Canis lupus familiaris (dog): 481611
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Entry
481611 CDS
T01007
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
481611 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfa03019
]
481611 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
cfa03016
]
481611 (ZCCHC7)
Messenger RNA biogenesis [BR:
cfa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
481611 (ZCCHC7)
Transfer RNA biogenesis [BR:
cfa03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
481611 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
481611
NCBI-ProteinID:
XP_005626881
Ensembl:
ENSCAFG00000024624
VGNC:
53504
UniProt:
A0A8I3RXL8
A0A8P0N5E8
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All DBs
Position
11:52024633..52276570
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AA seq
545 aa
AA seq
DB search
MMFGGYETIEAYEDDLYREESSSELSVDSEVEFQLYSQVHYAQDLENIIREEEHEEKNSG
NSESPSSKPNQKNLIILSDSEVIQLSDGSEVITLSDEDSIYRCKRKNFRVQAKEKTQSPP
ASLHSNKLSDKKCKRNIEQPKPEEMPGTIREVMIIEVSSSEEEESTISESDNVENWMLLG
CEVDDKDDDILLNLVGCENSVNEGEDGVSWFISDKDAEAQIVNNRSSGRWTHRYYSANKN
VTCRNCDKCGHLSKNCPLPQKVRPCCLCSERGHLQYACPARFCLGCSLPMSSTHRCLERS
SWRKRCDRCDMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSGQSALVYCYNCGQEGHYG
HECTERRMFNQTFPTSPFIFYYDDKYEIREREQRIKRKVKELQKNGDFPRQFKRPHMEAA
DKRPHQHKRKSHASCRNNRWPQEKKETQKEMSRSNKEREKHRKADRCHDLDEDFPRGPKL
HSSSGTFRTQKAPKSFHHSSHSHKPREDKLPREGKRSKHKKKSHLEGDGNDNLFLIKQRK
KKSKL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggtggttatgagaccatagaagcgtatgaggatgacctttatcgtgaagag
tcatctagtgaactgagtgttgatagtgaggtggaatttcagctctacagccaagttcat
tatgcccaagatcttgaaaatatcattagagaggaagaacatgaagagaagaactctggg
aattctgaatcacccagtagtaaaccaaatcagaagaacttaattatcctttcagatagt
gaggtcatccagctctcagatgggtcagaggtaatcactttgtctgatgaagatagtatt
tacagatgcaaaagaaagaattttagagtccaagcaaaagaaaagacccaaagtcctcct
gcatctcttcattctaataagttgagtgataagaaatgcaagaggaatattgagcagcct
aaacctgaagagatgccaggtacaatccgagaggtcatgattatagaggtcagttcaagt
gaagaggaagagagcaccatttcagaaagtgataatgtggaaaactggatgctgctggga
tgtgaagttgatgataaagatgatgatatccttctcaatcttgtgggatgtgaaaactct
gtaaatgaaggagaagatggtgtaagttggttcatcagtgacaaagatgcagaggctcag
atagttaataatagatcgtctggaagatggacccaccgatactactcagccaacaaaaat
gttacttgtagaaattgtgacaaatgtggccatttatcgaaaaactgcccccttccacaa
aaagtccgcccctgctgtctctgctctgagagaggacacctccagtatgcctgcccagcc
cgcttttgcttaggctgttctttgcctatgtcttccactcacagatgtcttgaaagatca
tcctggagaaagcgatgtgaccgatgtgatatgataggccattatgctgatgcttgccca
gaaatctggaggcagtatcacctaacgaccaaacctggaccacccaaaaagccgaagacc
ccttctggacaatcagccttagtgtattgctacaactgtgggcaagaaggccattatgga
cacgaatgtacagaaagacgaatgtttaaccagacgtttccaacatctccattcatcttc
tactatgatgacaaatatgaaattcgagagagagaacagagaataaaacgaaaagtgaaa
gaactccagaagaatggagatttcccaaggcaattcaagagacctcacatggaagcagca
gataagaggccccaccaacacaaaaggaagagccatgcctcatgtagaaacaacaggtgg
cctcaagaaaagaaagaaacccaaaaagaaatgagcaggagcaataaagaacgagagaaa
cacaggaaggctgacaggtgtcatgatttggatgaggacttccccagaggcccaaaactc
cactcttcttctggcactttcagaacccagaaggctcctaagtccttccaccactcatcg
cattctcacaagccaagagaagacaagctgcccagagagggcaaacggagcaagcataag
aaaaagagccacttggagggtgatggcaatgataatttgtttctcattaagcagaggaaa
aaaaaatccaagttgtga
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