Canis lupus familiaris (dog): 483200
Help
Entry
483200 CDS
T01007
Symbol
SNX27
Name
(RefSeq) sorting nexin-27 isoform X2
KO
K17936
sorting nexin-27
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfa04131
]
483200 (SNX27)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cfa04990
]
483200 (SNX27)
Membrane trafficking [BR:
cfa04131
]
Protein recycling
Others
Others
483200 (SNX27)
Domain-containing proteins not elsewhere classified [BR:
cfa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
483200 (SNX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
USP7_C2
UBX
SNX17-31_F2_FERM
RBD
DarA_N
RA_3
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
483200
NCBI-ProteinID:
XP_005630870
Ensembl:
ENSCAFG00000043715
VGNC:
46634
UniProt:
A0A8C0YYG8
A0A8I3PPP1
LinkDB
All DBs
Position
17:60096255..60169627
Genome browser
AA seq
542 aa
AA seq
DB search
MADEDGEGIHPSAPHRNGGGGGGGGGSGLHCAGNGGGGGGGPRVVRIVKSESGYGFNVRG
QVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVD
LIRAGEKELILTVLSVPPHEADNLDPSDDSLGQSFYDYTEKQAVPISVPTYKHVEQNGEK
FVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGL
EEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQ
VYQAIAAEVGMDSTTVNYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLAIRK
WLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKMVMYLNMLR
TCEGYNEIIFPHCACDSRRKGHVITAISITHFKLHACTEEGQLENQVIAFEWDEMQRWDT
DEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKENIFQMARSQQRDV
AT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggacggggaagggattcacccttcagcccctcacagaaacggaggcggc
ggcggcggcggcggggggtccgggcttcactgcgcggggaacggcggcgggggaggcggc
ggcccgcgggtcgtacgcatcgtcaagtccgagtccggctacggcttcaacgttcggggc
caagtgagcgagggcgggcagctgcggagcatcaacggggagctgtacgcgccgctgcag
catgtgagcgccgtgctgcccgggggggcggccgaccgggccggggtgcgcaagggggac
cgcatcctggaggtgaacggcgtgaatgttgagggggcgacacacaagcaggtggtggac
ctgatccgagcaggcgagaaggaattgatcttgacagtgttatctgtacctccacatgag
gcagataacctagatcccagtgacgactcgttgggacaatcattttatgattacacagaa
aagcaagcagtgcccatatcggtccccacatacaaacatgtggagcagaatggtgagaag
tttgtggtatacaatgtttatatggcagggaggcagctgtgttctaagcggtaccgggag
tttgccatcctacatcagaacctgaagagagagtttgccaactttacatttccccgactt
ccagggaagtggccattttctttatcagaacagcaactagatgcccgacgtcgggggttg
gaggaatatctagaaaaagtgtgctcaatacgagtcattggtgagagtgacatcatgcag
gaattcctatcagaatccgatgagaactacaatggtgtctccgatgtagagctgagagta
gcactaccagatggaacgactgttacggtcagggttaaaaagaacagtactacagaccaa
gtataccaggctattgcagcagaggttggcatggacagtacgacagtgaattactttgct
ttatttgaagtgatcaatcattcctttgtacgtaagctggcacctaatgaatttcctcat
aaactctacgtccagaactacacgtcagcagtgccaggcacctgcttggccattcgaaag
tggctttttaccacagaagaagaaatcctcctaaatgacaatgaccttgctgttacctac
ttttttcatcaggctgttgatgatgtgaagaaaggttacatcaaggcagaggaaaagtcc
taccaattacagaagctgtatgaacaaaggaaaatggtcatgtacctcaacatgctaaga
acttgtgagggctacaatgaaatcatcttcccccactgtgcctgcgactccaggaggaag
gggcacgtcatcacagccatcagcatcacgcactttaaactgcatgcctgcactgaagaa
ggacagctggagaaccaggtaatagcatttgaatgggatgagatgcagcgatgggataca
gatgaagaaggaatggccttctgctttgaatatgcacgaggagagaagaagcctcgatgg
gttaaaatcttcacaccatactttaattatatgcatgaatgcttcgagagggtgttctgt
gaactcaagtggagaaaagagaacattttccagatggcgaggtcacagcagagagatgtg
gccacctag
DBGET
integrated database retrieval system
