Canis lupus familiaris (dog): 480651
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Entry
480651 CDS
T01007
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X2
KO
K12856
pre-mRNA-processing factor 8
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
480651 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
480651 (PRPF8)
Spliceosome [BR:
cfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
480651 (PRPF8)
Complex C
U5 SnRNP specific factors
480651 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
480651
NCBI-ProteinID:
XP_038468737
Ensembl:
ENSCAFG00000019221
VGNC:
45030
UniProt:
A0A8C0PUW1
A0A8I3NXH8
LinkDB
All DBs
Position
9:complement(44948795..44978151)
Genome browser
AA seq
2290 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQGPVGKGPGCGFWAAGWRVWLFFMRGIT
PLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNK
ARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGA
TVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPI
PFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHL
LTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADT
EPPPLLVYKWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNI
ADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPP
QMPNDFLSFQDIATEAAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENI
VGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNL
LFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVR
QILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNS
KMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLI
PNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQK
DRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGIL
EHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRA
NVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALE
IETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQ
LRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPL
IQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNV
YRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEV
AALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDL
ILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPH
HIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQ
IAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHL
RTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCI
VMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPS
WDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSD
RFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEV
YSADREDLYA
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtatttccttaccgagggccgggtaacccggtgcccggccctctagcccca
ttgccggactacatgtcggaggagaagctgcaagagaaagcccgaaaatggcagcaatta
caggccaagcgctatgcagaaaagcgaaagtttggatttgtggatgctcagaaagaagac
atgcccccagaacacgttaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtttacttgggtgccctgaaatacatgccccatgcagtcctc
aaactgctggagaacatgcctatgccttgggagcagattcgggatgtacctgtgctgtac
cacatcactggagccatttcttttgtcaatgagattccctgggtcattgagcctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacagaaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgctgac
aatatcttggatgttgaaccactggaggccattcagctagagctggaccctgaagaggat
gctcctgtgttggactggttttatgaccaccagccattgagggatagtcggaagtacgtg
aatggttccacttaccagcgctggcagttcacactgcccatgatgtccactctataccgc
ttggccaatcagctcctgacagacttggtagatgataactacttctatctctttgatctg
aaagccttcttcacgtccaaggcactcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaacctccaggatgaagactggaatgaattcaacgatattaac
aagatcatcatccggcagcctatccgcactgaatacaagattgcttttccctatctgtac
aacaaccttccacaccatgtccaccttacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatctcccagctttctactttgatcctttgatcaacccaatttct
cacaggcactctgtcaagagccaggaaccattacctgatgatgacgaggagtttgaactc
ccagagtttgtggagcccttcctgaaggacacacccctttacacagacaatacagccaat
ggcattgccctgctctgggccccaaggcccttcaacctacgctctggtcgtacccgccgg
gccctggacatcccccttgtcaagaactggtatcgggagcattgtcctgctgggcaacct
gtgaaagtgagggtctcctaccagaaacttcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcccaaaagaagaggtacctgtttcgttccttcaaagctaccaaa
ttctttcagtccacaaagctggactgggtagaggtggggcttcaggtttgccgccagggc
tacaacatgctcaaccttcttattcaccgaaaaaacctcaactatctgcatctggattat
aacttcaatcttaagcctgtcaagaccctcactaccaaggaaagaaagaaatctcgtttt
ggaaatgctttccatctgtgtcgagaagttctgcgtttaaccaagttggtggtggacagt
catgtgcagtatcgcttgggcaatgtggatgccttccagggccctgtaggaaagggccct
ggctgtggcttctgggctgctggctggcgagtctggctgtttttcatgcgtggcatcacc
cctttgctggagcggtggctgggcaacctcctggcccgacagtttgaaggccgacactcc
aagggggtggcaaagactgtaacaaagcagcgagtggaatcgcattttgacctggagctt
cgggcagctgtgatgcatgacattctggacatgatgcctgagggaatcaaacagaacaag
gcccggacgatcctgcagcacctcagtgaagcctggcgctgctggaaggccaatattccc
tggaaggtacctgggctgccaacacccatagagaatatgatccttcgatatgtgaaggcc
aaggctgattggtggaccaacactgcccactataaccgagaacgaatccgccgtggagcc
actgtggacaagactgtttgcaaaaagaacctggggcgcctcactcggctctatctcaag
gcagaacaggagcgacagcacaactacctgaaggatgggccatacatcacagcagaggaa
gcggtggcagtgtataccaccactgtgcattggttggagagccggaggttttcacccatc
ccatttcccccactctcctacaagcatgacaccaaattgctcatcttggccttggagcgg
ctcaaggaagcttacagtgtgaagtctcggttaaaccagtctcagagggaagagctaggt
ctgatcgagcaagcctatgacaatccccatgaggcactgtcacgcatcaagcgtcacctc
ctcacacagagagcctttaaagaagtgggcattgagttcatggatctttatagccacctg
gtgccagtatatgatgtagagccactggagaagatcactgatgcctacctggaccagtac
ctttggtatgaagctgacaagcgccgccttttcccaccctggatcaagcctgccgacaca
gaaccacctcctctgcttgtttacaagtggtgccaaggcatcaataatctgcaagatgtg
tgggagacaagtgagggcgagtgcaatgtcatgctggaatcacgctttgagaagatgtat
gaaaagattgacttgaccctgcttaataggctgctgcgactcattgtagaccacaacata
gctgactacatgacagccaagaacaatgtcgtcatcaactataaggacatgaaccataca
aattcctacgggatcattagaggcctgcaatttgcctcattcattgtgcagtactatggt
ttggtgatggatttgctggtgttgggactgcaccgggccagtgagatggctgggccccct
cagatgccaaatgactttctcagtttccaggacatagccactgaggctgcccaccccatc
cgtctcttctgcagatacatcgatcgcatccatatttttttcaggttcacagcagatgag
gctcgggacttgatccagcgttacctgacagagcatcctgacccgaacaatgaaaatatc
gttggctataataacaagaagtgctggccccgagatgcgcgcatgcgcctcatgaaacat
gatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgtctgccacggtcagtg
actacagttcagtgggagaacagtttcgtgtctgtgtacagtaaggataaccccaacctg
ctgttcaacatgtgtggctttgagtgccgcatcctacctaaatgccgcaccagctatgag
gaattcacccacaaggatggggtgtggaacctgcagaatgaggttactaaagagcggaca
gctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttccacaaccgtgtgcgt
caaattctgatggcctctggctctactaccttcaccaagattgtgaataagtggaacaca
gctcttataggccttatgacgtactttcgagaggctgtggtgaacacccaggagctcctg
gacttgctagtgaagtgtgagaacaagatccagacacgtatcaagattggcctcaactcc
aagatgcccagtcggttccctcccgttgtgttctatacccctaaggaattgggtggactt
ggcatgctctcaatgggacatgtgctcattccccagtctgacctcaggtggtccaagcag
acagatgtaggtatcacacactttcgttcaggaatgagccatgaagaagaccagctgatt
cccaacttgtaccgctacatacagccatgggagagcgagttcattgattctcagcgagtg
tgggctgagtatgcactgaagagacaagaggccattgctcagaacagacgactgacctta
gaagatctagaagattcatgggatcgtggcattcctcgaatcaacaccctcttccagaag
gaccggcacacattggcttatgataagggctggcgtgttcgaactgactttaagcagtat
caggttttgaagcagaaccctttctggtggacacaccagcggcatgatgggaagctctgg
aacctgaacaactaccgtacggacatgatccaggccctgggtggtgtagaaggcattcta
gaacacacactcttcaagggcacttacttccctacctgggaggggcttttctgggaaaag
gccagtggttttgaggagtctatgaagtggaagaagctaactaatgctcagcgatcagga
ttgaaccagattcctaatcgtaggttcaccctctggtggtccccaaccatcaaccgggcc
aatgtgtatgtaggctttcaggtgcagctggacctgacaggtatcttcatgcatggcaag
attcccacactgaagatctctcttatccagatcttccgagctcacttatggcagaagatc
cacgagagcattgtgatggacttgtgtcaggtgtttgatcaggaactggatgcactagaa
attgagacagtacaaaaggagaccattcaccctcggaagtcctataagatgaattcttcc
tgtgcagatatcctgctctttgcctcctataagtggaatgtctcccggccctcgttgctg
gcagactccaaggatgtgatggatagtaccactactcagaagtattggattgatatccag
ttgcgctggggggactatgattcccatgacattgaacgctatgcccgggccaagttcttg
gactacaccacagacaacatgagtatctacccttcacccactggtgtgctcattgccatt
gacctggcctataacctgcacagtgcctatggaaactggttcccgggcagcaagcctctc
atacagcaggccatggccaaaatcatgaaggcaaaccctgccttgtatgtgttacgtgaa
cggatccgcaaggggctgcagctctattcatctgagcccactgagccctatctgtcctct
cagaattatggggagctcttctccaaccagattatctggtttgtggatgatactaatgtc
tacagagtgactatccataagacctttgaagggaacttgacgaccaaacccatcaatggg
gccatcttcatcttcaatccacgcacagggcagctgttcctcaagataatccacacatcc
gtgtgggctggacagaagcgtttggggcagctggctaagtggaagacagctgaggaagtg
gctgccctgatccgatctctgcctgtagaggagcagcccaagcagatcattgttactagg
aagggcatgctggacccattggaggtgcacttgctggacttccccaatattgtgatcaaa
ggatcagagctccaactacctttccaggcttgtctcaaggtggaaaagtttggagacctc
atccttaaagccactgaaccccagatggttctctttaatctctatgatgactggctcaag
actatctcatcttacacggctttctcccgtctcatcctgattttgcgtgctcttcatgtt
aacaatgaccgagcaaaggtgatcctgaagccagacaagactaccattacagaaccacac
cacatctggcccactctgactgacgaggagtggatcaaggtggaggtgcagctcaaagat
cttatcttggccgactatggcaagaaaaacaacgtcaatgtggcatcactgacacagtca
gaaattcgagacatcatcttgggtatggagatctcggcaccatcacagcagcggcagcag
atagcagagattgagaagcagaccaaggaacagtcacagctgacagcaacgcagactcgc
actgtcaacaagcatggcgatgagatcattacttctaccaccagcaactatgagacccag
actttctcgtctaagactgaatggagggttagggccatctctgctgccaaccttcaccta
aggaccaatcatatctacgtgtcctctgatgacatcaaggagaccggttatacctatatc
cttcctaagaatgtgcttaagaagtttatttgcatatctgaccttcgggcccaaattgca
ggatacctgtatggagtgagtccaccagataacccccaggtgaaggagatccgctgcatt
gtgatggtaccacagtggggcactcaccaaaccgtgcacctgcctggccagctgccccag
cacgagtacctcaaggagatggaacccttaggatggatccacactcagcccaacgagtcc
ccccagctatcaccccaagatgtcaccactcatgctaagatcatggctgataacccatcc
tgggatggtgagaagaccattatcatcacctgcagcttcacaccaggctcctgcacattg
acagcctataagctgacccccagtggctatgaatggggtcgccagaacacagataagggc
aacaatcccaagggctatctaccctcacattacgagagggtccagatgctgctgtcagat
cgcttccttggcttttttatggtccctgcccagtcctcatggaactacaattttatgggt
gtccggcatgatcccaacatgaagtatgagctgcagctggcaaatcctaaagagttctac
cacgaggtgcacagaccttcccacttcctcaacttcgctctcttgcaagagggtgaggtc
tactctgcggaccgagaagacctctatgcctag
DBGET
integrated database retrieval system
