Canis lupus familiaris (dog): 480507
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Entry
480507 CDS
T01007
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
480507 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
480507 (DHX8)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
480507 (DHX8)
Spliceosome [BR:
cfa03041
]
Complex C
Other components
Step II factors
480507 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
OB_RRP5_4th
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
480507
NCBI-ProteinID:
XP_537627
Ensembl:
ENSCAFG00000014556
VGNC:
39952
UniProt:
A0A8C0LYS1
LinkDB
All DBs
Position
9:complement(19122727..19155072)
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AA seq
1216 aa
AA seq
DB search
MAVAVAVAGAVTGTELGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTGKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDKAKKKKRSRSR
DRDRERERDRDREHKRRHRSRSRSRSRTRERNKGKSRYRSRSRSQSPPKDRKDRDKYGER
NLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREG
RVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSM
RNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETG
ILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAK
ERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFG
GNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAE
AGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDG
MLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVK
FSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQE
EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAET
SLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYT
ERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL
GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDK
QALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLG
IMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR
QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNR
YEEPNAWRISRAFRRR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtggccgtggcgggagccgtaaccggcacagagctgggtcccgcggaa
gaactcgccaaacttgagtatctgtctttagtgtcgaaagtttgcaccgagctggacaat
cacctggggatcaacgacaaggatctggctgaattcgtgatcagtctggctgagaaaaat
accacctttgatacttttaaggcttctctggtcaaaaatggtgctgaattcacggattct
cttattagtaacttgctgcgcctcatacaaaccatgcggcctccagcaaagccttctact
agcaaagatccagttgttaaacccaaaaccggaaaagaaaagctaaaggaactcttcccg
gtcctttgccaaccagacaacccttctgtccggaccatgctggatgaagatgatgtgaaa
gttgctgtggatgtcctgaaagaactggaggccttaatgcccagtgcagcgggccaggag
aagcaaagagatgctgagcaccgggacaaggcaaagaagaagaagcggagccgaagccgc
gaccgtgaccgagagcgggagcgagaccgtgatagagaacacaagaggagacaccggtcc
cgctctcggtcgcgttccaggacccgggaaaggaataaagggaagtcgaggtatcggtcc
aggagcagaagtcagagtccccccaaagacaggaaggaccgggacaagtatggggagagg
aacctggacagatggcgggataagcatgtggaccgtcctcccccagaagagcctgccatc
ggggacatttacaatggcaaagttaccagcataatgcagtttggatgctttgtgcagctg
gagggattaaggaagcggtgggaaggcctggtgcacatctctgagctccgacgagaaggt
cgtgtggccaatgtcgctgatgtggtaagcaaaggccagagggtgaaggtcaaagtactg
tctttcactgggaccaagaccagtctgagcatgaaggatgtggatcaagaaactggagaa
gatctaaatcccaaccgacgacgaaatcttgttggggagaccaatgaggagacttcaatg
aggaatcctgatagacccactcacctctccctcgtcagtgcccctgaagtagaagatgat
tcactggagcgcaagcgccttacccgcatttctgacccagagaagtgggagatcaaacag
atgattgctgccaatgtcctttccaaagaagagtttccagactttgatgaagagactggc
attctccctaaagtggatgatgaagaagatgaagatcttgagatcgaactggttgaagaa
gagcctccattcctaagagggcacaccaagcaaagcatggacatgagccctattaaaatt
gttaagaacccggatggttccctctcccaagcagcaatgatgcagagtgccttagccaaa
gaaaggcgggaactcaagcaggcccagcgggaagctgagatggattctattcccatgggg
ctcaacaaacactgggttgatcctctgcctgatgcggaaggcaggcagattgctgccaat
atgagaggtattgggatgatgcccaatgacattcccgagtggaagaagcatgcctttggg
ggcaacaaagcttcttatgggaaaaagacccagatgtcaatcattgagcagagagagagc
ctgcccatctacaaactgaaggagcagctggtccaggctgtccatgacaatcaaatcctg
attgttattggagagacaggatctgggaagacaacgcagatcacccagtacctggcagag
gcaggctatacttcccggggcaagattggatgtacccagcccagaagagtagcagccatg
tcagtggccaaaagagtgtcggaggagtttggatgttgcctgggccaagaggtgggctac
accattcgatttgaggactgtaccagcccagagaccgtgatcaagtacatgacagatggg
atgttgctccgcgagtgcctgattgaccccgacctcacacagtatgcgatcatcatgtta
gatgaggctcatgagagaaccattcacactgatgtgctgtttggattgttgaagaagacg
gttcagaaacggcaagacatgaagctaattgtcacctcagccacattggatgcagtgaag
ttttctcagtacttctatgaagcccccatcttcaccattccaggtcgaacatacccagtg
gaaatactatacacgaaggaacctgagacagattatctggatgccagcttgatcactgtc
atgcagatccacctaacagaaccaccaggtgatatcctggtcttcctcactggtcaggag
gagattgatactgcttgtgagatcctatatgaaagaatgaaatccctgggaccggatgtt
ccagagctgatcatcctgccagtgtactctgctcttcccagtgagatgcagacccgaatc
tttgacccagctccacctggcagcagaaaggtcgtgattgccaccaacatcgcagagacc
tcgctgactattgacggcatctactatgtggtggaccctgggtttgtgaaacagaaagtt
tacaattccaagactggcattgaccagcttgtggtcactccgatttctcaggctcaggca
aagcaacgagctggcagagctgggcggacgggcccagggaagtgttacaggctgtacact
gaacgtgcctaccgagatgaaatgctgaccaccaatgtgccggaaatccagaggaccaac
ctggcgagcacggtgctctcgctcaaggccatgggcatcaatgacctgctgtcctttgac
ttcatggatgccccaccaatggaaaccttgatcacagccatggagcagctctatacgctg
ggggccttggacgatgagggcctgctcactcgtctgggccgcaggatggcagaatttccc
ctggagccaatgctgtgcaagatgctgatcatgtccgtgcacctgggctgcagtgaggag
atgctgaccatcgtgtccatgctgtcagtgcagaatgtcttctataggcccaaggataaa
caagccctcgcagatcagaagaaagccaaattccaccagaccgaaggggaccacctcacc
ctgctggccgtgtacaactcctggaagaacaacaaattctccaacccatggtgctatgag
aacttcatccaggcgcgctccctgcgccgggcccaggatattcgcaagcagatgttaggc
ataatggacagacacaagctggatgtggtctcctgtggcaagtccacagtgcgagtgcag
aaggccatctgcagtggattcttccgaaacgctgccaagaaagacccacaggagggctac
cggacactgatcgaccagcaggtggtctacattcacccttccagtgctcttttcaacaga
cagcccgaatgggtagtgtaccatgagctggtgctgacgacgaaggagtacatgcgtgag
gtcaccactattgaccccaggtggcttgtggagtttgctccagccttcttcaaggtctcc
gacccgaccaagctaagcaagcagaagaagcaacagcgtctagaacccttgtacaaccgg
tacgaggagcccaacgcttggagaatatcccgggccttccgacggcgctga
DBGET
integrated database retrieval system
