Canis lupus familiaris (dog): 480660
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Entry
480660 CDS
T01007
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04010
MAPK signaling pathway
cfa04020
Calcium signaling pathway
cfa04721
Synaptic vesicle cycle
cfa04723
Retrograde endocannabinoid signaling
cfa04725
Cholinergic synapse
cfa04726
Serotonergic synapse
cfa04727
GABAergic synapse
cfa04728
Dopaminergic synapse
cfa04930
Type II diabetes mellitus
cfa05016
Huntington disease
cfa05020
Prion disease
cfa05022
Pathways of neurodegeneration - multiple diseases
cfa05032
Morphine addiction
cfa05033
Nicotine addiction
cfa05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
480660 (CACNA1B)
04020 Calcium signaling pathway
480660 (CACNA1B)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
480660 (CACNA1B)
04725 Cholinergic synapse
480660 (CACNA1B)
04728 Dopaminergic synapse
480660 (CACNA1B)
04726 Serotonergic synapse
480660 (CACNA1B)
04723 Retrograde endocannabinoid signaling
480660 (CACNA1B)
04721 Synaptic vesicle cycle
480660 (CACNA1B)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
480660 (CACNA1B)
09164 Neurodegenerative disease
05016 Huntington disease
480660 (CACNA1B)
05020 Prion disease
480660 (CACNA1B)
05022 Pathways of neurodegeneration - multiple diseases
480660 (CACNA1B)
09165 Substance dependence
05032 Morphine addiction
480660 (CACNA1B)
05033 Nicotine addiction
480660 (CACNA1B)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
480660 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cfa04040
]
480660 (CACNA1B)
Ion channels [BR:
cfa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
480660 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
480660
NCBI-ProteinID:
XP_038469429
Ensembl:
ENSCAFG00000019380
VGNC:
38632
LinkDB
All DBs
Position
9:complement(47000692..47196388)
Genome browser
AA seq
2347 aa
AA seq
DB search
MVRFGDELGSRYGGAGGERARGGGAGGAGGPGPGGLQPGQRVLYKQSIAQRARTMALYNP
IPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDG
DKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILAT
AGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIG
LEFYMGKFHKACFSNSTDPDPVGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNIL
FAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAK
ERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAT
KKSRNDLIHAEEGEDRFPDLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVKA
QSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSY
FRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWSSLRNLVVS
LLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFRDETPTTNFDTFPAAILTVFQILT
GEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKD
EEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAAPQNSAKARSVWEQRASQLRLQNLR
ASCEALYSEMDPDERLRYATTRHLRPDMKTHLDRPLVVELGRDGPRVPAGGKARPEGAEA
AEGADPPRRHHRHRDKAPAPAPAPAPAPAPAPAPAPAAAGEQDRADGPKAEAGEPGAREE
RPRPHGSRSKEARSERGRGPGPEGGRRHHRRGSPEEAAEREPRRHRAHRHAPEPGKEGGA
AGAKGERRARHRGGPRAGPREAGSGEEPARRHRARHKALPTHEDAEKEAAEKEGEAEDRD
KEKELRNHQPKEPHGDLEASGTMGVGPVHALPSTCLQKVEEQPEDADNQRNVTRMGSQPS
DLSATVHIPVTLTGPPGDTAAVPSGNVDLESQAEGKKEVEADDVMRSGPRPIVPYSSMFC
LSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSPRNNALKYMDYIFTG
VFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDISTIK
SLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILVVYMLFMFIFAVIAVQLFKGKF
FYCTDESKGLERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWP
MVLKHSVDATYEEQGPSPGYRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMS
ECSLEKNERACIDFAISAKPLTRYMPQDKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVL
MMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSIT
DILVTEIANNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLF
FIYAIIGMQVFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNQAC
DEHANASECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFI
RVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVH
FTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMT
VGKVYAALMIFDFYKQNKTTRDQIHQAAGGLSQMGPVSLFHPLKATLEQTQPAVLRGARV
FLRQKSSASLSNGGAIQTQESGIKESVSWGTQRTQEVPCEARTPLERGHSTEIPVVQPGK
PAVDVQMQSMALRGPDGEPQPGLESQGRAASMPRLAAETQPAPDASPMKRSISTLAPQRP
HVAHLCNAALDRAPASQAVPHHHHRCHRRRDRKQKSLEKGASLSADTDGAPSSAAGPGPP
LGEGPAGCRRERRQERGRSQERRQPSSSSSEKQRFYSCDRFGGREPSQPKPSLSSHPTSP
TAGQEPGPPRPGGGSVNGSPLLSTSGASTPGRSGRRQLPQTPLTPRPSVTYKTANSSPVH
FVGAQTSLPTFSPGRLSRGLSEHNALLQRDPLSQPLAASSRIGSDPYLGQRLDSEDTACT
QPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSSGGRVRHSYHH
PDQDHWC
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcttcggggacgagctgggcagccgctatgggggcgccggcggggagcgggct
cggggcggcggggccggcggggcgggcggcccgggccccggggggctgcagccgggccag
cgggtgctctacaagcagtcgatcgcgcagcgcgcgcggaccatggcgctgtacaacccc
atcccggtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgaggac
aacgtcgttcgcaaatacgccaagcgcatcaccgagtggcctccgtttgagtacatgatc
ctggccactatcatcgccaactgtatcgtgctggcactggagcagcaccttcccgacggg
gacaagacgcccatgtctgagcggctggacgacacagagccctattttattggcatcttc
tgctttgaggcggggatcaagatcatagctctgggctttgtcttccacaagggctcctac
ctgcggaacggctggaacgtcatggactttgtggtggttctcacagggatcctggccacg
gctggcactgactttgacctgcggaccctgcgggctgtgcgcgtgctcaggcccctgaag
ctggtgtctgggattccaagtttgcaggtggtgctcaagtctatcatgaaggccatggtt
ccactcctgcagatcgggctgcttctcttcttcgccatcctcatgttcgcgatcattggc
cttgagttctacatgggcaaattccacaaggcctgtttctccaacagcacagatccagat
ccagtgggggacttcccctgtggcaaggaggccccggcccggctgtgtgagggtgacact
gaatgtcgggagtactggccagggcccaactttggcatcaccaactttgacaatatcctg
tttgccatcttgacagtattccagtgcatcaccatggagggctggactgacatcctctac
aatacaaatgatgcagctggcaacacttggaactggctctacttcatccctctcatcatc
attggctccttcttcatgctcaacctggtgctgggtgtgctctcaggagagtttgccaag
gagcgtgagagggtggagaaccgccgggcattcctgaagctccgccgccagcagcagatc
gagcgggagctcaacgggtacctggagtggatcttcaaagccgaggaagtcatgctggcc
gaggaggacaagaatgcggaggagaagtcccccctggatgtgttgaagagagcagccacg
aagaagagccggaatgacctgatccatgccgaggagggagaggaccggtttcctgacctc
tgtgctgttggatccccctttgcccgtgccagcctcaagagcgggaagacggagagctcg
tcgtacttccgtaggaaggagaagatgttccggttcttcatccgacgcatggtgaaggcg
cagagcttctactgggtggtgctgtgtgtggtggccctgaatactctgtgcgtggccatg
gtgcactacaaccagccacagcggctcaccacggcgctgtactttgcagagtttgttttc
ctgggtctcttcctcacagagatgtcattgaagatgtatggcctggggcccagaagctac
ttccgatcttccttcaactgctttgactttggggtcattgtggggagcatctttgaagtg
gtctgggcagccatcaagccaggaacatcctttgggatcagtgtgctgcgggcactgcgg
ttgctgaggatcttcaaagtcacaaagtactggagctccctgcgcaacctggtggtatct
ctgctaaactccatgaagtccatcatcagcctcctcttcctgctgttcctgttcatcgtg
gtctttgctctactaggaatgcagctattcgggggacagtttaactttagagatgagacc
ccgacaaccaactttgacactttccccgcggccattctcactgtcttccagatcctaaca
ggagaggactggaatgcggtgatgtatcacgggatcgagtcacaaggcggagtcagcaaa
ggcatgttctcctccttttacttcatcgtcctgacgctgtttggaaattacacgctactg
aatgtcttcctggccatcgccgtggacaaccttgccaatgctcaggagctgaccaaggac
gaagaggagatggaagaagcagccaatcagaagcttgctctgcaaaaggccaaagaagtg
gctgaagtcagccccatgtctgctgcaaacatctccatcgctgctgcgccgcagaactcg
gccaaggcgcgctcggtgtgggagcagcgggccagccagctgcggctgcagaacctgcgg
gccagctgcgaggcgctgtacagcgagatggacccggacgagcggctgcgctacgccacc
acgcgccacctgcgccccgacatgaagacgcacctggaccggccgctcgtggtggagctg
ggccgcgacgggccgcgggttcccgccgggggcaaggcccggcccgagggcgcggaggcc
gccgagggcgccgacccgccgcgcaggcatcaccggcaccgcgacaaggccccggccccg
gccccggcccccgcccccgccccggcccccgccccggccccggccccggcggcggcgggc
gagcaggacagggcggacggcccgaaggccgaggccggggagccgggggcccgggaggag
cggccgcggccgcacggcagccgcagcaaggaggcccggagcgagcgcggccgcggcccg
ggccccgagggcggccggcgccaccaccggcgcggctccccggaggaggcggccgagcgg
gagccccggcgccaccgcgcccaccggcacgcgcccgagccgggcaaggagggcggcgcg
gccggggccaagggcgagcggcgcgcgcgccaccgcggcggcccccgggctgggcccagg
gaggccggcagcggggaggagccggcgcggcggcaccgagcgcggcacaaggcgctgccc
acgcacgaggacgcagagaaggaggccgcggagaaggagggcgaggccgaggaccgcgac
aaggagaaggagctgcggaaccaccagcccaaggagccacacggtgacctagaagccagt
gggacgatgggtgtgggccctgtacatgcattgcccagcacttgtctacagaaggtggag
gaacagccagaggatgcagataatcagcggaatgtcacacggatgggcagccaaccctca
gacctgagtgccactgtgcatatcccagtgacgctgaccggtcctcctggggacactgcg
gctgttcccagtggtaatgtggacctggaaagtcaagccgaggggaagaaggaggtggaa
gctgacgatgtgatgaggagcgggccccgacccatcgtcccatacagctctatgttctgt
ttaagccccaccaacctgctccgccgcttctgtcattacatcgtgaccatgcggtacttc
gagatggtcattcttgtggtcatcgccctgagcagcattgccctggctgccgaggaccca
gtgcggacagactcgcctaggaacaacgccctgaagtatatggactacattttcacgggc
gtcttcacctttgagatggtgataaagatgattgatttgggtctgctgctgcatcctggg
gcctacttccgggacctgtggaatattctggacttcatcgtggtcagtggggccctggtg
gcgtttgccttctcgagcttcatgggaggatccaaagggaaagacatcagcaccatcaag
tccctgagagtcttgcgtgtcctgcggcccctcaagactataaaacggctgcctaagctc
aaggccgtgtttgactgtgtggtgaactccctgaagaacgtcctcaacatcctggtcgtc
tacatgctcttcatgttcatttttgctgtcattgcggtgcagctcttcaaagggaagttt
ttctactgcacggatgagtccaaggggctggagagggactgccggggtcaatatttggat
tatgagaaggaggaggtggaagctcaaccacggcagtggaagaaatatgattttcactat
gacaacgtgctctgggctctgctgacactgttcacagtgtccacgggagaagggtggccc
atggtcctaaaacactctgtggacgccacctatgaggagcagggccccagccccgggtat
cgcatggagctgtccatcttctatgtggtctacttcgtggttttccccttcttctttgtc
aatatctttgtggccttgatcatcatcaccttccaggagcagggggacaaggtgatgtct
gaatgcagcctggagaagaatgagagggcttgcatcgactttgccatcagtgccaagccc
ctgacgcgatacatgccccaggacaagcagtcatttcagtacaagacatggacgtttgtg
gtctcacctccctttgagtacttcatcatggctatgatcgccctcaacacagtggtgcta
atgatgaagttctatgatgcaccgtatgaatatgaactaatgttgaaatgcctgaacatt
gtgttcacatccatgttctctatggaatgcgtgctgaagatcatcgccttcggggtgctg
aactatttcagagatgcctggaatgtctttgactttgtcactgtgttgggaagtattact
gatattttagtaacagagattgcgaacaatttcatcaacctcagcttcctccgcctcttc
cgtgctgcccgtctcatcaagctgctccgccaaggctacaccatccgcatcctgctgtgg
accttcgtccagtccttcaaggccctgccctacgtgtgtctgctcatcgccatgctgttc
ttcatctacgccatcattggcatgcaggtgtttgggaatattgccctagatgatgacacc
agcatcaaccggcataacaacttccggacgtttttacaagccttgatgctattgttcagg
agtgccacgggggaggcctggcacgagatcatgctgtcttgtctcagcaaccaggcctgt
gatgagcacgccaatgccagtgagtgtgggagcgactttgcctacttttacttcgtctcc
ttcatcttcctttgctcctttctgatgttgaacctctttgtggccgtgatcatggacaat
tttgagtaccttacacgggactcttccatcctagggcctcaccacctggacgagtttatc
cgggtctgggctgagtacgacccggctgcgtgtgggcgcatcagttacaatgacatgttt
gagatgctgaaacacatgtccccacccctggggctggggaagaaatgccctgctcgagtt
gcatacaagcgcctggttcgtatgaacatgcccatctccaatgaggatatgactgtccac
ttcacgtccacgctgatggccctcattcggaccgcactggagatcaagctggctccagct
ggcacgaagcagcatcagtgtgatgcagagttgaggaaggaaatttcctctgtgtgggcc
aatctgccccagaagaccctggatttactggtgccaccccataaacccgatgagatgaca
gtgggaaaagtgtatgcagctctgatgatatttgacttctataaacagaacaagaccacc
agagaccagattcaccaggccgcgggaggcctgtcccagatgggccctgtgtcgctgttc
caccctctgaaggccacactggagcagacacagccagctgtgctccgaggagcccgggtt
ttccttcggcagaagagctctgcgtccctcagcaatggtggggccatacaaacccaagag
agtggcatcaaggagtctgtttcttggggcactcagaggacccaggaggtaccttgtgag
gcaaggacacccctggagcgtggccactctacagagatcccagtggtgcagccaggaaaa
ccggctgtggatgtccagatgcagagcatggccctgagaggtcctgatggggagccccaa
cctgggctggagagccagggacgagcagcttccatgccccgcctggctgcagagactcag
ccggccccagacgccagccccatgaagcgctccatctccaccctggcgccccaacgcccc
catgtggctcatctctgcaacgcagccctggaccgagcaccagccagccaggctgtgccc
caccaccaccaccgctgccaccgccgcagggacaggaagcagaagtccctggagaagggg
gccagcctgtctgcagacacagatggtgcacccagcagtgctgcggggccagggccaccc
ctgggagaggggcccgcaggctgccggagggagcgcaggcaggagcggggtcggtcccag
gagcggaggcagccctcttcctcttcctcggagaagcagcgcttctactcctgtgaccgc
tttgggggccgtgagccctcacagcccaaaccatccctcagcagccaccccacgtcaccg
acagcggggcaggagccaggacccccgagaccgggtggtggttcagtgaatgggagcccc
ttgttgtcaacatccggtgctagcacccctggccgcagtgggcggaggcagctcccccag
actccgctgactccccgtcccagcgtcacctacaagacggccaactcatcccctgtccac
tttgttggggcgcagaccagcctccccaccttctcccctggtcggcttagtcgtggcctt
tctgaacacaacgctctgctccagagagaccccctcagccagcccctggccgccagctct
agaattggctctgacccttatttggggcagcgtctggacagtgaggacactgcctgcact
cagcctgaggacacactcacctttgaggaggctgtggccaccaactcaggccgctcctcc
cggacttcctacgtgtcctctctgacctcccagtcccaccccctccgccgcgtgcccaac
ggctaccactgcactctgggactcagctcgggcggccgggttcggcacagctaccaccac
cctgaccaagaccactggtgctag
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integrated database retrieval system
