Canis lupus familiaris (dog): 481234
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Entry
481234 CDS
T01007
Symbol
RANGAP1
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
481234 (RANGAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
481234 (RANGAP1)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
481234 (RANGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
CPSF100_C
Nop14
RNA_pol_Rpc4
PI3K_1B_p101
BUD22
IFN-gamma
Presenilin
Rrn6_K-rich
DNA_pol_phi
CCD97-like_C
Radial_spoke
DDHD
Motif
Other DBs
NCBI-GeneID:
481234
NCBI-ProteinID:
XP_005625889
Ensembl:
ENSCAFG00000001104
VGNC:
45340
LinkDB
All DBs
Position
10:23886012..23917770
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AA seq
628 aa
AA seq
DB search
MDNLDPLAILVLFEEWDPQTESSQDDQAVCRFPGEPSNVASMASEDIAKLAETLAKTQVA
GGQLSFKGKSLKLNTAEDAKDVIKEIEDFDGLEALRLEGNTVGVEAARVIAKALEKKSEL
KRCHWSDMFTGRLRSEIPPALTSLGEGLITAGAQLVELDLSDNAFGPDGVRGFEALLKSS
ACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLGLKVFVAGRNRLENDGATA
LAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRVINLNDNTFTEKGAVAMAKT
LKTLRQAEVINFGDCLVRSKGAVAIAEAVRGGLPKLKELNLSFCEIKRDAALAVAEAVAD
KAELEKLDLNGNMLGEEGCEQLQEVLDGFNMARVLASLSDDEGEDDEEEEEEEEEEEEGE
EEEEEEDEEEEEEEEEEEEPQQGQGEESSTPSRKILDPNSEEPAPVLSSPPPADVSTFLA
FPSPEKLLRLGPKSSVLIAQQTDTSDPEKVVSAFLKVSSVFKDEAPVRTAVQDAVDALMK
KAFSSSSFNSNAFLTRLLVHMGLLKSEDKIKAIANLYGPLMALNHMVQQDYFPKALAPLL
LAFVTKPNGALESCSFARHSLLQTLYKV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggataacctggatcccttagccatcctagtcctgtttgaggaatgggaccctcaaaca
gagagcagccaggatgatcaggcagtttgcagatttccgggggagcccagcaacgtggcc
agcatggcctctgaagacattgccaagctagcagagacacttgccaaaacccaggtggct
gggggtcagctgagtttcaagggcaagagcctcaaactcaacactgcggaagatgccaaa
gacgtgattaaagagattgaagactttgatggcttagaggctctgcgcctggagggcaac
acggtgggcgtggaagcagccagagtcatcgccaaggccttggagaagaagtcagagttg
aagcgatgccactggagtgacatgttcacggggaggctgcggtccgagatcccaccagcc
ctgacctcactaggggaaggactcatcacagccggggcgcagctggtggagctggacctg
agcgacaacgcatttgggcctgacggtgtgcgaggctttgaggccctgctcaagagctct
gcctgcttcacccttcatgagctcaagctcaacaactgtggcatgggcatcggcggtggc
aagatcttggcagcggctctgactgagtgtcaccggaaatccagtgcccaaggcaagcca
ctgggcctgaaggtcttcgtggccggcagaaaccgtctggagaacgacggagccaccgct
ttggcagaagctttcgggatcatcgggactctggaggaggtccacatgccacagaatggg
attaatcatcctggcgtcactgccctggcccaggctttcgcaatcaaccccctgctgcgc
gtcatcaacctgaacgacaacaccttcactgagaagggcgctgtggctatggccaagaca
ctgaagaccttgcggcaggcggaagtgatcaactttggggactgcctggtgcgctccaag
ggtgccgtcgccatcgccgaggctgtgcgcgggggtctgccgaagctgaaggagctgaac
ttgtcattctgtgaaatcaagagagatgctgctctggctgtcgccgaggccgtggcggac
aaggccgaactggagaagctggacctcaatggcaacatgctgggagaagaaggctgcgag
cagctccaggaggtgctggatggcttcaacatggccagggtgctggcttccctcagtgat
gatgagggcgaggatgacgaggaggaggaggaagaggaggaggaggaagaggaaggagaa
gaggaggaagaggaagaagatgaagaagaggaggaggaagaggaggaagaggaagagcca
cagcaagggcaaggagaggagtcatccacaccatcaaggaagattctggacccaaacagt
gaagagccagctcccgtgctgtcctccccgcctcctgcagacgtctccactttcctggct
ttcccctctccagagaagctgctgcgcctcggccccaagagttcagtgctcatagcccag
cagactgatacatctgacccagaaaaggtggtctctgccttcctgaaggtgtcgtctgtg
tttaaggacgaagccccagtgaggacggcagtgcaggatgcagtagatgccttgatgaag
aaggccttcagctcatcttccttcaactccaacgccttcctcacccggctcctcgtccac
atgggtctgctcaagagtgaagacaagatcaaggccattgccaacttgtacggcccgctg
atggcattgaaccacatggtgcagcaggactacttccccaaggcccttgcacccctgctg
ctggcattcgtgaccaagcccaatggtgccctggagtcctgctcctttgcccgccacagt
ctactgcagacgctgtacaaggtctag
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