Canis lupus familiaris (dog): 481873
Help
Entry
481873 CDS
T01007
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04151
PI3K-Akt signaling pathway
cfa04510
Focal adhesion
cfa04512
ECM-receptor interaction
cfa04820
Cytoskeleton in muscle cells
cfa04974
Protein digestion and absorption
cfa05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
481873 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
481873 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
481873 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
481873 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
481873 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
481873 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cfa00535
]
481873 (COL9A1)
Proteoglycans [BR:
cfa00535
]
Extracellular matrix (ECM) proteoglycans
Others
481873 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
DUF4882
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
481873
NCBI-ProteinID:
XP_038540886
Ensembl:
ENSCAFG00000002589
VGNC:
49782
LinkDB
All DBs
Position
12:complement(32622570..32712754)
Genome browser
AA seq
921 aa
AA seq
DB search
MKTQWKIPVFFFVCSFLGSWTSAAVKRRPRFPVNSNSNGGNELCPKVRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSTALQVAYKLGNNADFRIPTRDLYPSGLPEEYSFLTTFRMT
GSTLEKNWSIWQIQDSSGKEQVGVKINGQTKSVAFSYKGVDGSLQTATFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIQSLPIKPRGQIDVDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPRRETCHELPVRVTPSETADQRGPPGVQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEPGKPGAPGKPGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFPGRGIP
GPPGPPGAAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPNSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGEQGEVGAQGPPGAQGLRGITGIVGAK
GEKGARGIDGEPGPQGIPGAPGDQGQRGPPGEIGPKGDRGPQGSRGIPGLPGTKGDTGLP
GVDGREGIPGMPGTKGEPGKPGPPGDAGLQGLPGVPGIPGAKGVAGEKGNTGAPGKPGQL
GNSGKPGQQGPPGEVGPRGPRGLPGSRGEVGPVGPPGLPGKLGSLGSPGLPGLPGPPGLP
GMKGDRGVVGEPGPKGERGSSGEEGEAGERGELGEIGLPGPKGSVGNPGEPGLRGPEGSR
GLPGEEGPRGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVMQEHLAEMAAS
LKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGIKGPPGALGLRGPKGDLGER
GERGPPGRGPKGLPGATGLPGEPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPPGF
CEPASCTMQAGQRAFSKGPDQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacagtggaaaattccagttttcttctttgtatgcagttttctgggatcttgg
acatctgcagctgtcaaacgtcgcccaagattccctgttaattcaaattctaatggtgga
aatgaactctgtccaaaggtcaggattggccaagatgatttgccagggtttgacttgatt
tctcagttccaggtagataaagcagcatctagaagagctattcagagggtagtgggatca
actgcattacaagtggcttacaaactgggaaataatgcagacttcaggattccaacaagg
gatttatatcccagtggtctgcctgaagaatactcctttttaactacctttcggatgact
ggaagcacacttgaaaagaactggagcatttggcagattcaggattcctcagggaaggag
caagttggcgtgaagattaatggccaaacaaaatctgttgcattttcatacaagggagtg
gatggaagtctccaaactgcaactttttcaaatttgccttctttgtttgattcccaatgg
cataagatcatgattggtgtggaaaggagtagtgctactctttttgttgattgcaacagg
attcaatccttacctataaagccaagaggccaaattgatgttgatggctttgctgtgctg
ggaaaacttgcagataatcctcaagtttctgttccgtttgaacttcagtggatgctgatt
cattgtgacccactacgccccaggagagagacttgccatgagctgccagttcgggtaact
cccagcgagaccgcggaccagagaggtcccccgggcgtgcaggggcccccgggccccccc
ggcccccctggagttccaggcatcgatggcatcgacggtgaccgaggtcccaagggtccc
ccgggccccccgggtcctgctggagaaccgggcaagccaggagctccgggcaagccgggc
acgccgggcgccgacggattaacaggacctgatggatcccctggttctgtcggaccaaga
ggacaaaaaggagaacctggtgttcctggatctcggggatttccaggccgtggtattcct
gggcctcctggccctcctggggcagcagggcttcctggagagcttggccgtgttggacca
attggtgaccctgggagaagaggaccacctggcccacctggccctccaggacccagtgga
accattggctttcatgatggagatccattgtgtcccaattcctgtccaccaggtcgctca
ggatatccaggtttaccaggcatgaggggtcataaaggggctaaaggagaaattggtgaa
cctggaagacaaggtcacaagggtgaagaaggtgaccagggggaacagggagaagttgga
gctcaaggacctccaggagctcaaggattacgaggcatcactggcattgttggggccaaa
ggggaaaaaggtgctcggggcatagatggagaacctgggcctcaagggattcctggtgca
cctggtgatcaaggacagcgaggacctccaggagaaataggtcccaagggagatagaggg
cctcaaggttctagaggaattcctggcctccctgggaccaaaggagacacgggcttgcca
ggtgtggatggccgtgaagggatacctggaatgcccggaacaaagggtgaaccagggaag
cctgggcctcctggtgatgcaggattgcagggcttacctggtgtacctggaattcctggt
gcaaagggtgttgctggtgaaaagggtaacacaggtgctccagggaagcctggtcaactg
gggaattcaggcaaaccgggtcaacaggggcctccaggagaggtgggacctcgaggacct
cgggggcttcctggcagtagaggggaagtaggaccagtgggacccccaggactaccaggt
aaactgggttctcttggtagtcctggcctccctggcttgcctggcccccctggacttcct
ggaatgaaaggtgacaggggagtagtcggtgaacctggtccaaaaggtgaacggggttcc
tctggtgaagaaggcgaagcaggagaaaggggtgaacttggagagataggattacctggg
ccaaagggatctgtgggtaaccctggggagcctggcttgagggggcctgaaggaagtcgg
gggcttcctggagaggaaggacccagaggaccgcctggaccacgaggtgtgcagggagag
cagggtgccactggcctgcccggcatccagggtcctccaggtagagcaccaacagatcag
cacattaagcaggtttgcatgagagtcatgcaagagcatcttgctgagatggctgctagt
ctcaagcgaccggactcaggagcctctggactccctggaaggcctgggccccctggtccc
ccgggacctcctggagagaatggtttcccaggccaaatgggacttcgtggcctcccaggc
attaaaggcccccctggtgctcttggtttgagggggcctaaaggtgacttgggagaaagg
ggggaacgtggccctccaggaagaggtcctaagggcttgcccggagctacaggtctccca
ggtgagcctggtcctgccagctacgggaggaatggccgggatggtgaacgaggcccccca
ggggtggcaggaattcctggtgtacctggtcctccaggccctcctggccctcctgggttt
tgtgagccagcctcctgcaccatgcaggctgggcaacgggcgtttagcaaagggcctgac
cagtga
DBGET
integrated database retrieval system
