Canis lupus familiaris (dog): 481651
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Entry
481651 CDS
T01007
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X3
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa02010
ABC transporters
cfa04148
Efferocytosis
cfa04975
Fat digestion and absorption
cfa04979
Cholesterol metabolism
cfa05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
481651 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
481651 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
481651 (ABCA1)
04979 Cholesterol metabolism
481651 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
481651 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfa02000
]
481651 (ABCA1)
Transporters [BR:
cfa02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
481651 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
481651
NCBI-ProteinID:
XP_013973368
Ensembl:
ENSCAFG00000002727
VGNC:
37422
LinkDB
All DBs
Position
11:complement(59222894..59351153)
Genome browser
AA seq
2262 aa
AA seq
DB search
MASWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDAQRLLLYSQKDT
SMKDIHEVLMTLQQVESFSSTGLKLQDFLVDNETFSGFLIHNLSLPRLTVDKMLEANVSL
HKVFLQGYQLHLTNLCSGSKLEEVIQLGEQEVSTLCSLPKEKLDAAEQVLRSSMDILKPI
LTELNSTSPFLSNQLAKATKTLLDSLGTLAQELFSMNSWSDMRQEVMFLTNVNSSSSSTQ
IYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTDEDAGSFYDNSTTPYCNDLM
KNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDMQGMWEEL
SPKIWTFMESNPEMDLVRTLLDSRSNDHFWEQRLDGLDWTAKDILAFLAKHPEDVQSANG
SVYTWREAFNETDQAIQTISRFMECVNLNKLEPVATEVRLINKSMELLDERKFWAGIVFT
GITPGSIELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDV
VEQAIIRVLTGTERKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDSGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVF
VFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFTLKLFV
SLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTTSVSMMLFDAFLYGVMT
WYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGVSEICMEEEPTHLKLGV
SIQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYI
LGKDIRFEMNTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDV
GLPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYR
QGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSL
SSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVED
IGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDA
ETSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDVDPESRETDLLSGMDGKGSYQV
KGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLEL
QPWMYNEQYTFVSNDAPEDMSTQELLNALTRDPGFGTRCMEGNPIPDVPCSVGEEEWTTA
PVPQTITDLFQNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQN
LTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAIKQVK
KHLKLAKDSSADRFLSNLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQ
KGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLA
LLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIRPRPIKAKFPPLNDEDEDVKRERQRILDGGGQNDILEIKELTK
IYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILS
DIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGE
KYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSSPDLKPVQEFF
GLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctggcctcagctgcgcctgctgctgtggaagaacctcaccttcagaagaagg
cagacctgtcagctgttgctggaagtggcctggcctctgtttatcttcctgatcctgatc
tccgtgcggctgagctacccgccctatgagcaacatgagtgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttggattcaggggattatctgtaatgccaataacccc
tgcttccgctatccgactcctggtgaggcccctggggtggttggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcagcggctccttttatatagccagaaagacacc
agcatgaaggacatacacgaggttctgatgacgttacagcaggttgagagtttcagttca
acaggcttgaaacttcaggatttcctagtggacaatgaaaccttctctggattcttgata
cacaacctttctctgccaaggctcactgtggacaaaatgctggaggctaatgtcagcctc
cacaaggtatttctgcaaggctaccagttacatttgacgaatctgtgcagtggatcgaag
ttagaagaggtgattcaacttggtgaacaagaagtttccacgctttgcagcttgccaaag
gagaagctggatgcagcagagcaagtgcttcgttccagcatggacatcctgaagccgatc
ctgacagaactaaactctacatctcccttcctgagcaaccaattggctaaagccacaaaa
actttgttggatagtctcgggactctggcccaagagctgttcagcatgaacagctggagt
gacatgcgccaggaggtcatgttcctgaccaacgtgaacagctccagctcctccacccag
atctaccaagctgtgtcccgcattgtctgtggccaccccgagggggggggcctcaagatc
aagtccctcaactggtacgaggacaacaactacaaagccctctttggtggcaacggcacg
gacgaagatgctggcagcttctatgacaattctacgactccttattgcaatgatctgatg
aagaatttggagtctagtcctctttcccgcatcatctggaaagctctcaagcctctgctt
gttgggaagatcctgtatacacctgacacgccagccacaaggcaggttatggccgaggtg
aataagacctttcaggagctggctgtgtttcatgatatgcaaggcatgtgggaagagctc
agccccaagatctggaccttcatggagagtaacccagaaatggaccttgttcggacactg
ttggacagcagaagcaatgaccacttttgggaacagcgattagatggcttagactggact
gccaaagatatcctggcatttctggccaagcacccagaggatgtccagtctgctaatgga
tctgtgtacacctggagagaagccttcaatgagaccgaccaggcaattcagaccatctct
cgattcatggagtgtgtcaacctgaacaagctggaaccagtagcaacagaagtccggctt
atcaacaagtctatggagttgctggatgagaggaagttctgggctggtatcgtgttcacc
ggaatcactccgggcagtattgagctgccccgtcacgtcaagtacaagatccgaatggac
attgacaatgtggagaggacaaataaaatcaaggatgggtactgggacccgggtcctcgg
gctgacccctttgaggatatgcggtacgtctgggggggctttgcctacttgcaagatgtg
gtggagcaggcgatcatcagggtgctgacgggcaccgagaggaaaactggcgtctatgtg
caacagatgccctacccctgttacgtcgatgacatcttcctgcgggtgatgagccggtcc
atgcctctgttcatgacgctggcctggatctactccgtggccgtgatcatcaagggcatc
gtgtacgagaaggaggcacggctgaaggagaccatgcgcatcatgggtctggacagcggt
atcctctggttcagctggttcatcagtagcctcatcccgctgctcgtgagcgccggcctg
ctggtggtcatcttgaaattaggaaacctgctgccctacagcgaccccagcgtggtgttt
gtcttcctgtctgtgttcgccgtggtgaccatcctgcagtgcttcctcatcagcacactc
ttctccagggccaacctggcggcagcctgtgggggcatcatctacttcatcctatacctg
ccctacgtgctgtgcgtggcgtggcaagactatgtgggcttcacactcaagctctttgtg
agcctgctatctcctgtggcctttgggtttggctgtgagtactttgccctttttgaggag
cagggcattggggtgcagtgggacaacctgtttgagagccccatggaggaagatggcttc
aacctcaccacgtcagtctccatgatgctgttcgacgcctttctctatggagtgatgacg
tggtacatcgaggctgtctttccaggccagtatggaatccccagaccctggtattttcct
tgcaccaaatcctactggtttggtgaggaaagtgatgagaagagccaccctggttccagc
cagaagggagtatcggaaatctgcatggaggaggaacccacacacctgaagctgggcgtg
tccattcagaacctgatgaaggtttaccgggatggcatgaaggtggctgtggatggcctg
gccttgaatttctatgagggccagattacctccttcctgggccacaatggagctggaaag
accaccaccatgtcaatcctgactgggttgttccctcccacctcgggcactgcctacatc
ctggggaaagacattcgctttgagatgaacaccatccggcagaacctgggagtctgcccc
cagcataatgtgctgtttgacatgctgactgtggaagaacacatctggttctatgcacgt
ctaaaggggctctcagagaagcacgtgaaagcagagatggagcaaatggccttggatgtt
ggtttgccacccagtaaactgaaaagcaaaacaagtcagctgtcaggtggaatgaagaga
aagctgtctgtggctttggcctttgttgggggatccaaggttgtcattctggatgagccc
acagccggcgtggacccttactcccgtaggggaatatgggagctactgctcaaatatcga
caaggtcgcaccattattctctccacacaccacatggatgaagcagacatcctgggggac
aggattgccatcatctcccatgggaagctgtgctgcgtgggctcctccctgtttctgaag
aaccagctgggaacaggctactacctgaccctggtcaagaaggatgtggaatcctccctc
agttcctgcagaaacagcagtagcactgtgtcatatctgaaaaaggaggacagtgtttct
cagagcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgat
gtctctgctatctccaacctcatcaggaagcatgtggctgaggcccggctggtggaagac
attgggcatgagctgacttacgtgctgccctacgaagctgccaaagagggggccttcgta
gaacttttccatgagattgatgaccggctctcagacctgggcatctctagttacggcatc
tcggagacgaccctggaagaaatatttctcaaagtggctgaagagagtggggtggatgct
gagacctcagacggcaccttgccagcaagacgaaacagacgagcctttggggacaagcag
agctgtcttcgcccattcactgaagatgatgccattgatcctaatgattctgatgtagat
ccagaatccagagaaacagacctgctcagcgggatggacggcaaaggctcctaccaggtc
aagggctggaaactcacacagcagcagtttgtggcacttctgtggaagaggctgctgatt
gccagacggagtcggaagggattctttgctcagatcgtcctgccagctgtgtttgtctgc
attgctctggtgttcagcctgattgtgcccccctttggcaagtaccccagcctggaactt
cagccctggatgtacaacgaacagtacacatttgtcagtaacgacgctcctgaggacatg
agcacccaggaactcttgaatgccctcaccagagaccctggcttcgggacccgatgtatg
gaaggaaatccaatcccagacgtgccctgctccgtgggggaggaggagtggaccaccgcc
ccagttccccagaccatcacagacctcttccaaaatgggaactggacgatggagaatccc
tcacccacgtgccagtgtagcagtgacaaaatcaagaagatgctgcccgtgtgtcccctg
ggggcagggggcctgcctcccccacagagaaaacagaacactgcagacatccttcagaac
ctgacgggaagaaacatttcggactatctggtgaagacctatgtgcagatcatagccaaa
agtttaaagaacaagatctgggtgaatgagtttaggtatggaggattttccctgggtgcc
agtaattctcattcacttccttcaagtcaagaagttaataatgccatcaagcaagtgaag
aagcacttgaagctggccaaggacagttctgcagatcgatttctcagtaacttggggagg
ttcatgacaggactggacacgaaaaataacgtcaaggtgtggttcaacaacaagggctgg
catgccatcagctctttcttgaatgtcatcaacaatgccattctccgggccaacctgcag
aagggagagaaccccagccagtatgggattactgctttcaatcaccccctgaatctcacc
aagcagcagctctcggaagtggctctgatgaccacatccgtggatgtcctggtgtccatc
tgtgtcatctttgcaatgtccttcgtcccggccagcttcgttgtgttcctgatccaagag
cgggtcagcaaagcaaagcacctgcagttcatcagtggcgtgaagcctgtcatctactgg
ctctccaattttgtgtgggatatgtgcaactatgtggttcctgccacgctggtcattatc
atcttcatctgcttccagcagaagtcctacgtgtcctctaccaacctgcctgtcctagct
cttctactgctgctgtacgggtggtccatcacacctctcatgtacccagcctccttcgtg
ttcaagatccccagcacagcctacgtggtcctcaccagcgtgaacctcttcatcggcatc
aacggcagtgtggccacttttgtgctggagctctttaccaacaataagctgaataacatc
aatgatatcctgaagtctgtcttcttgatctttccacatttttgcctgggacgggggctc
attgacatggtgaaaaaccaggcaatggctgatgccttggaaaggtttggggagaaccgt
tttgtttcaccactgtcttgggacttagtgggacgaaacctcttcgccatggccgtggaa
ggggtggttttcttcctcatcactgttctaatccagtacagattcttcatcaggcccagg
cctatcaaagcaaagtttccccctttgaatgatgaggatgaagatgtgaagcgggaaaga
cagagaattcttgatggtggaggacagaatgacatcttggaaatcaaggagctgactaag
atatatagaagaaagaggaagcctgctgttgacaggatatgcgttggcattcctcctggc
gagtgctttggacttctaggagttaatggggctgggaaatcatcaactttcaagatgtta
actggagataccactgttaccagaggagatgctttccttaacaaaaacagtatcttatca
gatatccatgaagtgcatcagaacatgggctattgccctcagtttgatgccatcacggag
ttactgaccggaagagagcacgtggagttctttgccctcttgagaggagtcccagagaag
gaagttggcaaggttggtgaatgggcaattcggaaactgggcctcgtaaagtatggagaa
aaatatgctggtaactatagtggaggcaataagcgcaagctctcgacagccatggctctg
attggtgggcctcccgtagtctttctggatgaacctaccacaggcatggatcctaaagcc
cgacgattcttgtggaattgtgccttaagtattgttaaggaagggagatcagtagtgctt
acatctcatagtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaat
gggaggttcaggtgccttggcagcgtccaacatctgaaaaataggtttggagatggttat
acaattgttgtacgaatagcaggatccagccctgatctgaagcctgtccaggagttcttt
ggacttgcctttccaggaagtgttctaaaagagaagcaccggaacatgctacagtaccag
cttccatcttcattatcttctctggccaggatattcagcatcctttcccagagcaaaaag
agactccacatagaagactattctgtttctcagacaacacttgaccaagtatttgtaaac
ttcgccaaggaccaaagtgatgatgaccacttaaaggacttgtcattacacaagaaccag
acagtagtagatgtcgcagttctcacatctttcctccaggatgagaaagtgaaagaaagt
tacgtatga
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integrated database retrieval system
