Canis lupus familiaris (dog): 480928
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Entry
480928 CDS
T01007
Symbol
SMC1A
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X2
KO
K06636
structural maintenance of chromosome 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04110
Cell cycle
cfa04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
480928 (SMC1A)
04114 Oocyte meiosis
480928 (SMC1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfa03036
]
480928 (SMC1A)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
480928 (SMC1A)
Meiosis-specific proteins
Cohesin complex and associated proteins
480928 (SMC1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
480928
NCBI-ProteinID:
XP_013967004
Ensembl:
ENSCAFG00000016241
VGNC:
46541
UniProt:
A0A8C0T3L8
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All DBs
Position
X:complement(36633229..36682028)
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AA seq
1232 aa
AA seq
DB search
MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKT
LRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGSSEYKINNKVVQLHEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKLNK
ELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQS
QGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKLREIEENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQV
MEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLALNLQEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKMNQVEDEVFEEF
CREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLKEDQDKVHMWEQ
TVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHEMEEIRKKLGG
ANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDDISQEEGSSQGE
DSVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQKLNEQQSVLQRI
AAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTCNFQAIVISLKEEFYTKAESL
IGVYPEVAEAMKQQDNHGPKGHRSHEAIGATM
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctgaaactgattgagatcgagaactttaagtcgtacaagggtcggcagatt
atcggaccgtttcagaggttcaccgccatcattggacccaatggctctggtaagtcaaat
ctcatggatgcaatcagctttgtgttgggtgagaaaaccagcaacctgcgagtaaagacc
ttgagggacctgatccacggagcacctgtgggcaagccagctgccaaccgggcctttgtc
agcatggtctactctgaggagggtgctgaggaccgcacctttgctcgtgtcattgttggg
ggttcctctgagtacaagatcaacaacaaagtggtccagctacatgagtacagtgaggaa
ttagagaagttgggcattctcatcaaagctcgtaacttcctcgtcttccagggtgctgta
gaatctattgccatgaagaaccccaaagagaggacagctctatttgaagagatcagtcgc
tctggggagttggcccaggaatatgacaagcgaaagaaggaaatggtaaaggctgaagag
gacacacagtttaattaccatcgcaaaaaaaacatcgcggctgaacgcaaggaagccaaa
caggagaaagaagaggctgaccgctaccagcgcctgaaggatgaggtggtgcgagctcag
gtgcagctgcagctctttaagctttatcacaacgaagtggaaattgagaaactcaataag
gaactggcctctaagaacaaggagatcgagaaggacaagaagcgaatggacaaggtagag
gatgagctgaaggagaagaagaaggagctgggcaaaatgatgcgggagcagcagcagatt
gagaaggagatcaaggagaaggactcagagctgaaccagaagcggcctcagtatatcaaa
gccaaggagaatacctcccacaaaatcaagaagctggaagcagccaaaaagtccctacag
aatgctcagaagcattacaagaagcgtaaaggtgatatggatgagctggaaaaggagatg
ctgtcagtagagaaagcccggcaggagtttgaggaacggatggaagaggagagtcagagt
cagggcagagacttgaccttggaggagaatcaagtgaagaaataccatcggttgaaagaa
gaagccagcaagagagcggctaccttggcccaggagctagagaagttcaatcgggatcag
aaagctgaccaggaccggctggatttggaagagcggaagaaagtagagacagaggctaag
atcaagcaaaagctgcgggagattgaagagaatcagaaacggattgagaaactagaggaa
tacatcaccactagcaagcagtccctagaggagcagaagaagttagagggggagctgaca
gaggaggtggagatggccaagcggcgtattgatgagatcaacaaagagctgaaccaggtg
atggaacagctgggggatgcccgtattgaccgccaggagagcagccgccaacagcgaaag
gcagagattatggaaagcatcaagcgcctgtaccctggctctgtgtatggccgcctcatt
gacctctgtcagcctacacaaaagaagtaccagattgctgtaaccaaagttttgggaaag
aacatggatgccattatcgtggactctgagaagacaggtcgggactgcattcagtacatc
aaggaacagcgtggggagcctgagaccttcttgcctcttgactacctggaggtgaaacct
acagatgagaagctccgggaactgaagggggccaagctggtgattgatgtgattcgctat
gagccaccccacatcaaaaaggccctgcagtatgcttgtggcaatgcccttgtctgtgac
aatgtggaagatgctcgtcgcattgcctttggaggccaccagcgtcacaagacagtggca
ctggatgggaccttgttccagaagtcaggggtgatctctggtggggccagtgatttgaag
gccaaggctcggcgatgggatgagaaagcagtagataagttgaaagagaagaaggagcgg
ttgacagaggagctgaaagaacagatgaaggcaaagcggaaggaagcagagctacgtcag
gtgcagtctcaggcccacggactgcagatgcggctcaagtactcacagagtgacctggaa
cagaccaagacacgacatctagccctgaatctacaggaaaaatccaaactggagagtgag
ctagccaactttgggcctcgcattaatgatatcaagaggatcatccagagccgagagagg
gaaatgaaagacttgaaggagaaaatgaaccaggtagaagatgaggtgtttgaagagttt
tgtcgggagattggtgtgcgcaacatccgggagtttgaggaagagaaggtgaagcggcag
aacgaaattgccaagaagcgtttggaatttgagaatcagaagactcgcttgggcatccag
ttggattttgaaaagaaccaactgaaagaagaccaggataaagtacacatgtgggagcag
acagtgaaaaaggatgaaaatgagatagaaaagctcaagaaggaggagcaaagacacatg
aagatcatagatgagaccatggcccagctgcaagacctgaagaatcagcacctggccaag
aagtcggaggtgaatgacaagaatcatgagatggaggagattcgtaagaaactggggggc
gccaacaaggaaatgacccatttacagaaggaggtgacagccattgagaccaagctggaa
cagaaacgcagtgaccgccacaacctgctgcaggcctgcaagatgcaggacatcaagttg
ccactgtctaagggcactatggatgacattagtcaggaagagggtagctctcagggggag
gattcagtgagtggttcccagcgaacttccagcatctatgcacgagaggccctcatcgag
attgactacggtgacctgtgtgaagatctgaaggatgcccaggctgaggaggagatcaaa
caggagatgaatacactgcagcagaagctgaatgagcagcagagtgtactccagcgtatt
gctgcccctaacatgaaagccatggaaaagctggaaagtgtccgagacaagttccaggag
acctcagatgagtttgaggcagcccgaaagcgagccaagaaagccaagcaggcattcgaa
cagatcaagaaggagcgttttgaccgctttaatgcttgctttgaatctgtggccaccaac
attgatgagatctacaaggccctatcccgcaacagcagtgcccaggcatttctgggccct
gagaaccctgaggagccctacctagatggcatcaactacaactgtgtggctcctggcaaa
cgcttccggcctatggacaacttgtcagggggggagaaaacagtggcggctctggccttg
ctctttgccatccacagctacaagccagcccccttcttcgtcctggatgagatcgatgct
gccctggataacaccaacattggcaaggtggcaaattacatcaaggagcagtcgacttgc
aacttccaggccatcgtcatctctctcaaggaggagttctacaccaaggctgagagcctc
attggagtctaccccgaggtagcagaagccatgaagcagcaagacaaccatgggccaaaa
ggacacagaagccatgaagcaataggagccacaatgtag
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integrated database retrieval system
