Canis lupus familiaris (dog): 480627
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Entry
480627 CDS
T01007
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfa03021
]
480627 (SUPT6H)
03036 Chromosome and associated proteins [BR:
cfa03036
]
480627 (SUPT6H)
Transcription machinery [BR:
cfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
480627 (SUPT6H)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
480627 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
480627
NCBI-ProteinID:
XP_013972259
Ensembl:
ENSCAFG00000018763
VGNC:
49096
UniProt:
A0A8C0N502
LinkDB
All DBs
Position
9:42015365..42052125
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSVGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcagaggaagagtacaatgatgaaggc
gaagtggtgccccgagtcaccaagaaatttgtggaagaggaggatgacgatgaggaggag
gaggaagagaacctagatgatcaggatgagcaaggcaatctgaaaggctttatcaatgat
gatgatgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgatgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgacgaggatgacgacgaggaggaatatggcaaagaggaacat
gaaaaagaggctattgcagaggaaatcttccaggatggggaaggggaagaagggcaggaa
gctgtggaggcccccatggctcctccagaggaggaggaggaagatgatgaagaatcagac
atcgatgactttattgtggatgatgacggacagcccctgaaaaaacctaagtggcggaaa
aagctacctggatacacagatgcggccctgcaggaagcccaggagatttttggtgtggac
tttgactatgacgagtttgagaaatacaatgagtatgatgaagaactggaggaagagtat
gagtatgaggatgatgaggctgaaggtgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatctttgagatgtatgagcccagcgagctggaaagcagc
cacctcacagatcaagacaatgaaatccgagccactgacctgcctgagagattccagctc
cgctccattccagtcaagggggctgaagatgatgaactagaagaggaagctgactggatc
tacaggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagat
cgagggcagccaaccagcagcttcagtcgaaaagggcccagcacaattcagaagattaaa
gaagccctgggcttcatgcgaaatcaacactttgaggtgccttttattgctttctaccgt
aaggagtatgtggagcctgagttgcacatcaatgacctgtggagggtgtggcaatgggat
gaaaagtggacccaactgaggattcgcaaagagaacctaacacggctatttgaaaagatg
caggcctaccagtatgagcagatctccgctgaccctgataaacctcttgctgatggcatc
cgggctctggataccactgacatggagaggctgaaggatgtacagtcaatggatgagctg
aaagatgtctacaaccatttcttgctttattatggtcgtgatatccccaagatgcagaat
gccgccaaggccagccgcaagaagctgaagcgtgtacgggaagagggagatgaggaaggt
gagggtgaagaggcagaagatgaggagcagaggggcccagagctcaagcaggcctcccgc
cgagacatgtacaccatctgccagagtgctgggctagatggtctggccaaaaagtttggg
cttactccggagcagtttggggaaaatctccgggatagctaccagcggcacgagacagag
cagttccctgctgagcctttggagctggccaaggattatgtctgcagccaattcccgaca
ccagaagctgtgctggaaggtgctcgctacatggtagccctgcagattgcccgagagccc
cttgtccgacaggtgctgaggcaaaccttccaggagagagccaagctaaatataaccccc
accaagaaaggcagaaaggatgtcgatgaagcccactacgcttattctttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatctgcttggctgaa
gacgaagggctgctcaccattgacatcagcatagacatgaagggggtagaaggctatggc
aatgaccagacctattttgaagagatcaaacagttttattaccgagatgagttcagccac
caggtgcaggaatggaaccgacagcgcaccatggctattgaacgagctttgcagcagttc
ctctacgtgcagatggccaaggaactcaaaaataagctgctggccgaagccaaagaatac
gtcataaaggcatgtagtcgaaaactctacaactggttgagggtggcaccataccggcca
gatcaacaggtagaggaagacgatgactttatggatgagaaccaagggaagggcatccga
gtcctaggcattgctttctcctctgccagagatcatcctgtattctgtgccctggtcaat
ggcgaaggagaagtgacagacttccttcggctgccacattttaccaaacggcgaactgcg
tggagagaggaggaaagggaaaagaaggctcaagacattgaaaccctaaagaaatttctc
ctgaacaaaaagcctcatgtggtgacagtcgcaggagaaaacagggacgcccagatgttg
attgaagatgtgaagcgcattgtgcatgagctggaccagggccaacagctgtcctctgtt
ggggtggagctggttgataatgagttggccattctctatatgaacagcaagaaatcggag
gcagagttccgggattatcctccagtgctgagacaggccgtctccctggcccggcgcatc
caggaccctctgattgaatttgcccaggtgtgcagctctgatgaagatattctgtgtctc
aagtttcatcccttgcaggagcatgtggtaaaagaggagctgctcaacgccttgtactgt
gaatttatcaaccgagtcaatgaagttggggtcgatgtcaaccgtgccatcgctcacccg
tacagccaggccttaatccagtatgtctgtggcctgggacctcgaaaagggacccatctc
ctaaagatcctgaagcagaacaacaccaggctcgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgtgctggcttcctcaagattgacacagcc
tccttgggggacagcactgactcatacattgaggttcttgatggttcccgagtccaccct
gagacctatgagtgggccaggaagatggcagtggatgctctggaatatgatgaatcagct
gaggatgccaaccctgcaggagctcttgaagaaatcttggaaaacccagagcgactcaag
gacctggaccttgatgcctttgcagaagaactggagaggcagggctatggtgataaacac
atcaccctgtacgacatccgagcggagctgagctgtcggtataaggatctccggacagcc
taccgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacgccagagacc
ttctacattggaaagctcattatctgcaacgtcactggcattgcccacaggcgtccccag
ggtgagagctatgaccaggcaatccgcaacgatgagacagggctatggcagtgccccttc
tgtcagcaagacaatttcccggagctaagtgaggtctggaaccactttgacagcggttca
tgcccaggccaggccattggtgtcaaaacacggctagacaatggtgtcaccggcttcatc
cccaccaagttcctcagtgacaaagtggtaaagcggccggaggagcgagtgaaggtggga
atgaccgttcactgccgcatcatgaagattgacattgagaagtttagtgccgatctcacc
tgccgaacctcagacctcatggacaggaacaatgagtggaaactgcccaaggacacctac
tatgactttgatgccgaagcagcggaccacaagcaggaggaggacatgaaacggaagcag
cagcggaccacatacatcaagcgagtgatcgcacacccgtccttccataatataaacttc
aagcaagcagaaaagatgatggagaccatggaccagggtgacgtgatcatccgcccaagc
agtaagggtgaaaatcacctgactgtgacctggaaggtcagcgatggcatctaccaacat
gtggatgtacgggaagagggcaaagaaaatgccttcagcctgggggccacactgtggatc
aacagcgaggaatttgaagacttggatgagattgttgctcgctacgtccagcccatggca
tcctttgcccgggaccttctgaaccacaaatattatcaggactgcagtggtggtgaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactccagaaggattccggtaccggggccaaatc
ttccctactgtgaatggacttttcagatggtttaaggatcactaccaggatcctgtacca
ggcatcactcctagtagcagcagcaggacacggacacctgcttctatcaatgccacacca
gccaacatcaaccttgcagatctgacacgggctgtgaatgccctgccccagaacatgacc
tcgcagatgttcagtgccattgcagctgtgacaggtcaaggacagaaccctaatgccacc
ccagcccagtgggcctccagccagtatggctatggcggcagtggaggaggcagcagcgct
taccacgtgttcccaacgccagcccagcagccagtggccacaccactaatgacccccagc
tactcctacacaacccccagccagcccatcaccacaccacagtaccaccaactacaggcc
agcaccaccccacagtctgcccaggcccagccccagccctcctccagctctcggcaacgg
cagcagcagccaaagtccaacagccacgcggccatcgactgggggaagatggcagagcag
tggctacaggagaaggaagcagagcggcggaaacagaagcagcggctgacacctcggccc
tctcccagccccatgatcgaaagcacccccatgtccattgctggcgatgccaccccactc
ctggatgagatggatcggtag
DBGET
integrated database retrieval system
