Canis lupus familiaris (dog): 481881
Help
Entry
481881 CDS
T01007
Symbol
COL12A1
Name
(RefSeq) collagen alpha-1(XII) chain isoform X7
KO
K08132
collagen type XII alpha
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
481881 (COL12A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cfa00535
]
481881 (COL12A1)
Proteoglycans [BR:
cfa00535
]
Extracellular matrix (ECM) proteoglycans
Others
481881 (COL12A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
Ig_DSCAM-DSCAML_C
VWA_2
Pur_ac_phosph_N
Collagen
Interfer-bind
DUF4998
Copine
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
481881
NCBI-ProteinID:
XP_005627591
Ensembl:
ENSCAFG00000002702
VGNC:
39458
LinkDB
All DBs
Position
12:complement(36591487..36714157)
Genome browser
AA seq
3122 aa
AA seq
DB search
MRTGLPPALAALGAALLLSSIEAEVDPPSDLNFKIIDENTVHMSWARPADPIVGYRITVD
PTTDGPTKEFTLAASTTETLLSDLIPEIEYVVTITSYDEVEESVPVIGQLTIQTGGPTKP
GEKKPGKPEIQKCSVSAWTDLVFLVDGSWSVGRNNFKYILDFIGALVSAFDIGEEKTRVG
VVQYSSDTRTEFNLNQYYRTDELLAAIKKIPYKGGNTMTGDAIDYLIKNTFTESAGARVG
FPKVAIIITDGKSQDEVEIPARELRNIGVEVFSLGIKAADAKELKQIASTPSLNHVFNVA
NFDAIVDIQNEIISQVCSGVDEQLGELVSGEEVIEPPSNLVATEVSSKYIKLSWSPSPSS
VTGYKVLLTPMTAGSRQHALSVGPQTTTLSVRDLSADTEYQISISAMKGLTSSEPVSIME
KTQPMKVQVECSRGVDIKADIVFLVDGSYSIGIANFVKVRAFLEVLVKSFEISPNRVQIS
LVQYSRDPHTEFTLKKFTKVEDIIEAINTFPYRGGSTNTGKAMTYVREKIFVPSKGSRGN
VPKVMILITDGKSSDAFRDPAIKLRNSDVEIFAVGVKDAVRSELEAIASPPAETHVFTVE
DFDAFQRISFELTQSICLRIEQELAAIKKKAYVPPKDLSFSETTSYSFKANWSPAGENVF
SYHITYKEATGDDEVTVVEPASSTSVVLNNLKPETLYLVNVTAEYEDGFSVPLTGEETTV
EVKGAPRNLKVTDETTDSFKITWTQAPGRVLRYRIIYKPVASGESKEVTTPANQRRITLE
NLTPDTKYEVSVIPEYFSGPGSPLTGNAATEEVRGTPRDLRVSDPTTSTMKLSWTRAPGK
VKQYLVTYIPAAGGETQEVTVRGDTTSTVLRGLNEGTQYALSVTALYASGAGDALYGEGM
TLEERGSPKDLVTKDITDTSIGAYWTSAPGMVRGYRVSWKSLYDDIETGEKSLPGDAIHT
VIENLQPETKYKVSVFAVYSSGEGEPLNGEATTELSQDSKTLKVDEETENTMRVTWKPAP
GKVINYRVVYRPRGGGRQMVAKVPPTVTSTVLKRLQPQTTYDITVLPMYKTGEGKLRQGS
GTTASRFKSPRNLKTSDPTMSSFRVTWEPAPGEVKGYKVTFHPTGDDRRLGELVVGPYDN
TVVLEELRAGTTYKVNVFGMFDGGESSPLVGQEMTTLSDTTVMPILSSGMECLTRAEADI
VLLVDGSWSIGRANFRTVRSFISRIVEVFEIGPKRVQIALAQYSGDPRTEWQLNAHRDKK
SLLQAVANLPYKGGNTLTGMALNFIRQQNFRTQAGMRPRARKIGVLITDGKSQDDVEAPS
KKLKDEGVELFAIGIKNADEDELKMIATDPDDTHAYNVADFESLSKIVDDLTINLCNSVK
GPGDLEAPSNLVISERTHRSLRVSWTPPSDSVDRYKVEYYPVSGGKRQEFYVSRLESSTV
LKDLKPETEYVVNVYSVVEDEYSEPLKGTEKTLPVPVVSMNIYDISPTTMHVQWQPVGGA
TGYTLSYEPINGTEPTKPKEMRVGPTVNDVQLTDLSPNTEYAVTVQAALHDLTSEPVTAR
EVTLPLPKPRDLRLRDVTHSTMNVLWEPAPGKVRKYIVRYKTPEEDVKEVEVDRSRTSTP
LRDLFSQTLYTVDVSAIYDEGESPPVTAQETTRTVPAPTNLKITEVTPESFRGTWDHGAS
DVSLYRITWAPFGSSDKMETILNGDENTLVFENLNPNTLYEVSVTAIYPDESESDDLTGS
ERTPRLIPLTTQAPKSGPRNLQVYNATSNSLTVKWDPASGRVQKYRITYQPSTGEGNEQT
TTIGGRQNSVVLQKLKPDTPYTITVSSLYPDGEGGRMTGRGKTKPLNTVRNLRVYDPSTS
TLNVRWDHAEGNPRQYKLFYAPTAGGPEELVPIPGNTNYAILRNLQPDTPYTVTVVPVYT
EGDGGRTSDTGRTLVRGLARNVQVYNPTPNSLDVRWDPAPGPVQQYRIVYSPVAGTRPSE
SIVVPGNTRTVHLERLIPDTPYSVNIVALYSDGEGNPSPGQGRTLPRSGPRNIRVFGETT
NSLSVAWDHADGPVQQYRIIYSPTVGDPIDEYTTVPGRRNNVMLQPLQPDTPYKITVIAV
YEDGDGGHLIGNGRTVGLLPPQNIHISDEWYTRFRVSWDPSPSPVLGYKIVYKPVGSNEP
MEAFVGEMTSYTLHNLNPSTTYDVNVYAQYDSGLSVPLTDQGTTLYLNVTDLKTYQIGWD
TFCVRWSAHRAATSYRLKLSPADGTRGQEITVRGSETSHCFTGLSPDADYGVTVFVQTPN
LEGPGVSVKEHTTVKPTEAPTEPPTPPPPPTIPPARDVCKGAKADIVFLTDASWSIGDDN
FNKVVKFIFNTVGAFDEISPAGIQVSFVQYSDEVKSEFKLNTYNDKAQALGALQNIRYRG
GNTRTGKALTFIKEKVLTWESGMRKNVPKVLVVVTDGRSQDEVKKAALVIQQSGFSVFVV
GVADVDYNELANIASKPSERHVFIVDDFESFEKIEDNLITFVCETATSSCPLIYLDGYTS
PGFKMLEAYNLTEKNFASVPGVSLESGSFPSYSAYKLQKNAFVNQPTADLHPNGLPSSYT
IILLFRLLPETPTDPFAIWQITDRDYKPQVGVIADPSSKTLSFFNKDIRGEVQTVTFDTD
EVKTLFYGSFHKVHVVVTSKSVKIYIDCYEIIEKDIKEAGNITTDGYEILGKLLKGERKS
ATFQIQSFDIVCSPVWTSRDRCCDIPSRRDEAKCPALPNACTCTQDSVGPPGPPGPAGGP
GAKGPRGERGISGAVGPPGPRGDTGPPGPQGPPGPQGPNGLSIPGEQGRQGMKGDAGEPG
LPGRTGTPGLPGPPGPMGPPGDRGFTGKDGAMGPRGPPGPPGSPGSPGVTGPSGKPGKPG
DHGRPGPSGLKGEKGDRGDIASQNMMRAVARQVCEQLISGQMSRFNQMLNQIPNDYHSSR
NQPGPPGPPGPPGSAGARGEPGPGGRPGFPGTPGMQGPPGERGLPGEKGERGIGSPGPRG
LPGPPGPQGESRTGPPGSTGSRGPPGPPGRPGNSGIRGPPGPPGYCDSSQCASIPYNGQG
YPEPYVPEGGAYLPEREPFIVPVEPERTPDEYEDYGADEPGDEHPPHARWRRALPRGPGQ
RT
NT seq
9369 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccgggcttcccccagcgcttgccgccctgggcgcggccctgctcctgtcttcc
atcgaggcagaagttgacccaccttcagacttgaattttaaaataatagatgaaaatact
gttcatatgtcatgggcaagaccagctgatccaattgtgggttacagaataacagtggac
cctacaacagatgggcccactaaagaatttacccttgcagctagtaccactgaaacttta
ttatcagaccttatacctgaaatagagtatgtggtaacaatcacttcatatgatgaagta
gaagagagtgttccagttataggacaattaacaattcaaacaggtggtcccacaaagcca
ggggagaagaaacctggaaaaccagagatacaaaaatgctctgtcagtgcctggactgat
ctagtgtttctcgtggatggctcatggagtgtgggaagaaataattttaagtatatttta
gactttattggtgctcttgtgtctgcttttgacattggagaagaaaagacaagggttgga
gttgttcagtacagctctgataccaggaccgaatttaacttaaatcagtactaccgaaca
gatgagcttcttgctgcaattaaaaaaattccatacaaaggtggcaacacaatgacgggg
gatgccattgattacttaattaaaaatactttcacggaatctgctggagcaagagttggc
tttcctaaagtggcaattattattactgatggcaaatcccaggatgaagtggaaattcca
gcaagagagcttcgaaatataggggttgaagttttctctttgggcattaaagctgcagat
gcaaaagaactcaaacaaattgcctccacaccttcattaaaccatgtcttcaatgtggcc
aactttgatgcaattgtggatattcagaatgagataatctcccaggtgtgctccggtgta
gatgaacaactgggtgaattggttagtggagaagaagttattgaacctccttcaaatttg
gttgctacggaagtctcatcaaaatatattaagctaagttggagtccatctcctagctca
gtaactggttataaagtcctccttacaccaatgaccgctggaagccgacagcatgctctt
agtgtggggcctcagaccaccacactcagtgttcgtgacctctcagcagacacagaatac
cagatcagtatttctgctatgaagggactcacatccagtgaacctgtttcaataatggag
aagactcagcccatgaaagttcaagtggaatgctcacgtggtgtggatataaaagccgat
attgtgtttttggttgatggttcctatagcatcgggattgcaaactttgttaaagttaga
gcctttctggaagttctcgtaaaaagttttgagatttcaccaaatagggtacagataagt
cttgtccagtacagccgggatcctcatactgagttcactttgaaaaaattcaccaaagtg
gaagatataattgaagcaataaacaccttcccctacagaggaggatctacaaacactggg
aaagcaatgacttatgtcagagagaaaatatttgtgcctagcaagggttcaagaggcaac
gtaccaaaggtcatgattcttatcactgacgggaaatcttcagatgctttcagagatcct
gctataaaactaaggaattcagatgtggaaatctttgcagttggtgtgaaggatgctgtt
cgctcagagttagaagctattgcctctcctcctgctgagacccatgtgttcacagtggaa
gattttgatgcttttcagagaatatcttttgaactcacacagtctatctgccttagaatt
gagcaagaattggcagctataaagaaaaaagcttatgtgcctccaaaggatcttagtttt
tctgagacaacttcttacagtttcaaagctaactggtctcctgctggagaaaatgttttc
tcataccacatcacctacaaggaagctactggagatgatgaggtcacggtggtagagcca
gcgtcaagtaccagtgttgttctcaacaacctgaagccagagaccctgtacttagttaat
gtgactgcagagtatgaggatggcttcagtgttcccttaactggagaggagaccactgtg
gaagtaaaaggagcacctcgaaacctaaaagtgacagatgaaactacagacagctttaaa
atcacctggactcaagctccagggagagttttaaggtaccgaattatatataaaccagtt
gctagtggagaaagcaaagaagttaccacccctgccaatcagaggaggataacgctcgag
aacctgactccagacacaaaatatgaagtatctgtaattcctgaatatttctcaggacct
ggctccccgttgactggaaatgcagccactgaagaagttagagggaccccaagagactta
agagtttctgaccctacaacatcaactatgaaattatcttggactcgagcaccagggaaa
gtgaaacagtatctcgtcacatacatcccagcggcagggggtgaaactcaagaggtcact
gtgagaggagatacaaccagtactgtgctgagaggattaaatgaagggacacaatacgcc
ttatctgtgacggccttgtatgcatccggggctggagatgccctttatggcgaaggaatg
accctcgaagaacgtggttcacccaaggatttggttactaaagatatcacagacacatca
attggggcttattggacatcagctccaggaatggttcgaggttacagggtctcatggaaa
tcactttatgatgatattgagactggagagaaaagtcttcccggagatgcaattcatacc
gtgatagaaaatcttcagccagagaccaaatataaggtttcagtctttgcagtttacagc
agtggagaaggagaacctttgaacggagaagccacaactgaattatcccaagattcaaaa
accttgaaagtggatgaagaaacagaaaacacaatgcgagttacctggaaaccagcaccc
gggaaagtcatcaactaccgggttgtgtatcgcccccgtgggggtgggagacaaatggtg
gccaaagtgccacccacagtcacctcaacagtgttaaagcgacttcaaccccagactaca
tatgacattacagttctcccaatgtataagacaggagaaggaaagcttaggcaaggatcg
ggaacaacagcttctcgatttaagtcacccagaaatctcaaaacatctgacccaaccatg
tcaagtttccgagtgacctgggagcctgcccctggggaagtaaagggttataaagtcacc
ttccaccctacaggggacgacagaaggctgggggagttagtggttggaccatatgacaat
acagttgttttggaggaacttagggcaggtaccacctataaagtaaatgtttttggaatg
tttgatggaggagaaagttcgccactcgttggacaagaaatgacaaccctttctgacaca
actgtaatgccaattttatcctctgggatggagtgtctcaccagagcagaagcagatatt
gtgttgctggtggatggatcatggagcattggccgggcgaactttaggaccgtgaggagt
ttcatctctcgcattgtggaagtctttgagattggtcccaaaagagtacagattgccctt
gctcagtatagtggggaccccagaacagagtggcagctaaatgctcacagagacaagaag
agcttgttgcaagctgtggcaaacttgccatacaaaggaggcaatactctcacaggcatg
gctttgaatttcattcggcaacaaaacttcagaacccaagctggcatgaggcctcgagct
cgaaaaattggtgttctcatcactgatggaaaatcacaagatgacgttgaggcaccttca
aagaaactcaaggatgaaggcgtggagctgtttgctattggtattaaaaatgctgatgag
gatgaattaaagatgattgcaacagatcctgatgatacccatgcatacaacgtggcagat
tttgagtcactctctaagattgtagatgacctcactattaacttatgtaatagtgtcaaa
ggtccaggtgacttggaagcaccttccaacttagttatttctgaacgaacccatcgttct
ctcagagtgagctggacacctccttctgacagtgtggataggtataaggtggaatactac
ccagtttctggagggaaacgtcaagaattttatgtgagccgactggaaagtagtacagta
ctgaaagatctgaagcctgaaactgagtatgttgttaatgtgtattctgtggtggaagat
gaatatagtgaacctctgaagggcacagaaaaaaccttaccggtccctgtggtcagcatg
aatatttatgatattagccctaccaccatgcatgtgcagtggcagccggtgggaggagct
actggctataccttgtcctatgaacccatcaatggcacagaaccaacaaagcccaaagag
atgcgtgtggggccgacagtgaatgacgtgcagctgactgatctttcccccaacacggaa
tatgcagtcacagtccaggctgctttgcatgacctcaccagtgaacctgtcacggctcgg
gaagttacattgcctttacccaaacctcgagatctgagactcagagatgtgactcacagt
accatgaacgttttatgggaacctgcacctggaaaagtgcgtaaatacatcgttcgctac
aaaacaccagaagaggatgtcaaagaggtggaggtagacaggtcgcggaccagcacccct
ctcagagacctcttctcacaaaccctgtacacagtagacgtttctgccatatatgatgag
ggggagtctcccccagtgactgctcaagaaactacccgcactgtgccagccccaacaaac
ctgaagataactgaagtaacaccagagagtttccgagggacttgggatcatggagcttca
gatgtgtccctctacagaataacttgggcaccatttggaagctcagataagatggagacc
atcttaaatggagatgaaaatactttggtgtttgaaaacctgaacccgaacacactctat
gaagtttctgttactgccatttatcctgatgagtcagaaagcgatgacctgactggcagt
gagcgcacacctcgtttgatacccttaacaacacaagctccaaaaagtggcccacgaaac
cttcaggtgtacaacgcaacttctaacagcttgactgttaagtgggatcccgccagtggt
cgtgtgcagaaatacagaatcacttaccagccttcaacaggagaaggcaatgagcaaacg
accacaatagggggaaggcagaacagtgttgtcctacagaaactgaagcccgacacccct
tacacgatcactgtgtcctccctgtatcctgatggtgaaggaggtcggatgacaggaaga
ggcaagaccaaacctctgaatactgtgaggaacctcagagtgtatgacccttctaccagc
accttgaatgttcgctgggaccatgcagagggaaaccctcgtcagtacaagctcttctat
gcaccaacagcaggtggtccagaggaactggtaccaatccctgggaataccaattatgcc
attcttaggaatctgcagccagataccccgtacaccgttacagtagttcctgtttatact
gaaggtgatggaggacgcacatcagatactggaaggacattggtgagagggctggcaagg
aatgtccaagtgtacaatccgacgccaaatagcctagatgtccgctgggaccctgcgcct
gggcctgtgcagcagtatcggatcgtgtattctcctgtggctggcacaagaccttcggaa
tctattgtggtgccaggaaacacgcgcacagtgcacctggagcggctgattcccgacaca
ccctactctgtgaacatcgtagctctctactcggatggagaggggaatcccagccctggc
cagggccgaacgctgccacgaagtggaccaagaaatataagagtctttggggaaacaacc
aacagcctctctgtagcctgggatcatgctgatgggccggttcagcaatacaggatcatt
tattctcccactgttggcgatccaattgatgaatataccacggtcccaggcagaaggaat
aatgtgatgctgcagcccctgcaacctgatactccatataagattactgttattgctgtt
tatgaagatggagatggaggccatcttatagggaatggaagaaccgtgggactgcttcca
cctcaaaacatacacatctctgatgaatggtatacaagattcagggtatcctgggatcct
tcaccttctccggttcttggatataaaattgtgtataagccagtgggttccaatgagccc
atggaagcttttgttggagaaatgacatcatatacattacacaatctcaatcctagcacc
acctatgatgtaaatgtttatgctcagtatgattctggactcagtgtccccctgacggat
caaggcactacattgtatttaaatgtgacagatctgaaaacctaccagattgggtgggat
acattctgtgttagatggtcagctcaccgggcagccacctcctacaggctaaaactaagc
cccgcagatggaaccagaggacaagaaattacagtgcgtggatcagaaaccagtcactgc
ttcactggtctttcaccagacgctgattatggcgtcaccgtttttgtgcagacaccaaat
ctcgagggaccaggagtctctgtcaaggaacataccactgtaaaaccaacagaagcccct
acggagccacccacacctcctccccctcctacaatcccaccagcccgggatgtatgcaaa
ggggccaaggcagatattgtattcttgactgatgcctcctggagtatcggggatgataat
tttaacaaagttgtaaaattcatcttcaatactgtgggagcctttgatgaaattagccct
gctggaattcaggtctcgtttgtgcagtacagtgatgaggtcaagtctgagttcaagttg
aacacatataacgacaaggcccaagccctgggggccctccagaatattagatacagagga
ggaaacacaagaacaggcaaggctctcacatttatcaaggagaaggtcttgacctgggag
agcggcatgaggaagaatgtccccaaggtgctggttgtggtcacagatggccggtcacag
gatgaggtcaagaaggcagctttggtcatccagcagtcagggttcagtgtctttgtagtt
ggagtggctgacgttgactacaatgagcttgccaatattgccagcaaaccaagcgaacgg
cacgtgttcattgttgatgactttgaatcttttgagaagattgaggacaacctcattaca
tttgtctgtgaaactgctacttcaagttgtcctctcatttatttggatggctacacctca
ccaggttttaagatgcttgaagcatacaacctgacagaaaagaattttgcttctgtacca
ggagtctctttggagtcagggtctttccccagctactcagcttacaagcttcagaagaat
gcttttgtgaaccagcctacagcggatctacatccaaatggactcccttcttcatacacg
attatattattgttcagacttctcccagaaactcccactgacccttttgcaatttggcaa
atcacagatagggactacaaaccacaagttggagtgattgcagatccttctagcaagaca
ttgtcattctttaacaaggatataagaggtgaggtgcaaactgttacatttgacacagat
gaagtgaagacattattctatggaagttttcacaaggttcatgtcgtagtgacctcaaaa
agtgttaagatttacatcgactgctatgaaattatagaaaaagatatcaaggaagctgga
aatattacaactgatggttatgaaattcttggaaaacttcttaaaggggaaagaaaatca
gccacattccaaatccagagtttcgatattgtttgcagtccggtgtggaccagtagagac
agatgctgtgatattccctctaggagagatgaagcaaaatgccctgctcttccaaatgct
tgcacatgtacacaggacagcgttggacctccaggtccaccgggccctgcgggaggacct
ggtgctaaaggtcccagaggtgaaagaggaatcagcggggcagttgggcctcctggccct
cgtggagatacaggtcctccaggccctcagggacccccaggcccccagggacccaacgga
ctctctattcctggagaacaaggtcgccaggggatgaaaggtgatgctggagagccaggg
cttcccggccgaacaggaaccccaggattacctggcccaccaggaccaatgggacctcca
ggagatagaggctttactggaaaagatggtgcaatgggacccaggggcccccctgggcca
ccgggaagcccaggctccccaggagtcacaggaccaagtgggaaaccaggaaaacccgga
gaccatggcagaccaggtccatctggattgaaaggagagaaaggcgatagaggagacatt
gcttcccagaacatgatgcgagcagttgcaagacaagtctgtgaacaattgataagtggt
cagatgagcagattcaatcagatgctgaatcagattccgaatgattatcactccagtcgc
aaccaaccaggcccaccaggccccccaggcccccctggcagcgcaggagccagaggagaa
ccaggacctggggggcgaccaggcttccccggcactccagggatgcagggacccccaggt
gaacgaggtttgccaggagagaaaggcgaaaggggtattgggtcaccaggacctcgaggg
ctgcctggccccccaggtcctcaaggagaatccagaacgggtccaccagggtccacaggt
tcaagaggtccccctggccccccgggtcgtcctggaaactcaggtatccgaggcccccca
ggtcctcctggatactgtgactcatcccagtgtgccagcatcccatacaatgggcaaggc
tatccagagccgtacgtgcccgagggcggggcctacctgcccgagcgcgagcccttcatc
gtgccggtggagcccgagcggacgcccgacgagtacgaggactacggcgccgacgagcct
ggcgacgagcaccctccccacgcgcgctggcggcgcgccctgccccgcggccccgggcag
cgaacctga
DBGET
integrated database retrieval system
