Canis lupus familiaris (dog): 482382
Help
Entry
482382 CDS
T01007
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa04621
NOD-like receptor signaling pathway
cfa05132
Salmonella infection
cfa05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
482382 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
482382 (NOD1)
05133 Pertussis
482382 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cfa04054
]
482382 (NOD1)
Pattern recognition receptors [BR:
cfa04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
482382 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
AAA_22
RsgA_GTPase
PIF1
ABC_tran
AAA_18
Motif
Other DBs
NCBI-GeneID:
482382
NCBI-ProteinID:
XP_005628733
Ensembl:
ENSCAFG00000003074
VGNC:
43877
UniProt:
A0A8C0QG94
A0A8I3PEL3
LinkDB
All DBs
Position
14:complement(42595450..42659740)
Genome browser
AA seq
964 aa
AA seq
DB search
MWAKQSLVPLAMEKQSHGEMGIIPSESHSHIKLLKINRELLVTHIRNTQCLVDNLLENDY
FSSEDAEIVGACPTQPDKVRKILDLVQSKGEEASEFLLYVLQQLEDAYVDLRPWLSEIGF
SPSELIQSKVVVNTDPVSRYTEKLRQQLGRDSKFVLCYAQKEELLLEETYTDTIAELVGL
KDESLGPLGSLACLLDRSSGVLSEQGETIFICGDAGMGKSMLLQRLQSLWAARRLDAQFK
FFFHFRCRVFSCFKEGDALCLQDLLFKHYCYPEQDPDEVFAFLLRCPHAALFTFDGLDEL
HSDFDLSGAPDTSSPWEPAHPLVLLANLLSGKLLKGAAKLLTARTGVEIPRQLLRKKVLL
RGFAPSHLRAYARRMFPDRTVQQHLLAQLEANPNLCSLCAVPLFCWIIFRCFQHFHSVWD
SAAQLPSRTVTLTDVFLLVTEVHLNRTQPTSLVQRNTRSQVETFRASRGTLRSLGQVAHG
GMEKSLFVFGQEEVQAAEFQEGELQLGFLRAVPEPGVGGDQQSYEFFHITLQAFFTAFFL
VVDDQVGTQQLLRFFQEWAPPGEAGAESCYPPLLPFQCLKGGGLAGEDPFKNKDHFRFTN
LFLCGLLSKAKEKLLRHLVPPAALRRKRKALWAHLLASLRAHLKNLPRTQSGGFSQVQAM
PTFIWMLRCIYETQSEKVGRLAAKGICANYLKLTYCNACSADCSALSFVLHHFRKRLALD
LDNNNLNDYGVRELQPCFSRLTVLRLSVNQITDSGVKVLYEELTKYKILTFLGLYSNQIT
DVGARYVARILDECKGLTHLKLGENKITSEGGKCLALAVRNSSSILEIGMWGNRIGDEGA
KAFAEALRNHPSLTNLSLAFNGISTEGGKSLAQALQRNTSLRIFWLTKNELDDEVAESLA
EMLKVNQTLKHLWLIQNQITAKGIAQLADALQKNTGITEICLNGNLIKPEEAKVFEDEKR
IVCF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcaaagcagtccctcgttcctttagccatggaaaagcagagtcacggtgagatg
gggataatcccatcagagtctcactcccacattaaattgctgaaaatcaaccgggaactt
ctggtcactcacatccgcaacacccagtgtctggtggacaacttgctggagaatgactac
ttctcttccgaagatgcggagatcgtgggtgcctgccccacgcagcccgacaaggttcgc
aaaattctggacctggtacagagcaagggtgaagaagcatctgagttcctcctctacgtg
ctccaacaactcgaagacgcttatgtggatctcaggccttggctgtcggagattggcttc
tccccgtcagagcttattcagagcaaagttgtcgtcaacaccgacccagtaagcaggtac
acggagaagctgcgacagcaactgggccgggattccaagttcgtcttgtgctacgcccag
aaggaggagctgctgctggaggagacgtacaccgacaccatcgcggagctggtgggcctc
aaggacgagagcctgggccctctgggcagcctggcctgcctcctggaccgctccagcggc
gtcctcagcgagcagggcgagaccatcttcatctgcggcgacgcgggcatgggcaagtcc
atgctgctgcagcggctgcagagcctgtgggccgcgcggcggctggacgcccagttcaag
ttcttcttccacttccgctgccgcgtgttcagctgcttcaaggagggcgacgcgctgtgc
ctgcaggacctgctcttcaagcattactgctacccggagcaggaccccgacgaggtgttc
gccttcctgctgcgctgcccgcacgcggccctcttcaccttcgacggcctggacgagctg
cactcggacttcgacctgagcggcgcccctgacacctcctccccctgggagcccgcccac
ccgctggtcctgctggccaacctgctcagcgggaagctgctcaagggcgccgccaagctg
ctcacggcccgcacgggcgtcgagatcccgcgccagctcctccgcaagaaggtgcttctg
cgcggcttcgcccccagccacctgcgggcctacgcccggaggatgttccccgaccggacg
gtgcagcagcacctgctggcccagctggaggccaaccccaacctctgcagcctgtgcgcc
gtgcccctcttctgctggatcatcttccgctgtttccagcacttccacagcgtgtgggac
agcgcggcgcagctgcccagccgcacggtgaccctgaccgatgtcttcctgctggtcacc
gaggtccacctgaacaggacgcagcccaccagcctggtgcagcggaacacgcggagccag
gtggagaccttccgtgccagccggggcaccttgcgctcgttggggcaggtggcccacggg
ggcatggagaagagcctctttgtctttggccaggaggaggtgcaggcggccgagtttcag
gagggggagctgcagctgggcttcctgcgggccgtgccagagccgggcgtgggcggcgac
cagcagtcttacgagttttttcacatcaccctccaggccttctttaccgccttctttctc
gtggtggacgaccaggtgggcactcagcagctgctcaggttctttcaggagtgggcgcct
cccggggaggcgggagcagagtcctgctatccccccctcctccccttccagtgcctgaag
ggcggtggcctggcgggggaagaccccttcaagaacaaggatcactttcggttcactaac
ctcttcctgtgcggcctgttgtccaaggccaaagagaaactcctgcggcacctggtcccc
cccgctgccctgcgcagaaagcgcaaggccctgtgggcacacctgcttgccagcctgcgg
gcccacctgaagaacctgccccgaactcagtccgggggcttcagccaagtacaggccatg
cccaccttcatctggatgctgcgctgcatctacgagacccagagcgagaaggtgggccgg
ctggcggccaagggcatctgcgccaactacctcaagctgacctactgcaacgcgtgctcc
gccgactgcagcgccctctccttcgtcctgcaccacttccgcaagcggcttgccctcgac
ctggacaacaacaatctcaacgactacggcgtgagggagctgcagccctgcttcagccgc
ctcaccgtcctcagactcagcgtaaaccagatcactgacagtggggtaaaggtgctatat
gaagagctgaccaaatacaaaattctgacgttcttaggcctgtacagcaaccagatcacg
gatgtgggagccaggtacgtcgccagaatcctggatgagtgcaaaggcctcacacacctg
aagctgggggagaacaagataacgagcgaagggggaaagtgcctcgccctggccgtgagg
aacagcagctccatcttagaaatcgggatgtggggtaacagaatcggcgatgaaggagca
aaggcctttgcagaggctctgaggaaccaccccagtctgaccaacctcagtcttgcattc
aacggcatctccacagaaggaggaaagagcctcgcgcaggccctgcagcggaacacctct
ctgagaatattctggctcaccaaaaatgaacttgatgatgaagtggcagagagcttggca
gagatgttgaaagtcaaccagacgttgaaacatttgtggcttatccagaaccagatcaca
gccaaggggattgcccagctggcggatgccttacagaagaacactggcataacggagatt
tgcctaaatggaaacttgataaagccagaagaggccaaagtctttgaagatgagaagagg
attgtctgcttctga
DBGET
integrated database retrieval system
