacagatcttacagcaattaatggtctttct
tataataaaaatcttgccaatggcagttatgatttagctaacagagacttttgccaagga
aatcagctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccatt
cagaatttatacaattacgagaaccagcccaagcccagcgatgaatgtactctactgagt
aataaataccttgatggaaatgctaacaaatctacctcagatggaagtcccacgacggcc
gcaatgcctggtactaccgaagctgttcgagcgctcaaggacaagatgggttctgagcag
agcccttgtcctgggtactcctcgaggactcttggcccaaatcctggacttattctgcag
gctttgaccctttcaaatgctagtgatggatttaacctggagcggcttgaaatgcttggt
gactcctttttaaagcatgccatcaccacatatctattttgcacttatcctgatgctcat
gagggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaatctgtatcggctt
ggaaaaaagaagggactgcccagccgcatggtggtatcaatatttgatccccctgtgaat
tggcttcctcctggttatgtagtaaaccaagacaaaagtaacgcagataaatgggaaaaa
gatgaaatgacaaaagactgcatgttggctaatggcaagctggacgaggactttgaggag
gacgacgaggaggaggaggatctaatgtggagggctccgaaggaggacgccgattatgaa
gatgatttcctggagtatgatcaggaacatatcaaatttatagataacatgttaatggga
tcaggagcttttgtaaagaaaatttctctctctcctttttcaaccactgattctgcatac
gaatggaaaatgcccaaaaaatcctccttaggtagtatgccattttcatcagattttgag
gattttgactatagctcttgggatgccatgtgctatctggatcctagcaaagctgtggaa
gaggatgactttgtggtggggttctggaatccatcagaagaaaactgtggtgttgacacg
gggaaacagtccatttcttacgacttgcacactgagcagtgtattgcggacaaaagcata
gccgactgcgtggaagccctgctgggctgctatttaaccagctgcggcgagagggctgct
cagctcttcctctgctcactggggctcaaggtgctcccggtcatgaaaaggaccgatcgg
gaaaagaccatgtgccctcctagggagaatttcagcagccaacaaaagaacctttcaggg
ggccgcgctgctgcctctgtggccagtttacgtccctctgtgttgaaagacttggagtat
ggctgtttgaagattccaccgaggtgtatgtttgatcatccggacgcagataaaacactg
aatcaccttatatcgggttttgagaattttgaaaagaaaatcaactacagattcaagaat
aaggcttatcttctacaggcttttacccatgcctcctaccactacaatactattactgat
tgttaccagcgcctggagttcctgggagatgcgatcttggactacctcataaccaagcac
ctttacgaagacccgcggcagcactccccgggcgtcctgaccgacctgcggtccgcactg
gtcaacaacaccatcttcgcgtcgctggcggtcaagtacgactaccacaagtacttcaaa
gctgtctcccctgagctcttccatgtcattgatgacttcgtgcagttccagctggagaag
aatgagatgcagggcatggactccgagcttaggaggtctgaggaggatgaagagaaagaa
gaggacattgaagttccaaaggccatgggggacatttttgagtcgcttgctggtgccatt
tacatggatagtgggatgtcactggagatggtttggcaggtgtactatcctatgatgcgg
ccgctgatagaaaaattttctgcaaacgtgccccgttcccctgtgcgagaattgcttgaa
atggaaccagaaactgccaaatttagcccggctgagaggacgtatgacggcaaggtcaga
gtcacggtggaagtggtagggaaggggaaatttaaaggcgtcggccggagctacaggatc
gccaagtctgcagcagcaagaagagccctacgcagcctcaaagccaatcaacctcaggtt
cccaacagctga
DBGET
integrated database retrieval system