KEGG   Canis lupus familiaris (dog): 482986
Entry
482986            CDS       T01007                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1 isoform X1
  KO
K06257  syndecan 1
Organism
cfa  Canis lupus familiaris (dog)
Pathway
cfa04512  ECM-receptor interaction
cfa04514  Cell adhesion molecules
cfa04820  Cytoskeleton in muscle cells
cfa05144  Malaria
cfa05205  Proteoglycans in cancer
cfa05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:cfa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    482986 (SDC1)
   04514 Cell adhesion molecules
    482986 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    482986 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    482986 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    482986 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    482986 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cfa04131]
    482986 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:cfa04090]
    482986 (SDC1)
   00535 Proteoglycans [BR:cfa00535]
    482986 (SDC1)
Membrane trafficking [BR:cfa04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    482986 (SDC1)
CD molecules [BR:cfa04090]
 Proteins
  482986 (SDC1)
Proteoglycans [BR:cfa00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   482986 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1 Glycophorin_A
Other DBs
NCBI-GeneID: 482986
NCBI-ProteinID: XP_022260187
Ensembl: ENSCAFG00000003833
VGNC: 45942
LinkDB
Position
17:complement(15185971..15208368)
AA seq 317 aa
MGNAAAKGYFKAQCGCCPAPWPCPGIPQMQIVATNVPPEDQDGSGDDSDNFSGSGAGALQ
DITLSQQTPSTWKDMALLTAMPTAQEPTGADDIDSSTSILLTREGPEGGEAVLVAEAEPG
FTDREKETAHPPSETTPHPTTHRASTARATTAQGPATLHPHRDAQPDHHQISVLAEPSQL
DPHTPRVEDGGPSATERAAEDGVSTQLPAGEGSGEQDFTFDVSGENTAGTAVEPDQRNQP
PVDRGATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQ
ANGGAYQKPSKQEEFYA
NT seq 954 nt   +upstreamnt  +downstreamnt
atgggaaatgctgctgcaaagggctactttaaagctcagtgcggatgctgccctgcaccc
tggccctgccctggaatcccccagatgcaaattgtggccacaaatgtgccccccgaagac
caagatggctctggggatgactctgacaacttttctggctccggtgcaggtgctctgcag
gacatcaccttgtcacagcagaccccgtccacctggaaggacatggcacttctgacggcc
atgcccacggctcaggagcccaccggcgcggatgacatcgacagctccacgtccatcctg
ctgaccagagagggccccgaggggggagaggccgtgctcgtggcagaggcggagcctggc
ttcactgaccgggagaaggagaccgcccacccccccagcgagaccacgccgcaccccacc
actcacagggcttcgaccgccagagccaccacggcccagggccctgccaccctccatccc
cacagggacgcgcagcctgaccaccatcagatctcggttcttgcagaacccagccagctc
gaccctcacaccccgagagtggaggacggaggtccctctgccaccgagagggccgccgag
gacggagtctccactcagctcccggcgggagagggctccggggagcaggacttcaccttt
gacgtatctggggaaaacacggccgggacagctgtggagcctgaccagcggaatcaaccc
ccagtggaccgtggggccacgggggcctcacagggcctcctggacaggaaggaagtgctg
ggaggggtcatcgctggaggcctcgtggggctcatcttcgccgtgtgcctggtgggcttc
atgctgtaccggatgaagaagaaggacgagggcagctactccttggaggagcccaaacaa
gccaacggcggagcctaccagaagcccagcaagcaggaggagttctacgcctga

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