Canis lupus familiaris (dog): 480907 Help Entry 480907            CDS       T01007                                  Symbol HDAC6 Name (RefSeq) histone deacetylase 6 isoform X4   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism cfa  Canis lupus familiaris (dog) Pathway cfa04613   Neutrophil extracellular trap formation cfa05014   Amyotrophic lateral sclerosis cfa05034   Alcoholism cfa05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:cfa00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     480907 (HDAC6)  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     480907 (HDAC6)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     480907 (HDAC6)   09165 Substance dependence    05034 Alcoholism     480907 (HDAC6)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:cfa01009]     480907 (HDAC6)   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cfa03019]     480907 (HDAC6)    04131 Membrane trafficking [BR:cfa04131]     480907 (HDAC6)    03036 Chromosome and associated proteins [BR:cfa03036]     480907 (HDAC6) Enzymes [BR:cfa01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      480907 (HDAC6) Protein phosphatases and associated proteins [BR:cfa01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      480907 (HDAC6) Messenger RNA biogenesis [BR:cfa03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      480907 (HDAC6) Membrane trafficking [BR:cfa04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     480907 (HDAC6) Chromosome and associated proteins [BR:cfa03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      480907 (HDAC6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Hist_deacetyl zf-UBP zf-UBP_var Motif Other DBs NCBI-GeneID:  480907 NCBI-ProteinID:  XP_005641382 Ensembl:  ENSCAFG00000015620 VGNC:  50630 LinkDB All DBs Position X:16379688..16400160 Genome browser AA seq 1148 aa AA seqDB search MTSTGQDSTTTRQRRSRHNPHSPPHDSSVTSKRGVKKGALRHSSPSLAEVKKKGRMKKLS QAAEQDLIVGLQGLDLNLEAKTLCGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLI QDGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPVW IRTNSYTCACLASGSVLRLVDAVLRNEIRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAA RYAQQKHNIERVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTI GFGQGQGYTINVPWNQVGMRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGE MATTPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPILESPSA PCPSAQASLFCALEALEPFWEVLVRSAEALEEDILEEEKAEKEEERPWQPSVLPVLTWPM LQARTGLVYDQRMMGHYNLWDNHHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAEL LTCHSAEYVGRLRATEKMKTRELHREGSNFDSIYICPSTFACAQLATGSVCRLVEAVLAR EVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGT QHIFEEDPSVLYISLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGPRVGDADYL AAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRVVL ILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSLRV MKVEDKEGPSTSELITKKVTQPANPGSAERMTTPEGNILDIDTEKGPSASSVEESTPGQA KSETAVVEFNQDQSLEATTGETTLDQTIPEAATEGTTPGQTTSEEAVGGAEVIQTSCTDN QTPPTSPVQGATPQISPSKLIENLRTLELNIEAEKAPESQIPEEEGLLGEAAGGQDVDDS VLNESCGDHADTDQVVLYAVTPLPWCPHLVAVCPIPESGLDVTQPCQDCGVLQENWVCLS CYQVYCGRYISAHMLHHHEDSGHPLVLSYVDLSTWCYNCEAYVHHQALLDVKNVAHQNKF GEDMPHSH NT seq 3447 nt NT seq  +upstreamnt  +downstreamnt atgacctccaccggccaggattccaccacaaccaggcagcgaaggagtaggcataacccc cattcgcccccccacgactccagcgtcacctcgaagcgaggtgttaagaagggtgcctta cgccactccagccctagtctagcagaggtaaagaagaaaggcagaatgaagaagctcagc caagcagcagagcaagacctaatcgtgggcctgcaagggctggatctgaaccttgaggcc aagacactttgtggcactggcttggtgtttgatgagcaactaaatgaattccactgcctc tgggatgacagctttcctgagggccctgagcggctccatgccatcaaggaacaactgatc caggatggcctcctggaccgctgcgtgtcctttcaggctcggtttgctgaaaaggaggag ctgatgttggttcacagcctagaatacattgatctgatggagacgacccagtacatgaat gagggagagctccgcatcctagctgacacctatgactcagtttatctgcatccggtatgg ataagaactaactcctatacttgtgcctgcctggcctcaggctctgtccttaggctggtg gatgcagtcctgaggaacgagatccggaatggcatggccattgtcaggcctcctggacac cacgcccagcacagccttatggatgggtattgcatgttcaaccatgtggccgtggctgcc cgctacgctcaacagaagcataacattgagagggtccttatcgtggattgggatgtacac catggtcaaggaacacagtttacctttgaccaggaccccagcgtcctctatttctccatc caccgctatgagcagggtcggttctggccccacctgaaggcctctaactggtccaccata ggttttggccaaggccagggatataccatcaatgtgccttggaaccaggtggggatgcga gatgctgactacattgctgctttcctgcgcctccttctgccagtcgcccttgagttccag ccccagctggtcctggtggccgctggatttgatgccctccaaggggaccccaagggtgag atggccaccactccggcagggttcgctcagctaacccacctgctcatgggtctggcagga ggcaagctgatcctatctctggagggcggctacaacctccgcgccctggctgaaggtgtc agcgcctcactccacacccttctgggagacccttgccccatcctggagtctcccagtgcc ccctgcccaagtgcccaggcgtcactcttctgcgccctggaagccctggagcccttctgg gaggtccttgtgagatcagctgaggccctggaggaggacatcctggaggaggaaaaggcg gagaaggaagaggagagaccgtggcagccctcagtgctcccagttctgacgtggcccatg ctgcaggctcgcacagggctggtctatgaccagcggatgatgggtcactacaacttgtgg gacaaccatcacccagagatgcctcagcgagtctttcggatcatgcgccgtttggaagag ctgggccttgcggggcgctgccttaccttgcccacacgtcctgccacggacgctgagctg cttacctgccacagtgccgagtatgtgggccgtctgcgggcaaccgagaagatgaaaacc cgggagctgcaccgcgagggctccaactttgactccatctacatctgccccagcaccttt gcctgtgcgcaactggccactggctctgtgtgccgcctggtggaggctgtactagccaga gaggttttgaatggtactgctgtggtgcgtcccccaggacaccacgcagagcgggatgcc gcttgtggtttctgctttttcaactctgtggctgtggctgctcgccatgcccaagccatc agtgggcatgcactgcggatcctgatagtggactgggatgtccatcatggtaatggaact cagcacatatttgaggaagaccccagtgtgctctacatttccctgcatcggtatgatcat ggcaccttctttcccatgggggatgagggtgccagcagccaggtaggccaggccgcaggc actggcttcactgtcaacgtggcctggaatgggccccgcgtgggtgacgccgactacctg gctgcctggcatcgtctggtgcttcctattgcctatgagtttaacccggaactggtgctg gtctcagctggctttgacgctgcacggggggacccgctggggggctgccaggtgtcaccg gagggctatgcccacctcacccacctgctgatgggcctcgccaatggccgtgttgtccta atcctggagggtggctataacctgacatccatctcagagtccatggctgcctgtacccgt tccctccttggggacccaccaccactgctaaccctgtcgaggcccccactctcgggggcc ctggcctccatcaccgagaccatccaagtccatcgcagatactggcgcagcttgcgagtc atgaaggtcgaagacaaggagggaccctctacttctgagttgatcaccaagaaagtgacc caaccagccaaccctgggtcagctgagaggatgaccacaccagaagggaacattctggac atagacacagagaagggtccctcagcatcatccgtggaagagtccactcccgggcaagct aagtcagagactgctgtggtggagttcaatcaggaccagtccttggaggctaccacaggg gaaaccactctggaccagaccatcccagaggcagccacagaaggaaccacaccaggccag accacctcagaggaagctgtggggggagctgaagtgatccaaacctcatgtactgataac cagactcccccaacctcacctgtgcaaggagccacaccccagatatcccccagtaagctg attgagaatctcaggaccttggaactaaacatcgaggctgagaaggcaccagaatctcag atcccagaagaggaggggctactaggagaggcagctggaggtcaggacgtagatgattct gtgctgaatgagagctgtggggaccatgctgacactgaccaggtcgtgctttatgccgtg acaccgctgccctggtgtccccatttggtggcagtgtgccccatccctgagtcaggcctc gacgtgacccaaccttgtcaggactgtggagtgctccaggagaactgggtgtgtctctct tgctatcaggtctactgcggtcgttacatcagtgctcatatgctccaccaccacgaagac tcaggacacccgctggtcctcagctacgtcgacctatccacctggtgttacaactgtgag gcctatgtccaccaccaggctctcctagatgtgaagaacgtggctcaccagaacaagttt ggggaggacatgccccactcacactaa

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