Canis lupus familiaris (dog): 480963
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Entry
480963 CDS
T01007
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X25
KO
K10779
transcriptional regulator ATRX
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
480963 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
480963 (ATRX)
03036 Chromosome and associated proteins [BR:
cfa03036
]
480963 (ATRX)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
480963 (ATRX)
Chromosome and associated proteins [BR:
cfa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
480963 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
480963
NCBI-ProteinID:
XP_013967025
Ensembl:
ENSCAFG00000017252
VGNC:
38297
LinkDB
All DBs
Position
X:complement(50787446..51120278)
Genome browser
AA seq
2434 aa
AA seq
DB search
MMENSKEEGASSSEKSKSSGSSRSKRKPSVVTKYVESDDEKPLDETVNEDASNENSENDI
TMQSLPKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQ
QVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCH
NAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKK
KIKVDNEKSNKVYDHTPRFSPKKNSSNCNGEEKKLDDSCSGSVTYSYSALIVPKEMIKKA
KKLIETTTNMNSSYVKFLKQAADNSEINSATKLRQLKAFKSVLADIKKAHLALEEDLNSE
IRALDALNKEKNTKEHKVIDAKSETKVRKGEKPGALERKDISKSEAKLSRKQVDSEHMDQ
SNTVQEQRANKSVSGEHKKSDKKEEPQYEPANTSEDLDMDIVSVPSSVPEDIFENLETAM
EVQSSTDNQGDGNSGTEQELENSSVKLNITSKDNRGGIKSKTTAKVTKELYVKLTPVSLS
NSPIKGADCQEVPQDKDGYKSSGLNPKPENCGLGQEKNDNEHLFESEVPLLSEESDLRRS
PRVKTTPLRRQTETNPPTSNSDEESNEIVKEKQNLSVPMRKKDKRNSSDSAINNPKPNKL
PKSKQSEIVDQNSDSDEMLAILKEVSRMSHSSSSDTDINETHTNHEKTLYDLKTQTGKDD
KGKRKRKSSTSGSDYDIKKGKSAKRSIISKKKRQNQSESSNYDSELEKEIKSMSKIGAAR
TTKKRVPNKEDYDSSEDEKHRKKGMDNQGQKNLKTAHEGSSDDAERKQERENFSSAEGTI
DKDRTNMDLRDQISKNQQSGVSSDGADKLPSGKEASFNSPEDKKVAETKEKSKHLKTKMC
KKVQAGLSDILENFPKKEQSDESSEDDKKQSKKGTEVKEKKTTDLKKSTIKMEQQYESSS
DSTEKLPEGEVVSPFPKGIKQNKNDTTYGEKKSKKTKDKTSKKKGEVSDNAEKLQGKRDS
CDSSEDKKSKNGASNRVKKRCNLSEKSSRKRQDCSSSDTEKYSMKEDGCDSSDKRLNRIE
LNERRNLNSKRNTKEVHIGSSSSDGEESSEDNKKLKKQRTSAKKKTVNVKEKMRNSLRTS
TKRKQADITSSSSSDIGDDDQNSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSK
SVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKHSEENPG
DEGTKNQVNYESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKMKPKEHKEAKGRNRR
KVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQE
DSSSENKSNSEEDKEDDEEEEEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKE
EEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIK
LKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDF
STALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVM
IIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIR
SRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRV
MKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGN
SNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETS
MSLSSDDYAKKKKTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDEIGSNPS
VSLKLEESKATSSSNPSSPAPDWYKDFVTDADAEILEHSGKMVLLFEILRMAEEIGDKVL
VFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKW
AEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTK
PVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP
NSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY
EAEKKGLTMRFNIPTGTNLPPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEA
TNSVTAVRIQPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQ
QMLISCVQRILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRG
MYQSVAGGMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaacagcaaggaagagggagctagctcttcggaaaaatccaaatcatcagga
tcatcacgatcaaaaaggaaaccatcagttgtaacaaagtatgtcgaatctgatgatgaa
aaacctttggatgaaactgtaaatgaagatgcttctaatgaaaattcagaaaatgatatt
actatgcaaagcttgccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaa
gacaaagatgattttaaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaat
ctcaaaaaacgcggagaagatgggcttcatgggattgtgagctgcacagcttgtggacaa
caggtcaatcattttcagaaagattccatttatagacatccttcactgcaagtacttatt
tgtaagaattgctttaaatattacatgagtgatgatattagccgagactctgatggaatg
gatgaacaatgtaggtggtgtgcagaaggtggaaacttgatttgttgtgacttttgccat
aatgccttctgcaagaaatgcattctgcgcaaccttggccgaaaagaactctctacaata
atggatgaaaacaaccagtggtattgctatatttgtcacccagaacctttgttggacttg
gtcactgcatgtaatagtgtatttgaaaatttagaacagttgttgcaacaaaataaaaag
aagataaaagttgacaatgaaaagagtaataaagtatatgaccatacacccagattctct
ccaaagaaaaatagttccaattgtaatggagaagaaaagaaattagatgattcatgttct
ggttcagtaacctactcttattcagcactaattgtgcccaaagagatgattaagaaggca
aaaaaactgattgagactacaactaacatgaactccagttatgtgaaatttttgaagcag
gcagcagataattcagaaatcaattctgctacaaagttacgtcagcttaaggcttttaaa
tctgtgttggctgatatcaagaaagctcatcttgcattagaagaagatttgaattcagag
attcgagctttggatgctctaaacaaagagaaaaataccaaagagcataaggtcatagat
gctaagtctgaaacaaaagtacgaaaaggagaaaaacccggtgctttggaaaggaaggat
atttcaaaatccgaagctaaactgtcaagaaagcaggtggatagtgagcacatggatcag
agtaatacagtacaggaacaaagagcaaataaaagtgtcagtggtgaacataagaaatct
gataaaaaagaagaacctcagtatgaacctgctaacacttctgaagatttagacatggat
attgtttctgttccttcctcagttccagaagacatttttgagaatcttgagacagctatg
gaagttcagagttcaacagataatcagggagatggcaatagtggaactgagcaagaactg
gagaattcttctgtaaaattaaatattacttccaaagacaacagaggaggtattaaatca
aaaactacagctaaagtaactaaagaattatatgttaaactcactcctgtttccctttct
aattctccaattaaaggtgctgattgtcaggaagtaccacaagataaagatggctataaa
agttctggtctgaaccctaagccagagaactgtggacttggacaggaaaagaatgataat
gagcatttgtttgaaagtgaagttccattactctcagaagaatctgatcttcgaagatct
ccacgtgtaaagaccacacccttgaggcgacagacagaaaccaatcctccaacatctaat
tcagatgaagaaagtaatgaaatagttaaggagaaacaaaacctatcagttccaatgaga
aaaaaggataagcgaaattcttctgacagtgctataaataatcctaaacctaataaattg
cctaaatctaagcagtcagagattgtggatcagaattcagattctgatgaaatgttagca
atcctcaaagaggtatccaggatgagtcacagttcttcttcagatactgatattaatgaa
actcatacaaatcacgagaagactttatatgatttaaagacccaaacagggaaagatgat
aaaggaaaaaggaaacgaaaaagttctacttctggttcagattatgacattaaaaaaggc
aaatcagctaaaagatctataatttctaaaaagaaacgacaaaaccagtctgaatcgtcc
aattatgactcagaattagaaaaagagataaaaagcatgagtaaaattggggctgccaga
acaaccaaaaaaagagttccaaataaagaagactatgattcttctgaagatgaaaaacac
agaaaaaaaggaatggataatcaagggcagaaaaatttgaagactgcccatgaaggatca
tctgatgatgctgaaaggaaacaagagagagagaatttctcttcagctgaaggcacaatt
gataaagacagaacaaacatggacttaagagatcaaatctctaagaatcaacagtcaggt
gtttcttctgatggtgctgataagctgccttcaggaaaggaggctagttttaattctcca
gaagataaaaaggttgctgaaactaaagaaaagagtaagcatttgaaaactaaaatgtgt
aagaaagtacaggcaggcttatctgacattcttgagaatttcccaaagaaagaacagagt
gatgaatcctctgaagatgataaaaagcagagtaaaaagggaactgaagtaaaagaaaag
aaaactacagacttgaagaaaagtacaattaagatggaacaacagtatgaatcatcatct
gatagcactgagaaactacccgagggagaagttgtttctccttttcctaaaggtataaaa
caaaataagaatgatacaacttatggagaaaagaaaagtaaaaaaacaaaagataaaact
tctaaaaagaaaggtgaagtatctgataatgctgagaaattacagggaaaaagagatagt
tgtgattcttcagaagataaaaagagtaagaatggggcatccaatagagtgaagaaaaga
tgtaacttgtctgaaaagagttcaaggaagagacaagattgttcatcatctgatactgag
aaatattccatgaaagaagacggttgtgattcttctgataagagactgaatagaatagaa
ctgaatgaaagaagaaatttaaattcaaagagaaataccaaggaagtacatattggctca
tcatcttctgatggtgaggaaagttctgaagacaataaaaagctaaagaaacagagaact
tcagcaaaaaagaagacagtcaatgtcaaggagaaaatgagaaactccctaagaacaagc
actaaaaggaagcaagctgacattacatcatcatcttcttctgatataggagatgatgat
cagaattctgtaggcgagggaagcagtgatgagcagaaaattaagcctgtgactgaaaat
ttagtgctatcttcacatactggattttgccaatcttcaggagatgaagccttatctaaa
tcagttcctgtcacagtggatgatgatgatgacgacaatgatcctgagaatagaattgcc
aagaagatgcttttagaagaaattaaagccaatctttcctcagatgaggatggatcttca
gatgatgaaccagaagaagggaaaaaaagaactggaaaacacagtgaagaaaacccagga
gatgaaggaacaaaaaatcaagtcaattatgaatcagattcagattctgaagaatctaag
aagccaagatacagacataggcttttgaggcacaaactcactgtgagtgatggagaatct
ggagaagaaaaaaagatgaagcctaaagagcacaaagaagccaaaggcagaaatagaagg
aaagtaagcagtgaagattctgaagattctgatttccaagaatcaggagttagtgaagaa
gttagtgaatctgaagatgaacaacggcccagaacaagatctgcaaagaaagcagagttg
gaagagaatcagcggagttataaacagaaaaagaaaaggcgacgcattaaggttcaagaa
gactcatccagtgaaaacaagagtaattctgaagaagataaagaagatgatgaagaggaa
gaggaagaagaagaagatgaaaatgatgattccaagtctcctggaaaaggcagaaagaaa
attagaaagattcttaaagatgataaactaagaactgagacacaaaatgctcttaaggaa
gaggaagagaggcgaaaacgtattgctgagagggaacgtgagcgggaaaaattgagagag
gtgatagaaattgaagatgcttcacccaccaagtgtccaataacaaccaagttggtttta
gatgaagatgaagaaaccaaagaacctttagtgcaggttcatagaaatatggtcatcaaa
ttgaaaccacatcaagtagatggtgttcagtttatgtgggattgctgctgtgagtctgta
aaaaaaacaaagaaatctccaggttcgggatgcattctagcacactgcatgggccttggt
aagacattacaggtggtaagttttcttcatacagttcttttgtgtgacaaattggatttc
agcacagctttagtggtttgtcctcttaatactgctttgaattggatgaatgaatttgag
aagtggcaggaaggattaaaagatgatgagaagcttgaggtctctgaattagcaactgtg
aaacgtcctcaggagagaagctacatgctgcagaggtggcaagaagatggtggtgttatg
atcataggctatgagatgtacagaaaccttgctcaaggaaggaatgtgaagagtaggaaa
cttaaggaaatctttaacaaagctttggttgatccaggcccagactttgttgtttgtgat
gaaggccatattctgaaaaatgaagcatctgcagtttcaaaagctatgaattctatacgg
tcaaggaggaggattattttaacaggaacaccacttcaaaataacctaattgagtatcat
tgcatggttaactttatcaaggaaaatttgctgggatccattaaggagttcaggaatcga
tttataaatccaatccaaaacggtcaatgtgcagattctaccatggtagatgtcagagta
atgaaaaagcgtgctcacattctctatgagatgttagctggatgtgttcagaggaaagat
tatacagcattaacaaagttcttgcctccaaaacatgaatatgtgttagctgtgagaatg
actcctattcagtgcaagctctatcagtactatttagatcacttaacaggtgtagggaat
agcaatgaaggtggacgaggaaaggcaggtgcaaaacttttccaagattttcagatgtta
agtagaatctggactcatccttggtgtttgcagctggactacattagcaaagaaaataag
ggatactttgatgaagacagtatggatgaatttatagcttcagattccgatgaaacctcc
atgagtttaagctccgatgattatgcaaaaaagaagaaaacaaaggggaaaaaagggaaa
aaagatagtagctcaagtggaagtggcagtgacaatgatgttgaagtgattaaagtctgg
aattcacgatctcgaggaggtggtgaaggaaatgtggatgaaataggaagcaatccttca
gtttcattaaagctggaagaaagtaaagctacttcctcttctaatccaagcagtccagct
ccagactggtacaaagattttgttacagatgctgatgctgagattttagaacattctgga
aaaatggtacttctctttgaaattcttcgaatggcagaagaaattggggataaagtcctt
gttttcagccagtctctcatatctctggacttgattgaagattttcttgaattggccagt
agggaaaagacagaagataaagataaacctcttatatataaaggtgaagggaagtggctg
cgaaacattgactattaccgtttagatggttctactactgcacaatcaaggaaaaaatgg
gctgaagaatttaatgatgaaactaatgtgagaggacgattgtttatcatttctaccaaa
gcaggatctcttggaattaatctggtagctgctaatcgagtgattatatttgatgcttct
tggaatccatcttatgacatccagagtatattcagagtttatcgctttggacaaactaaa
cctgtgtatgtatataggttcttagctcagggcaccatggaagataagatttatgatcgg
caagtaactaagcagtcactatcttttcgagttgttgatcagcagcaagttgagcgtcat
tttaccatgaatgagcttactgaactttatacttttgagccagacttattagatgaccct
aattcagaaaaaaagaagaagagggatactcccatgctgccaaaggacaccatacttgca
gaacttcttcaaatacataaagaacacattgtaggatatcatgaacatgattctcttttg
gaccacaaagaagaagaagaattgactgaagaagaaagaaaagcagcttgggctgagtat
gaagcagagaagaagggactgaccatgcgtttcaacataccaactgggaccaatttaccc
cctgtcagtttcaactctcaaactccttatattcctttcaatttgggagccctgtcagca
atgagtaatcaacagctggaggacctcattaaccaaggaagagaaaaagttgtggaagca
acaaacagtgtaacagcagtgaggattcagcctcttgaagatataatttcagctgtatgg
aaggaaaacatgaatctctcagaggcccaagtacaggcattagcattaagtagacaagcc
agccaggagcttgatgttaaaagaagagaagcaatctataatgacgtactgacaaaacag
cagatgttaatcagctgcgttcagcgaatacttatgaaccgaaggctccagcagcagtac
aatcagcagcaacagcaacaaatgacttatcaacaagcaacactgggtcacctcatgatg
ccaaagcctccaaatttaatcatgaatccttctaactaccagcaaattgatatgagagga
atgtatcagtcagtagctggtggtatgcagccaccacccttgcagcgtgcaccaccccca
atgagaagcaaaaatccaggaccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
