Canis lupus familiaris (dog): 481706
Help
Entry
481706 CDS
T01007
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X8
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
481706 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfa03041
]
481706 (DHX16)
Enzymes [BR:
cfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
481706 (DHX16)
Spliceosome [BR:
cfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
481706 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
Cas3-like_C_2
GIPC1_GH2
Motif
Other DBs
NCBI-GeneID:
481706
NCBI-ProteinID:
XP_038535138
Ensembl:
ENSCAFG00000000427
VGNC:
39940
LinkDB
All DBs
Position
12
Genome browser
AA seq
1041 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEDFVQRLRDTDTLDLSGPAR
DFALRLWTKVPRKAVVEKPARAAEREAQALLEKNRSYKLLEDSEESSEETVGRTGSSLQK
KRRKRKHLRKKCQEEEEEEEEISEKGRRKTGGSKQTEKPESEDEWERTERERLQDLEERD
AFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKRE
REKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATNRYH
MPEETRGQPSRAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEE
EETIEFVRATQLQGNEEPSGPSPPSQAQQKESVQAVRRSLPVFPFREELLAAIADHQVLI
IEGLRNIFSKGKTSSLVIQGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYS
IRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVA
RFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVL
QIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIF
QPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASAN
QRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDF
LDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEI
LTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYE
NFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSGYR
TVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKE
LEDPHSKKMPKKIGKTREELG
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggctgggctggagcgctgggtgcaggacgagctgcactcggtgctgggg
ctgagcgagcggcacgtagcccagtttttgatcggtaccgcgcagcgatgcgcctcggcc
gaggacttcgtacagcgcctgcgagacaccgatactctggacctcagcggaccggctcgc
gacttcgccttgagactctggaccaaggtaccacggaaggcggtggtagaaaagccagct
cgggcggccgagcgagaggcccaagccctgctggaaaagaaccgatcctataagttgctg
gaagacagtgaggagagtagtgaggagaccgtaggtagaactgggagcagtctccaaaag
aagcgtagaaaacggaaacacctcaggaagaaatgtcaggaggaggaagaagaggaggaa
gagatttccgagaaagggagaagaaagacaggggggagtaaacagactgagaagccagaa
tctgaggatgagtgggagcggaccgagcgagagcgccttcaggacctggaggaacgtgat
gcctttgctgagcgggttcggcagcgagacaaggatcggactcgcaatgtcctggagcgg
tcagacaagaaggcttatgaagaggctcagaagcgcctcaagatggctgaggaagaccgg
aaagccatggttcccgagctgcggaagaaatcacgccgcgagtacttggctaagcgggag
cgagagaagcttgaggacctagaggctgagctggctgatgaggagttcctttttggggat
gtagagctgagccgacatgagcggcgggagctcaaatacaagcggcgagtgcgggatctg
gcccgagagtaccgggcggctggggagcaggagaagctggaggccaccaatcgttaccac
atgcccgaggagacccgaggccagccatcacgagctgtggatctagtggaggaggaatca
ggcgcccctggggaggagcagcgacgctgggaggaggcccggctaggggcagcatctctg
aagtttggggcccgagatgctgcctcccaggagcccaagtatcagctggtgctggaggaa
gaggagaccattgagtttgtccgggccactcagctccagggcaacgaggagccatcaggc
ccatcgcctccatcccaggcccagcagaaggagtccgtgcaggctgtccgccgcagcctc
ccagtgtttccattccgcgaggagctcttggctgccattgctgatcatcaggtcctcatc
atcgagggcctcaggaatatatttagcaaagggaaaacctcttctcttgtcattcaggga
tacacaaaaaagggaatgaagattgcctgtacccagccccggagagtggcagccatgagt
gtggctgcccgagtggcccgggagatgggtgtgaagcttgggaatgaggttggctacagc
atccgctttgaggactgcacatcagaacgaactgtcctccgctacatgacagatgggatg
ctcctccgggagttcctctctgaacctgaccttgcaagttacagtgtggtaatggtagat
gaggctcatgaacgaaccctacacacagacattctcttcgggttaatcaaggatgttgct
cgtttccggcctgagctgaaagtcttggtggcttcagccacactggacactgcccgtttc
tccaccttctttgatgatgctcctgtcttccgaatccctggacgcaggtttccagttgac
atcttctataccaaggctccagaggctgactacctagaagcttgtgtggtgtctgtgctg
cagatccatgtgacccagccccctggggatatcctggtgttcctgacaggacaggaggag
attgaggctgcctgtgagatgctccaagatcgctgccgccgcctgggctccaaaatccgg
gagctcttggtgttacccatttatgccaacctgccttctgacatgcaggcccgtatcttc
cagcccacacccccgggggcacgaaaggtggttgtggcaacaaacatcgctgagacgtca
ctcaccattgaaggcatcatttatgtgctggatccagggttctgtaagcagaagagctac
aaccctcgcacaggcatggaatccctcactgtcacaccctgcagcaaggcctcagccaat
caacgagctggtcgggcgggtcgggtggctgctgggaagtgcttccgcctgtatactgcc
tgggcctaccagcatgagctggaggaaaccacagtgcctgagatccagaggaccagcctg
ggcaatgttgtgttgctgctcaagagcttagggatccatgacctaatgcactttgatttc
ctggaccctccaccatatgagaccctgctgctggctttggagcagctgtatgctctggga
gccctcaaccaccttggggagctcaccacgtctggtcgaaagatggcagagctaccggtg
gatcccatgctatctaaaatgatcttggcctctgagaagtatagctgttcggaagagatt
ctgacagtggctgccatgctgtctgttaataactctatcttctaccgacccaaggacaag
gtagttcatgctgacaacgcccgtgtcaactttttcctccctggtggagaccacctggtt
ctgctgaacgtctatactcagtgggctgagagtggctactcttctcagtggtgctatgag
aacttcgtacagttcagatcaatgcgccgagcccgggatgtgcgagaacagctggagggg
ctcttggaacgcgtagaagttggtctcagctcttgccagggggactatatccgtgtacgc
aaggccatcacagctggttacttttaccacacggcccggttgactcgtagtggctatcgc
acagtcaaacagcagcagacagtgttcattcaccccaactcctccctctttgaggaacag
ccacgctggttactctaccatgaacttgtcttgaccaccaaggagttcatgagacaggta
ttggagattgaaagcagttggcttctggaggtggctcctcattattataaagccaaggag
ctagaagatccccattctaagaaaatgcccaaaaaaataggcaagacacgggaagagcta
ggataa
DBGET
integrated database retrieval system
